Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC23.54■■□□□ 1.36
SNED1Q8TER0 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC23.54■■□□□ 1.36
SNED1Q8TER0 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
SNED1Q8TER0 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC23.54■■□□□ 1.36
SNED1Q8TER0 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC23.54■■□□□ 1.36
SNED1Q8TER0 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC23.54■■□□□ 1.36
SNED1Q8TER0 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC23.54■■□□□ 1.36
SNED1Q8TER0 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC23.54■■□□□ 1.36
SNED1Q8TER0 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC23.54■■□□□ 1.36
SNED1Q8TER0 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC23.54■■□□□ 1.36
SNED1Q8TER0 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
SNED1Q8TER0 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC23.54■■□□□ 1.36
SNED1Q8TER0 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
SNED1Q8TER0 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC23.54■■□□□ 1.36
SNED1Q8TER0 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC23.54■■□□□ 1.36
SNED1Q8TER0 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
SNED1Q8TER0 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC23.53■■□□□ 1.36
SNED1Q8TER0 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC23.53■■□□□ 1.36
SNED1Q8TER0 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
SNED1Q8TER0 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
SNED1Q8TER0 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
SNED1Q8TER0 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC23.53■■□□□ 1.36
SNED1Q8TER0 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC23.53■■□□□ 1.36
SNED1Q8TER0 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
SNED1Q8TER0 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC23.53■■□□□ 1.36
SNED1Q8TER0 RN7SL510P-201ENST00000581311 263 ntBASIC23.53■■□□□ 1.36
SNED1Q8TER0 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
SNED1Q8TER0 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
SNED1Q8TER0 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC23.53■■□□□ 1.36
SNED1Q8TER0 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
SNED1Q8TER0 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC23.53■■□□□ 1.36
SNED1Q8TER0 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
SNED1Q8TER0 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
SNED1Q8TER0 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
SNED1Q8TER0 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
SNED1Q8TER0 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC23.52■■□□□ 1.36
SNED1Q8TER0 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
SNED1Q8TER0 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
SNED1Q8TER0 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC23.52■■□□□ 1.36
SNED1Q8TER0 AP000347.1-202ENST00000435868 847 ntBASIC23.52■■□□□ 1.36
SNED1Q8TER0 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC23.52■■□□□ 1.36
SNED1Q8TER0 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
SNED1Q8TER0 PRR29-207ENST00000580752 458 ntTSL 3 BASIC23.52■■□□□ 1.36
SNED1Q8TER0 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC23.52■■□□□ 1.36
SNED1Q8TER0 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
SNED1Q8TER0 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC23.52■■□□□ 1.36
SNED1Q8TER0 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC23.52■■□□□ 1.36
SNED1Q8TER0 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
SNED1Q8TER0 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC23.52■■□□□ 1.36
SNED1Q8TER0 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC23.52■■□□□ 1.36
SNED1Q8TER0 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC23.52■■□□□ 1.36
SNED1Q8TER0 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC23.52■■□□□ 1.36
SNED1Q8TER0 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC23.52■■□□□ 1.35
SNED1Q8TER0 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
SNED1Q8TER0 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
SNED1Q8TER0 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
SNED1Q8TER0 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC23.51■■□□□ 1.35
SNED1Q8TER0 AP002383.4-201ENST00000442518 975 ntBASIC23.51■■□□□ 1.35
SNED1Q8TER0 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
SNED1Q8TER0 AC092597.1-201ENST00000487352 616 ntBASIC23.51■■□□□ 1.35
SNED1Q8TER0 SDHD-206ENST00000528182 754 ntTSL 3 BASIC23.51■■□□□ 1.35
SNED1Q8TER0 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC23.51■■□□□ 1.35
SNED1Q8TER0 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
SNED1Q8TER0 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
SNED1Q8TER0 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
SNED1Q8TER0 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
SNED1Q8TER0 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC23.51■■□□□ 1.35
SNED1Q8TER0 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC23.51■■□□□ 1.35
SNED1Q8TER0 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC23.51■■□□□ 1.35
SNED1Q8TER0 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
SNED1Q8TER0 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC23.5■■□□□ 1.35
SNED1Q8TER0 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC23.5■■□□□ 1.35
SNED1Q8TER0 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC23.5■■□□□ 1.35
SNED1Q8TER0 WDR6-223ENST00000627177 207 ntTSL 2 BASIC23.5■■□□□ 1.35
SNED1Q8TER0 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
SNED1Q8TER0 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
SNED1Q8TER0 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC23.5■■□□□ 1.35
SNED1Q8TER0 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
SNED1Q8TER0 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC23.5■■□□□ 1.35
SNED1Q8TER0 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC23.5■■□□□ 1.35
SNED1Q8TER0 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC23.5■■□□□ 1.35
SNED1Q8TER0 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC23.5■■□□□ 1.35
SNED1Q8TER0 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
SNED1Q8TER0 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC23.5■■□□□ 1.35
SNED1Q8TER0 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC23.5■■□□□ 1.35
SNED1Q8TER0 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC23.5■■□□□ 1.35
SNED1Q8TER0 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC23.5■■□□□ 1.35
SNED1Q8TER0 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC23.5■■□□□ 1.35
SNED1Q8TER0 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC23.5■■□□□ 1.35
SNED1Q8TER0 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC23.5■■□□□ 1.35
SNED1Q8TER0 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC23.5■■□□□ 1.35
SNED1Q8TER0 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC23.5■■□□□ 1.35
SNED1Q8TER0 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC23.5■■□□□ 1.35
SNED1Q8TER0 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC23.5■■□□□ 1.35
SNED1Q8TER0 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC23.5■■□□□ 1.35
SNED1Q8TER0 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
SNED1Q8TER0 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
SNED1Q8TER0 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC23.49■■□□□ 1.35
SNED1Q8TER0 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC23.49■■□□□ 1.35
SNED1Q8TER0 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms