Protein–RNA interactions for Protein: A0A0G2JEU8

Trav13n-1, T cell receptor alpha variable 13N-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13n-1A0A0G2JEU8 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC11.99□□□□□ -0.49
Trav13n-1A0A0G2JEU8 Gm6345-202ENSMUST00000180900 204 ntBASIC11.99□□□□□ -0.49
Trav13n-1A0A0G2JEU8 Gm33142-201ENSMUST00000193913 867 ntBASIC11.99□□□□□ -0.49
Trav13n-1A0A0G2JEU8 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav13n-1A0A0G2JEU8 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav13n-1A0A0G2JEU8 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav13n-1A0A0G2JEU8 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav13n-1A0A0G2JEU8 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav13n-1A0A0G2JEU8 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav13n-1A0A0G2JEU8 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trav13n-1A0A0G2JEU8 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav13n-1A0A0G2JEU8 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC11.99□□□□□ -0.49
Trav13n-1A0A0G2JEU8 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav13n-1A0A0G2JEU8 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav13n-1A0A0G2JEU8 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trav13n-1A0A0G2JEU8 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav13n-1A0A0G2JEU8 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav13n-1A0A0G2JEU8 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Trav13n-1A0A0G2JEU8 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC11.99□□□□□ -0.49
Trav13n-1A0A0G2JEU8 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav13n-1A0A0G2JEU8 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav13n-1A0A0G2JEU8 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Trav13n-1A0A0G2JEU8 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav13n-1A0A0G2JEU8 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Trav13n-1A0A0G2JEU8 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav13n-1A0A0G2JEU8 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC11.98□□□□□ -0.49
Trav13n-1A0A0G2JEU8 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trav13n-1A0A0G2JEU8 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav13n-1A0A0G2JEU8 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav13n-1A0A0G2JEU8 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
Trav13n-1A0A0G2JEU8 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav13n-1A0A0G2JEU8 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav13n-1A0A0G2JEU8 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav13n-1A0A0G2JEU8 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav13n-1A0A0G2JEU8 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trav13n-1A0A0G2JEU8 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav13n-1A0A0G2JEU8 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav13n-1A0A0G2JEU8 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav13n-1A0A0G2JEU8 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav13n-1A0A0G2JEU8 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC11.98□□□□□ -0.49
Trav13n-1A0A0G2JEU8 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC11.98□□□□□ -0.49
Trav13n-1A0A0G2JEU8 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trav13n-1A0A0G2JEU8 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Trav13n-1A0A0G2JEU8 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Trav13n-1A0A0G2JEU8 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav13n-1A0A0G2JEU8 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav13n-1A0A0G2JEU8 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trav13n-1A0A0G2JEU8 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav13n-1A0A0G2JEU8 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav13n-1A0A0G2JEU8 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC11.98□□□□□ -0.49
Trav13n-1A0A0G2JEU8 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav13n-1A0A0G2JEU8 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC11.98□□□□□ -0.49
Trav13n-1A0A0G2JEU8 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav13n-1A0A0G2JEU8 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav13n-1A0A0G2JEU8 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav13n-1A0A0G2JEU8 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Trav13n-1A0A0G2JEU8 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC11.97□□□□□ -0.49
Trav13n-1A0A0G2JEU8 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav13n-1A0A0G2JEU8 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav13n-1A0A0G2JEU8 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav13n-1A0A0G2JEU8 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Trav13n-1A0A0G2JEU8 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav13n-1A0A0G2JEU8 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Trav13n-1A0A0G2JEU8 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC11.97□□□□□ -0.49
Trav13n-1A0A0G2JEU8 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Trav13n-1A0A0G2JEU8 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Trav13n-1A0A0G2JEU8 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC11.97□□□□□ -0.49
Trav13n-1A0A0G2JEU8 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC11.97□□□□□ -0.49
Trav13n-1A0A0G2JEU8 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Trav13n-1A0A0G2JEU8 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav13n-1A0A0G2JEU8 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav13n-1A0A0G2JEU8 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav13n-1A0A0G2JEU8 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav13n-1A0A0G2JEU8 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav13n-1A0A0G2JEU8 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Trav13n-1A0A0G2JEU8 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC11.97□□□□□ -0.49
Trav13n-1A0A0G2JEU8 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC11.97□□□□□ -0.49
Trav13n-1A0A0G2JEU8 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav13n-1A0A0G2JEU8 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav13n-1A0A0G2JEU8 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav13n-1A0A0G2JEU8 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Trav13n-1A0A0G2JEU8 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav13n-1A0A0G2JEU8 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav13n-1A0A0G2JEU8 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC11.96□□□□□ -0.49
Trav13n-1A0A0G2JEU8 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
Trav13n-1A0A0G2JEU8 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav13n-1A0A0G2JEU8 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav13n-1A0A0G2JEU8 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Trav13n-1A0A0G2JEU8 Cxcl14-202ENSMUST00000224801 1467 ntBASIC11.96□□□□□ -0.49
Trav13n-1A0A0G2JEU8 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav13n-1A0A0G2JEU8 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC11.96□□□□□ -0.49
Trav13n-1A0A0G2JEU8 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav13n-1A0A0G2JEU8 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav13n-1A0A0G2JEU8 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav13n-1A0A0G2JEU8 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
Trav13n-1A0A0G2JEU8 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav13n-1A0A0G2JEU8 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
Trav13n-1A0A0G2JEU8 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC11.96□□□□□ -0.49
Trav13n-1A0A0G2JEU8 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav13n-1A0A0G2JEU8 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC11.96□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms