Protein–RNA interactions for Protein: A0A0B4J1F6

BC053393, cDNA sequence BC053393, mousemouse

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BC053393A0A0B4J1F6 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
BC053393A0A0B4J1F6 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
BC053393A0A0B4J1F6 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC13.24□□□□□ -0.29
BC053393A0A0B4J1F6 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
BC053393A0A0B4J1F6 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
BC053393A0A0B4J1F6 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
BC053393A0A0B4J1F6 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
BC053393A0A0B4J1F6 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
BC053393A0A0B4J1F6 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
BC053393A0A0B4J1F6 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
BC053393A0A0B4J1F6 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
BC053393A0A0B4J1F6 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
BC053393A0A0B4J1F6 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC13.24□□□□□ -0.29
BC053393A0A0B4J1F6 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC13.24□□□□□ -0.29
BC053393A0A0B4J1F6 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
BC053393A0A0B4J1F6 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC13.24□□□□□ -0.29
BC053393A0A0B4J1F6 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
BC053393A0A0B4J1F6 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC13.24□□□□□ -0.29
BC053393A0A0B4J1F6 Gm37292-201ENSMUST00000192062 758 ntBASIC13.24□□□□□ -0.29
BC053393A0A0B4J1F6 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC13.24□□□□□ -0.29
BC053393A0A0B4J1F6 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
BC053393A0A0B4J1F6 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
BC053393A0A0B4J1F6 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
BC053393A0A0B4J1F6 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC13.24□□□□□ -0.29
BC053393A0A0B4J1F6 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
BC053393A0A0B4J1F6 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
BC053393A0A0B4J1F6 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
BC053393A0A0B4J1F6 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
BC053393A0A0B4J1F6 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
BC053393A0A0B4J1F6 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
BC053393A0A0B4J1F6 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
BC053393A0A0B4J1F6 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
BC053393A0A0B4J1F6 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC13.24□□□□□ -0.29
BC053393A0A0B4J1F6 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
BC053393A0A0B4J1F6 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
BC053393A0A0B4J1F6 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
BC053393A0A0B4J1F6 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
BC053393A0A0B4J1F6 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
BC053393A0A0B4J1F6 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
BC053393A0A0B4J1F6 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
BC053393A0A0B4J1F6 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
BC053393A0A0B4J1F6 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
BC053393A0A0B4J1F6 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
BC053393A0A0B4J1F6 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
BC053393A0A0B4J1F6 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC13.23□□□□□ -0.29
BC053393A0A0B4J1F6 Zkscan3-208ENSMUST00000224820 5398 ntBASIC13.23□□□□□ -0.29
BC053393A0A0B4J1F6 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
BC053393A0A0B4J1F6 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
BC053393A0A0B4J1F6 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
BC053393A0A0B4J1F6 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
BC053393A0A0B4J1F6 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
BC053393A0A0B4J1F6 Gm43183-201ENSMUST00000200632 547 ntBASIC13.23□□□□□ -0.29
BC053393A0A0B4J1F6 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
BC053393A0A0B4J1F6 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
BC053393A0A0B4J1F6 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
BC053393A0A0B4J1F6 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
BC053393A0A0B4J1F6 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
BC053393A0A0B4J1F6 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
BC053393A0A0B4J1F6 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC13.23□□□□□ -0.29
BC053393A0A0B4J1F6 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
BC053393A0A0B4J1F6 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC13.23□□□□□ -0.29
BC053393A0A0B4J1F6 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
BC053393A0A0B4J1F6 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
BC053393A0A0B4J1F6 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
BC053393A0A0B4J1F6 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
BC053393A0A0B4J1F6 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
BC053393A0A0B4J1F6 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
BC053393A0A0B4J1F6 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
BC053393A0A0B4J1F6 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
BC053393A0A0B4J1F6 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
BC053393A0A0B4J1F6 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC13.22□□□□□ -0.29
BC053393A0A0B4J1F6 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
BC053393A0A0B4J1F6 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
BC053393A0A0B4J1F6 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC13.22□□□□□ -0.29
BC053393A0A0B4J1F6 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC13.22□□□□□ -0.29
BC053393A0A0B4J1F6 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
BC053393A0A0B4J1F6 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
BC053393A0A0B4J1F6 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
BC053393A0A0B4J1F6 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
BC053393A0A0B4J1F6 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
BC053393A0A0B4J1F6 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC13.22□□□□□ -0.29
BC053393A0A0B4J1F6 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
BC053393A0A0B4J1F6 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
BC053393A0A0B4J1F6 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
BC053393A0A0B4J1F6 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
BC053393A0A0B4J1F6 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
BC053393A0A0B4J1F6 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
BC053393A0A0B4J1F6 AC093043.3-201ENSMUST00000226531 2273 ntBASIC13.22□□□□□ -0.29
BC053393A0A0B4J1F6 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC13.21□□□□□ -0.29
BC053393A0A0B4J1F6 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
BC053393A0A0B4J1F6 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC13.21□□□□□ -0.29
BC053393A0A0B4J1F6 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
BC053393A0A0B4J1F6 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC13.21□□□□□ -0.29
BC053393A0A0B4J1F6 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
BC053393A0A0B4J1F6 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
BC053393A0A0B4J1F6 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
BC053393A0A0B4J1F6 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
BC053393A0A0B4J1F6 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC13.21□□□□□ -0.29
BC053393A0A0B4J1F6 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
BC053393A0A0B4J1F6 Gm5643-201ENSMUST00000117081 966 ntBASIC13.21□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms