Protein–RNA interactions for Protein: O15417

TNRC18, Trinucleotide repeat-containing gene 18 protein, humanhuman

Predicted RBP Predictions only

Length 2,968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC18O15417 AC093909.1-201ENST00000504731 1122 ntBASIC21.12■□□□□ 0.97
TNRC18O15417 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC21.12■□□□□ 0.97
TNRC18O15417 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC21.12■□□□□ 0.97
TNRC18O15417 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
TNRC18O15417 AC011484.1-201ENST00000377652 1995 ntBASIC21.12■□□□□ 0.97
TNRC18O15417 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
TNRC18O15417 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC21.12■□□□□ 0.97
TNRC18O15417 COA5-202ENST00000409997 557 ntTSL 4 BASIC21.12■□□□□ 0.97
TNRC18O15417 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC21.12■□□□□ 0.97
TNRC18O15417 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC21.12■□□□□ 0.97
TNRC18O15417 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
TNRC18O15417 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC21.12■□□□□ 0.97
TNRC18O15417 AC079602.3-201ENST00000623931 403 ntBASIC21.12■□□□□ 0.97
TNRC18O15417 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
TNRC18O15417 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
TNRC18O15417 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
TNRC18O15417 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC21.11■□□□□ 0.97
TNRC18O15417 AC242852.2-201ENST00000615738 1807 ntBASIC21.11■□□□□ 0.97
TNRC18O15417 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC21.11■□□□□ 0.97
TNRC18O15417 MIR770-201ENST00000390219 98 ntBASIC21.11■□□□□ 0.97
TNRC18O15417 SYS1-203ENST00000414310 795 ntTSL 3 BASIC21.11■□□□□ 0.97
TNRC18O15417 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC21.11■□□□□ 0.97
TNRC18O15417 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
TNRC18O15417 AL035252.4-201ENST00000624174 288 ntBASIC21.11■□□□□ 0.97
TNRC18O15417 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC21.11■□□□□ 0.97
TNRC18O15417 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC21.11■□□□□ 0.97
TNRC18O15417 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
TNRC18O15417 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC21.11■□□□□ 0.97
TNRC18O15417 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC21.11■□□□□ 0.97
TNRC18O15417 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
TNRC18O15417 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
TNRC18O15417 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
TNRC18O15417 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC21.11■□□□□ 0.97
TNRC18O15417 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
TNRC18O15417 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
TNRC18O15417 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC21.11■□□□□ 0.97
TNRC18O15417 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TNRC18O15417 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC21.1■□□□□ 0.97
TNRC18O15417 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC21.1■□□□□ 0.97
TNRC18O15417 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC21.1■□□□□ 0.97
TNRC18O15417 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC21.1■□□□□ 0.97
TNRC18O15417 MIR4674-201ENST00000582457 87 ntBASIC21.1■□□□□ 0.97
TNRC18O15417 MIR2861-201ENST00000636310 90 ntBASIC21.1■□□□□ 0.97
TNRC18O15417 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TNRC18O15417 Z83836.1-201ENST00000624605 1642 ntBASIC21.1■□□□□ 0.97
TNRC18O15417 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
TNRC18O15417 COPE-202ENST00000349893 948 ntTSL 2 BASIC21.1■□□□□ 0.97
TNRC18O15417 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC21.1■□□□□ 0.97
TNRC18O15417 RBM7-207ENST00000544582 692 ntTSL 3 BASIC21.1■□□□□ 0.97
TNRC18O15417 NSUN5P1-202ENST00000421140 1535 ntBASIC21.1■□□□□ 0.97
TNRC18O15417 NSUN5P2-203ENST00000457352 1529 ntBASIC21.1■□□□□ 0.97
TNRC18O15417 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TNRC18O15417 PTMS-202ENST00000389462 773 ntTSL 2 BASIC21.09■□□□□ 0.97
TNRC18O15417 GREM1-201ENST00000560677 623 ntTSL 4 BASIC21.09■□□□□ 0.97
TNRC18O15417 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC21.09■□□□□ 0.97
TNRC18O15417 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC21.09■□□□□ 0.97
TNRC18O15417 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
TNRC18O15417 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC21.09■□□□□ 0.97
TNRC18O15417 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC21.09■□□□□ 0.97
TNRC18O15417 AL117328.2-201ENST00000624617 1940 ntBASIC21.09■□□□□ 0.97
TNRC18O15417 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
TNRC18O15417 AC080038.3-201ENST00000623346 1952 ntBASIC21.09■□□□□ 0.97
TNRC18O15417 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC21.09■□□□□ 0.97
TNRC18O15417 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
TNRC18O15417 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
TNRC18O15417 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC21.09■□□□□ 0.97
TNRC18O15417 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC21.09■□□□□ 0.97
TNRC18O15417 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC21.09■□□□□ 0.97
TNRC18O15417 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
TNRC18O15417 AC012645.4-201ENST00000610691 1061 ntBASIC21.09■□□□□ 0.97
TNRC18O15417 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
TNRC18O15417 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
TNRC18O15417 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
TNRC18O15417 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC21.09■□□□□ 0.97
TNRC18O15417 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
TNRC18O15417 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC21.09■□□□□ 0.97
TNRC18O15417 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC21.09■□□□□ 0.97
TNRC18O15417 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC21.09■□□□□ 0.97
TNRC18O15417 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC21.09■□□□□ 0.97
TNRC18O15417 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC21.09■□□□□ 0.97
TNRC18O15417 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC21.08■□□□□ 0.97
TNRC18O15417 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
TNRC18O15417 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
TNRC18O15417 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
TNRC18O15417 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC21.08■□□□□ 0.97
TNRC18O15417 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC21.08■□□□□ 0.96
TNRC18O15417 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC21.08■□□□□ 0.96
TNRC18O15417 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC21.08■□□□□ 0.96
TNRC18O15417 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
TNRC18O15417 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC21.08■□□□□ 0.96
TNRC18O15417 AC011467.4-201ENST00000594891 528 ntBASIC21.08■□□□□ 0.96
TNRC18O15417 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
TNRC18O15417 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC21.08■□□□□ 0.96
TNRC18O15417 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
TNRC18O15417 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
TNRC18O15417 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
TNRC18O15417 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC21.07■□□□□ 0.96
TNRC18O15417 AL136038.4-201ENST00000603606 1261 ntBASIC21.07■□□□□ 0.96
TNRC18O15417 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
TNRC18O15417 AC106028.4-201ENST00000614509 607 ntBASIC21.07■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms