Protein–RNA interactions for Protein: Q810I2

Trim50, E3 ubiquitin-protein ligase TRIM50, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim50Q810I2 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trim50Q810I2 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trim50Q810I2 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trim50Q810I2 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Trim50Q810I2 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trim50Q810I2 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Trim50Q810I2 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trim50Q810I2 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trim50Q810I2 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trim50Q810I2 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trim50Q810I2 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trim50Q810I2 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Trim50Q810I2 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Trim50Q810I2 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Trim50Q810I2 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
Trim50Q810I2 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
Trim50Q810I2 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trim50Q810I2 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Trim50Q810I2 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Trim50Q810I2 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trim50Q810I2 Gm22697-201ENSMUST00000175194 63 ntBASIC16.08■□□□□ 0.16
Trim50Q810I2 Gm18101-201ENSMUST00000215769 548 ntBASIC16.08■□□□□ 0.16
Trim50Q810I2 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trim50Q810I2 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Trim50Q810I2 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trim50Q810I2 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trim50Q810I2 Gm45244-201ENSMUST00000211328 2200 ntBASIC16.08■□□□□ 0.16
Trim50Q810I2 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trim50Q810I2 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trim50Q810I2 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trim50Q810I2 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trim50Q810I2 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
Trim50Q810I2 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Trim50Q810I2 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trim50Q810I2 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trim50Q810I2 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trim50Q810I2 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Trim50Q810I2 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Trim50Q810I2 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trim50Q810I2 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trim50Q810I2 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Trim50Q810I2 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trim50Q810I2 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trim50Q810I2 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trim50Q810I2 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trim50Q810I2 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trim50Q810I2 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trim50Q810I2 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trim50Q810I2 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trim50Q810I2 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Trim50Q810I2 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC16.07■□□□□ 0.16
Trim50Q810I2 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Trim50Q810I2 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
Trim50Q810I2 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trim50Q810I2 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Trim50Q810I2 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trim50Q810I2 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trim50Q810I2 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trim50Q810I2 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trim50Q810I2 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trim50Q810I2 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trim50Q810I2 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Trim50Q810I2 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC16.06■□□□□ 0.16
Trim50Q810I2 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
Trim50Q810I2 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trim50Q810I2 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trim50Q810I2 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC16.06■□□□□ 0.16
Trim50Q810I2 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trim50Q810I2 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC16.06■□□□□ 0.16
Trim50Q810I2 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trim50Q810I2 Gm44450-201ENSMUST00000199528 114 ntBASIC16.06■□□□□ 0.16
Trim50Q810I2 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC16.06■□□□□ 0.16
Trim50Q810I2 Gm21559-201ENSMUST00000220638 855 ntBASIC16.06■□□□□ 0.16
Trim50Q810I2 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trim50Q810I2 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC16.06■□□□□ 0.16
Trim50Q810I2 Gm8587-201ENSMUST00000076538 843 ntBASIC16.06■□□□□ 0.16
Trim50Q810I2 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trim50Q810I2 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trim50Q810I2 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trim50Q810I2 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Trim50Q810I2 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trim50Q810I2 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trim50Q810I2 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Trim50Q810I2 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trim50Q810I2 Zkscan3-208ENSMUST00000224820 5398 ntBASIC16.05■□□□□ 0.16
Trim50Q810I2 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trim50Q810I2 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Trim50Q810I2 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trim50Q810I2 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trim50Q810I2 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Trim50Q810I2 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trim50Q810I2 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Trim50Q810I2 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC16.05■□□□□ 0.16
Trim50Q810I2 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Trim50Q810I2 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC16.05■□□□□ 0.16
Trim50Q810I2 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trim50Q810I2 Gm27389-201ENSMUST00000183622 195 ntBASIC16.05■□□□□ 0.16
Trim50Q810I2 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trim50Q810I2 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trim50Q810I2 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms