Protein–RNA interactions for Protein: O75382

TRIM3, Tripartite motif-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3O75382 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC17.99■□□□□ 0.47
TRIM3O75382 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRIM3O75382 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRIM3O75382 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
TRIM3O75382 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC17.99■□□□□ 0.47
TRIM3O75382 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
TRIM3O75382 AC012618.2-201ENST00000428058 849 ntBASIC17.99■□□□□ 0.47
TRIM3O75382 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC17.99■□□□□ 0.47
TRIM3O75382 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
TRIM3O75382 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC17.99■□□□□ 0.47
TRIM3O75382 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC17.99■□□□□ 0.47
TRIM3O75382 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
TRIM3O75382 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRIM3O75382 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRIM3O75382 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC17.99■□□□□ 0.47
TRIM3O75382 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC17.99■□□□□ 0.47
TRIM3O75382 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRIM3O75382 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC17.99■□□□□ 0.47
TRIM3O75382 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRIM3O75382 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRIM3O75382 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TRIM3O75382 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
TRIM3O75382 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TRIM3O75382 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
TRIM3O75382 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC17.98■□□□□ 0.47
TRIM3O75382 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TRIM3O75382 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
TRIM3O75382 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
TRIM3O75382 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
TRIM3O75382 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC17.98■□□□□ 0.47
TRIM3O75382 RPS2P55-201ENST00000397318 883 ntBASIC17.98■□□□□ 0.47
TRIM3O75382 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
TRIM3O75382 AC107956.1-201ENST00000494359 873 ntBASIC17.98■□□□□ 0.47
TRIM3O75382 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC17.98■□□□□ 0.47
TRIM3O75382 AC233702.5-201ENST00000584107 538 ntBASIC17.98■□□□□ 0.47
TRIM3O75382 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
TRIM3O75382 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TRIM3O75382 AC004264.1-201ENST00000608354 794 ntBASIC17.98■□□□□ 0.47
TRIM3O75382 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TRIM3O75382 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
TRIM3O75382 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
TRIM3O75382 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC17.98■□□□□ 0.47
TRIM3O75382 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC17.98■□□□□ 0.47
TRIM3O75382 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
TRIM3O75382 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC17.98■□□□□ 0.47
TRIM3O75382 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
TRIM3O75382 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
TRIM3O75382 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TRIM3O75382 AP006587.1-201ENST00000534129 1502 ntBASIC17.98■□□□□ 0.47
TRIM3O75382 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
TRIM3O75382 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
TRIM3O75382 AL135905.2-201ENST00000584934 1404 ntBASIC17.98■□□□□ 0.47
TRIM3O75382 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TRIM3O75382 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC17.97■□□□□ 0.47
TRIM3O75382 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
TRIM3O75382 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
TRIM3O75382 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TRIM3O75382 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
TRIM3O75382 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
TRIM3O75382 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC17.97■□□□□ 0.47
TRIM3O75382 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
TRIM3O75382 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
TRIM3O75382 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
TRIM3O75382 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
TRIM3O75382 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TRIM3O75382 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
TRIM3O75382 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC17.97■□□□□ 0.47
TRIM3O75382 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TRIM3O75382 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC17.97■□□□□ 0.47
TRIM3O75382 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC17.97■□□□□ 0.47
TRIM3O75382 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
TRIM3O75382 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
TRIM3O75382 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC17.97■□□□□ 0.47
TRIM3O75382 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
TRIM3O75382 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
TRIM3O75382 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
TRIM3O75382 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
TRIM3O75382 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TRIM3O75382 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TRIM3O75382 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC17.97■□□□□ 0.47
TRIM3O75382 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TRIM3O75382 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TRIM3O75382 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
TRIM3O75382 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC17.97■□□□□ 0.47
TRIM3O75382 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRIM3O75382 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC17.96■□□□□ 0.47
TRIM3O75382 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRIM3O75382 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRIM3O75382 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRIM3O75382 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC17.96■□□□□ 0.47
TRIM3O75382 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRIM3O75382 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRIM3O75382 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRIM3O75382 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
TRIM3O75382 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC17.96■□□□□ 0.47
TRIM3O75382 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRIM3O75382 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRIM3O75382 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRIM3O75382 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
TRIM3O75382 AL596275.1-201ENST00000423464 877 ntBASIC17.96■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 50 ms