Protein–RNA interactions for Protein: A0A075B6B2

Trav6n-6, T cell receptor alpha variable 6N-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-6A0A075B6B2 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav6n-6A0A075B6B2 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav6n-6A0A075B6B2 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC12.34□□□□□ -0.43
Trav6n-6A0A075B6B2 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav6n-6A0A075B6B2 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav6n-6A0A075B6B2 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav6n-6A0A075B6B2 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trav6n-6A0A075B6B2 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav6n-6A0A075B6B2 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav6n-6A0A075B6B2 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav6n-6A0A075B6B2 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trav6n-6A0A075B6B2 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav6n-6A0A075B6B2 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC12.33□□□□□ -0.43
Trav6n-6A0A075B6B2 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.43
Trav6n-6A0A075B6B2 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.43
Trav6n-6A0A075B6B2 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav6n-6A0A075B6B2 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav6n-6A0A075B6B2 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav6n-6A0A075B6B2 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav6n-6A0A075B6B2 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trav6n-6A0A075B6B2 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav6n-6A0A075B6B2 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Trav6n-6A0A075B6B2 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav6n-6A0A075B6B2 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC12.33□□□□□ -0.44
Trav6n-6A0A075B6B2 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC12.33□□□□□ -0.44
Trav6n-6A0A075B6B2 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav6n-6A0A075B6B2 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trav6n-6A0A075B6B2 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav6n-6A0A075B6B2 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav6n-6A0A075B6B2 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Trav6n-6A0A075B6B2 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Trav6n-6A0A075B6B2 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav6n-6A0A075B6B2 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav6n-6A0A075B6B2 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC12.33□□□□□ -0.44
Trav6n-6A0A075B6B2 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC12.33□□□□□ -0.44
Trav6n-6A0A075B6B2 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC12.33□□□□□ -0.44
Trav6n-6A0A075B6B2 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav6n-6A0A075B6B2 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav6n-6A0A075B6B2 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav6n-6A0A075B6B2 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav6n-6A0A075B6B2 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav6n-6A0A075B6B2 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav6n-6A0A075B6B2 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Trav6n-6A0A075B6B2 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav6n-6A0A075B6B2 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC12.32□□□□□ -0.44
Trav6n-6A0A075B6B2 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav6n-6A0A075B6B2 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav6n-6A0A075B6B2 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav6n-6A0A075B6B2 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC12.32□□□□□ -0.44
Trav6n-6A0A075B6B2 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav6n-6A0A075B6B2 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav6n-6A0A075B6B2 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav6n-6A0A075B6B2 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Trav6n-6A0A075B6B2 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Trav6n-6A0A075B6B2 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Trav6n-6A0A075B6B2 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC12.32□□□□□ -0.44
Trav6n-6A0A075B6B2 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Trav6n-6A0A075B6B2 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trav6n-6A0A075B6B2 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC12.32□□□□□ -0.44
Trav6n-6A0A075B6B2 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC12.32□□□□□ -0.44
Trav6n-6A0A075B6B2 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC12.32□□□□□ -0.44
Trav6n-6A0A075B6B2 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trav6n-6A0A075B6B2 Mtag2-201ENSMUST00000058665 714 ntBASIC12.32□□□□□ -0.44
Trav6n-6A0A075B6B2 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav6n-6A0A075B6B2 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav6n-6A0A075B6B2 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav6n-6A0A075B6B2 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav6n-6A0A075B6B2 AC108858.1-201ENSMUST00000228461 1498 ntBASIC12.32□□□□□ -0.44
Trav6n-6A0A075B6B2 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trav6n-6A0A075B6B2 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trav6n-6A0A075B6B2 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav6n-6A0A075B6B2 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Trav6n-6A0A075B6B2 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav6n-6A0A075B6B2 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav6n-6A0A075B6B2 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav6n-6A0A075B6B2 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav6n-6A0A075B6B2 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav6n-6A0A075B6B2 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav6n-6A0A075B6B2 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav6n-6A0A075B6B2 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav6n-6A0A075B6B2 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav6n-6A0A075B6B2 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav6n-6A0A075B6B2 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav6n-6A0A075B6B2 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav6n-6A0A075B6B2 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav6n-6A0A075B6B2 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav6n-6A0A075B6B2 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Trav6n-6A0A075B6B2 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav6n-6A0A075B6B2 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trav6n-6A0A075B6B2 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav6n-6A0A075B6B2 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Trav6n-6A0A075B6B2 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trav6n-6A0A075B6B2 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC12.31□□□□□ -0.44
Trav6n-6A0A075B6B2 Gm27011-201ENSMUST00000182352 972 ntBASIC12.31□□□□□ -0.44
Trav6n-6A0A075B6B2 Gm29241-201ENSMUST00000189260 1096 ntBASIC12.31□□□□□ -0.44
Trav6n-6A0A075B6B2 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav6n-6A0A075B6B2 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC12.31□□□□□ -0.44
Trav6n-6A0A075B6B2 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trav6n-6A0A075B6B2 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav6n-6A0A075B6B2 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms