Protein–RNA interactions for Protein: O35218

Cpsf2, Cleavage and polyadenylation specificity factor subunit 2, mousemouse

Known RBP Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf2O35218 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cpsf2O35218 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cpsf2O35218 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cpsf2O35218 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
Cpsf2O35218 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Cpsf2O35218 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC17.66■□□□□ 0.42
Cpsf2O35218 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC17.66■□□□□ 0.42
Cpsf2O35218 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC17.66■□□□□ 0.42
Cpsf2O35218 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cpsf2O35218 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cpsf2O35218 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cpsf2O35218 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Cpsf2O35218 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
Cpsf2O35218 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cpsf2O35218 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC17.66■□□□□ 0.42
Cpsf2O35218 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cpsf2O35218 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Cpsf2O35218 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cpsf2O35218 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cpsf2O35218 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Cpsf2O35218 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Cpsf2O35218 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cpsf2O35218 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC17.65■□□□□ 0.42
Cpsf2O35218 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC17.65■□□□□ 0.42
Cpsf2O35218 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cpsf2O35218 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cpsf2O35218 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC17.65■□□□□ 0.42
Cpsf2O35218 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Cpsf2O35218 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC17.65■□□□□ 0.42
Cpsf2O35218 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cpsf2O35218 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cpsf2O35218 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cpsf2O35218 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Cpsf2O35218 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cpsf2O35218 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC17.65■□□□□ 0.42
Cpsf2O35218 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cpsf2O35218 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cpsf2O35218 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cpsf2O35218 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC17.65■□□□□ 0.42
Cpsf2O35218 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Cpsf2O35218 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cpsf2O35218 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Cpsf2O35218 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Cpsf2O35218 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.42
Cpsf2O35218 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC17.64■□□□□ 0.42
Cpsf2O35218 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Cpsf2O35218 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Cpsf2O35218 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cpsf2O35218 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC17.64■□□□□ 0.41
Cpsf2O35218 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cpsf2O35218 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cpsf2O35218 Gm715-201ENSMUST00000117865 831 ntBASIC17.64■□□□□ 0.41
Cpsf2O35218 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC17.64■□□□□ 0.41
Cpsf2O35218 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cpsf2O35218 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cpsf2O35218 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cpsf2O35218 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cpsf2O35218 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cpsf2O35218 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cpsf2O35218 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Cpsf2O35218 CT010478.1-201ENSMUST00000220747 2787 ntBASIC17.64■□□□□ 0.41
Cpsf2O35218 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cpsf2O35218 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cpsf2O35218 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cpsf2O35218 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cpsf2O35218 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cpsf2O35218 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Cpsf2O35218 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cpsf2O35218 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Cpsf2O35218 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Cpsf2O35218 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cpsf2O35218 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cpsf2O35218 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Cpsf2O35218 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC17.63■□□□□ 0.41
Cpsf2O35218 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cpsf2O35218 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cpsf2O35218 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Cpsf2O35218 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC17.63■□□□□ 0.41
Cpsf2O35218 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cpsf2O35218 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC17.63■□□□□ 0.41
Cpsf2O35218 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC17.63■□□□□ 0.41
Cpsf2O35218 Gm8520-201ENSMUST00000186517 868 ntBASIC17.63■□□□□ 0.41
Cpsf2O35218 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Cpsf2O35218 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Cpsf2O35218 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cpsf2O35218 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Cpsf2O35218 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cpsf2O35218 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cpsf2O35218 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cpsf2O35218 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cpsf2O35218 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cpsf2O35218 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Cpsf2O35218 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cpsf2O35218 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cpsf2O35218 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cpsf2O35218 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cpsf2O35218 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cpsf2O35218 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Cpsf2O35218 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cpsf2O35218 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms