Protein–RNA interactions for Protein: A0A075B617

Trav16d-dv11, T cell receptor alpha variable 16D-DV11 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16d-dv11A0A075B617 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav16d-dv11A0A075B617 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav16d-dv11A0A075B617 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trav16d-dv11A0A075B617 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC12.18□□□□□ -0.46
Trav16d-dv11A0A075B617 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav16d-dv11A0A075B617 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trav16d-dv11A0A075B617 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC12.18□□□□□ -0.46
Trav16d-dv11A0A075B617 Gm29241-201ENSMUST00000189260 1096 ntBASIC12.18□□□□□ -0.46
Trav16d-dv11A0A075B617 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Trav16d-dv11A0A075B617 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav16d-dv11A0A075B617 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Trav16d-dv11A0A075B617 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Trav16d-dv11A0A075B617 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav16d-dv11A0A075B617 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav16d-dv11A0A075B617 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav16d-dv11A0A075B617 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav16d-dv11A0A075B617 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Trav16d-dv11A0A075B617 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav16d-dv11A0A075B617 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Trav16d-dv11A0A075B617 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC12.18□□□□□ -0.46
Trav16d-dv11A0A075B617 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav16d-dv11A0A075B617 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav16d-dv11A0A075B617 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav16d-dv11A0A075B617 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav16d-dv11A0A075B617 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav16d-dv11A0A075B617 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav16d-dv11A0A075B617 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav16d-dv11A0A075B617 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav16d-dv11A0A075B617 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trav16d-dv11A0A075B617 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav16d-dv11A0A075B617 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav16d-dv11A0A075B617 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trav16d-dv11A0A075B617 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav16d-dv11A0A075B617 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav16d-dv11A0A075B617 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav16d-dv11A0A075B617 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Trav16d-dv11A0A075B617 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trav16d-dv11A0A075B617 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav16d-dv11A0A075B617 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Trav16d-dv11A0A075B617 Gm11643-201ENSMUST00000119578 864 ntBASIC12.17□□□□□ -0.46
Trav16d-dv11A0A075B617 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trav16d-dv11A0A075B617 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav16d-dv11A0A075B617 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav16d-dv11A0A075B617 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trav16d-dv11A0A075B617 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
Trav16d-dv11A0A075B617 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC12.17□□□□□ -0.46
Trav16d-dv11A0A075B617 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Trav16d-dv11A0A075B617 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav16d-dv11A0A075B617 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC12.17□□□□□ -0.46
Trav16d-dv11A0A075B617 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Trav16d-dv11A0A075B617 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav16d-dv11A0A075B617 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav16d-dv11A0A075B617 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trav16d-dv11A0A075B617 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav16d-dv11A0A075B617 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav16d-dv11A0A075B617 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC12.17□□□□□ -0.46
Trav16d-dv11A0A075B617 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav16d-dv11A0A075B617 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Trav16d-dv11A0A075B617 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Trav16d-dv11A0A075B617 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav16d-dv11A0A075B617 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav16d-dv11A0A075B617 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trav16d-dv11A0A075B617 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trav16d-dv11A0A075B617 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trav16d-dv11A0A075B617 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav16d-dv11A0A075B617 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC12.16□□□□□ -0.46
Trav16d-dv11A0A075B617 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav16d-dv11A0A075B617 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Trav16d-dv11A0A075B617 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC12.16□□□□□ -0.46
Trav16d-dv11A0A075B617 Flg-201ENSMUST00000050758 1488 ntBASIC12.16□□□□□ -0.46
Trav16d-dv11A0A075B617 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trav16d-dv11A0A075B617 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav16d-dv11A0A075B617 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav16d-dv11A0A075B617 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav16d-dv11A0A075B617 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC12.16□□□□□ -0.46
Trav16d-dv11A0A075B617 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav16d-dv11A0A075B617 Ap3s1-204ENSMUST00000225520 957 ntBASIC12.16□□□□□ -0.46
Trav16d-dv11A0A075B617 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav16d-dv11A0A075B617 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav16d-dv11A0A075B617 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav16d-dv11A0A075B617 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC12.16□□□□□ -0.46
Trav16d-dv11A0A075B617 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav16d-dv11A0A075B617 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav16d-dv11A0A075B617 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav16d-dv11A0A075B617 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav16d-dv11A0A075B617 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav16d-dv11A0A075B617 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav16d-dv11A0A075B617 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav16d-dv11A0A075B617 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Trav16d-dv11A0A075B617 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav16d-dv11A0A075B617 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC12.16□□□□□ -0.46
Trav16d-dv11A0A075B617 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav16d-dv11A0A075B617 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC12.16□□□□□ -0.46
Trav16d-dv11A0A075B617 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav16d-dv11A0A075B617 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trav16d-dv11A0A075B617 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav16d-dv11A0A075B617 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav16d-dv11A0A075B617 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav16d-dv11A0A075B617 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav16d-dv11A0A075B617 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms