Protein–RNA interactions for Protein: Q5VTL8

PRPF38B, Pre-mRNA-splicing factor 38B, humanhuman

Known RBP Predictions only

Length 546 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38BQ5VTL8 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
PRPF38BQ5VTL8 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PRPF38BQ5VTL8 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC20.97■□□□□ 0.95
PRPF38BQ5VTL8 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PRPF38BQ5VTL8 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC20.97■□□□□ 0.95
PRPF38BQ5VTL8 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PRPF38BQ5VTL8 IGHV3-47-201ENST00000425060 335 ntBASIC20.97■□□□□ 0.95
PRPF38BQ5VTL8 HLA-F-220ENST00000434407 884 ntBASIC20.97■□□□□ 0.95
PRPF38BQ5VTL8 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC20.97■□□□□ 0.95
PRPF38BQ5VTL8 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC20.97■□□□□ 0.95
PRPF38BQ5VTL8 AC040169.1-201ENST00000565382 521 ntBASIC20.97■□□□□ 0.95
PRPF38BQ5VTL8 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC20.97■□□□□ 0.95
PRPF38BQ5VTL8 IGHV3OR16-7-201ENST00000604106 360 ntBASIC20.97■□□□□ 0.95
PRPF38BQ5VTL8 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PRPF38BQ5VTL8 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC20.97■□□□□ 0.95
PRPF38BQ5VTL8 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PRPF38BQ5VTL8 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
PRPF38BQ5VTL8 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
PRPF38BQ5VTL8 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PRPF38BQ5VTL8 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC20.96■□□□□ 0.95
PRPF38BQ5VTL8 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC20.96■□□□□ 0.95
PRPF38BQ5VTL8 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC20.96■□□□□ 0.95
PRPF38BQ5VTL8 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC20.96■□□□□ 0.95
PRPF38BQ5VTL8 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PRPF38BQ5VTL8 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC20.96■□□□□ 0.95
PRPF38BQ5VTL8 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
PRPF38BQ5VTL8 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PRPF38BQ5VTL8 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PRPF38BQ5VTL8 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
PRPF38BQ5VTL8 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
PRPF38BQ5VTL8 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC20.96■□□□□ 0.95
PRPF38BQ5VTL8 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC20.96■□□□□ 0.95
PRPF38BQ5VTL8 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC20.96■□□□□ 0.95
PRPF38BQ5VTL8 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC20.96■□□□□ 0.95
PRPF38BQ5VTL8 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
PRPF38BQ5VTL8 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
PRPF38BQ5VTL8 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC20.96■□□□□ 0.95
PRPF38BQ5VTL8 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC20.96■□□□□ 0.95
PRPF38BQ5VTL8 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC20.96■□□□□ 0.95
PRPF38BQ5VTL8 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
PRPF38BQ5VTL8 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.95
PRPF38BQ5VTL8 AC104109.2-201ENST00000602919 1418 ntBASIC20.95■□□□□ 0.95
PRPF38BQ5VTL8 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
PRPF38BQ5VTL8 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PRPF38BQ5VTL8 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC20.95■□□□□ 0.94
PRPF38BQ5VTL8 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC20.95■□□□□ 0.94
PRPF38BQ5VTL8 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
PRPF38BQ5VTL8 BAALC-202ENST00000306391 243 ntTSL 5 BASIC20.95■□□□□ 0.94
PRPF38BQ5VTL8 BAALC-204ENST00000330955 222 ntTSL 5 BASIC20.95■□□□□ 0.94
PRPF38BQ5VTL8 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
PRPF38BQ5VTL8 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PRPF38BQ5VTL8 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC20.95■□□□□ 0.94
PRPF38BQ5VTL8 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
PRPF38BQ5VTL8 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PRPF38BQ5VTL8 AC211486.1-202ENST00000416371 468 ntBASIC20.95■□□□□ 0.94
PRPF38BQ5VTL8 AL645939.2-201ENST00000427340 991 ntBASIC20.95■□□□□ 0.94
PRPF38BQ5VTL8 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PRPF38BQ5VTL8 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC20.95■□□□□ 0.94
PRPF38BQ5VTL8 BET1L-206ENST00000486280 665 ntTSL 3 BASIC20.95■□□□□ 0.94
PRPF38BQ5VTL8 AC211476.1-201ENST00000503899 468 ntBASIC20.95■□□□□ 0.94
PRPF38BQ5VTL8 SPCS2P1-201ENST00000561636 679 ntBASIC20.95■□□□□ 0.94
PRPF38BQ5VTL8 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC20.95■□□□□ 0.94
PRPF38BQ5VTL8 RNF126P1-202ENST00000569893 925 ntBASIC20.95■□□□□ 0.94
PRPF38BQ5VTL8 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC20.95■□□□□ 0.94
PRPF38BQ5VTL8 AL136038.4-201ENST00000603606 1261 ntBASIC20.95■□□□□ 0.94
PRPF38BQ5VTL8 AL355877.3-201ENST00000622820 899 ntBASIC20.95■□□□□ 0.94
PRPF38BQ5VTL8 AC116407.3-201ENST00000623905 1129 ntBASIC20.95■□□□□ 0.94
PRPF38BQ5VTL8 CCNC-219ENST00000627680 896 ntTSL 5 BASIC20.95■□□□□ 0.94
PRPF38BQ5VTL8 FAM215A-202ENST00000632077 792 ntBASIC20.95■□□□□ 0.94
PRPF38BQ5VTL8 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC20.95■□□□□ 0.94
PRPF38BQ5VTL8 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
PRPF38BQ5VTL8 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
PRPF38BQ5VTL8 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PRPF38BQ5VTL8 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
PRPF38BQ5VTL8 ILF2-202ENST00000368681 726 ntTSL 2 BASIC20.94■□□□□ 0.94
PRPF38BQ5VTL8 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
PRPF38BQ5VTL8 NUS1P2-201ENST00000417358 873 ntBASIC20.94■□□□□ 0.94
PRPF38BQ5VTL8 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC20.94■□□□□ 0.94
PRPF38BQ5VTL8 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PRPF38BQ5VTL8 SEC1P-202ENST00000473944 940 ntBASIC20.94■□□□□ 0.94
PRPF38BQ5VTL8 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC20.94■□□□□ 0.94
PRPF38BQ5VTL8 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC20.94■□□□□ 0.94
PRPF38BQ5VTL8 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC20.94■□□□□ 0.94
PRPF38BQ5VTL8 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC20.94■□□□□ 0.94
PRPF38BQ5VTL8 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC20.94■□□□□ 0.94
PRPF38BQ5VTL8 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PRPF38BQ5VTL8 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC20.94■□□□□ 0.94
PRPF38BQ5VTL8 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
PRPF38BQ5VTL8 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
PRPF38BQ5VTL8 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PRPF38BQ5VTL8 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC20.94■□□□□ 0.94
PRPF38BQ5VTL8 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PRPF38BQ5VTL8 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
PRPF38BQ5VTL8 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
PRPF38BQ5VTL8 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PRPF38BQ5VTL8 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC20.93■□□□□ 0.94
PRPF38BQ5VTL8 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC20.93■□□□□ 0.94
PRPF38BQ5VTL8 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC20.93■□□□□ 0.94
PRPF38BQ5VTL8 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC20.93■□□□□ 0.94
PRPF38BQ5VTL8 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC20.93■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms