Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 AC011487.3-201ENST00000593607 453 ntBASIC5.06□□□□□ -1.6
PCDHB1Q9Y5F3 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC5.06□□□□□ -1.6
PCDHB1Q9Y5F3 AC008745.1-201ENST00000604064 271 ntBASIC5.06□□□□□ -1.6
PCDHB1Q9Y5F3 AL031320.1-201ENST00000604177 357 ntBASIC5.06□□□□□ -1.6
PCDHB1Q9Y5F3 AC068276.1-201ENST00000605793 379 ntBASIC5.06□□□□□ -1.6
PCDHB1Q9Y5F3 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC5.06□□□□□ -1.6
PCDHB1Q9Y5F3 AL391497.1-201ENST00000608671 547 ntBASIC5.06□□□□□ -1.6
PCDHB1Q9Y5F3 AC243773.3-201ENST00000613270 256 ntBASIC5.06□□□□□ -1.6
PCDHB1Q9Y5F3 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC5.06□□□□□ -1.6
PCDHB1Q9Y5F3 AL121890.2-201ENST00000617644 465 ntBASIC5.06□□□□□ -1.6
PCDHB1Q9Y5F3 BX005214.3-202ENST00000619809 325 ntBASIC5.06□□□□□ -1.6
PCDHB1Q9Y5F3 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC5.06□□□□□ -1.6
PCDHB1Q9Y5F3 AL590240.3-201ENST00000621416 943 ntBASIC5.06□□□□□ -1.6
PCDHB1Q9Y5F3 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
PCDHB1Q9Y5F3 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
PCDHB1Q9Y5F3 MAPK10-328ENST00000641553 4009 ntBASIC5.06□□□□□ -1.6
PCDHB1Q9Y5F3 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
PCDHB1Q9Y5F3 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC5.06□□□□□ -1.6
PCDHB1Q9Y5F3 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
PCDHB1Q9Y5F3 CYP1D1P-201ENST00000416662 1433 ntBASIC5.06□□□□□ -1.6
PCDHB1Q9Y5F3 AC092104.1-201ENST00000497346 1441 ntBASIC5.06□□□□□ -1.6
PCDHB1Q9Y5F3 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC5.06□□□□□ -1.6
PCDHB1Q9Y5F3 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
PCDHB1Q9Y5F3 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC5.05□□□□□ -1.6
PCDHB1Q9Y5F3 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
PCDHB1Q9Y5F3 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
PCDHB1Q9Y5F3 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
PCDHB1Q9Y5F3 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
PCDHB1Q9Y5F3 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
PCDHB1Q9Y5F3 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
PCDHB1Q9Y5F3 GNAS-202ENST00000306090 477 ntTSL 5 BASIC5.05□□□□□ -1.6
PCDHB1Q9Y5F3 OR4A15-201ENST00000314706 1035 ntBASIC5.05□□□□□ -1.6
PCDHB1Q9Y5F3 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
PCDHB1Q9Y5F3 RN7SKP95-201ENST00000362860 303 ntBASIC5.05□□□□□ -1.6
PCDHB1Q9Y5F3 RNU6-660P-201ENST00000364566 109 ntBASIC5.05□□□□□ -1.6
PCDHB1Q9Y5F3 DSTNP4-201ENST00000399472 474 ntBASIC5.05□□□□□ -1.6
PCDHB1Q9Y5F3 U3.32-201ENST00000408116 212 ntBASIC5.05□□□□□ -1.6
PCDHB1Q9Y5F3 AL663109.1-201ENST00000411498 844 ntBASIC5.05□□□□□ -1.6
PCDHB1Q9Y5F3 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC5.05□□□□□ -1.6
PCDHB1Q9Y5F3 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC5.05□□□□□ -1.6
PCDHB1Q9Y5F3 AC083875.1-201ENST00000419509 405 ntBASIC5.05□□□□□ -1.6
PCDHB1Q9Y5F3 DDX39BP1-205ENST00000422507 192 ntBASIC5.05□□□□□ -1.6
PCDHB1Q9Y5F3 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC5.05□□□□□ -1.6
PCDHB1Q9Y5F3 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC5.05□□□□□ -1.6
PCDHB1Q9Y5F3 CYCSP46-201ENST00000423569 204 ntBASIC5.05□□□□□ -1.6
PCDHB1Q9Y5F3 MTCO3P30-201ENST00000426425 670 ntBASIC5.05□□□□□ -1.6
PCDHB1Q9Y5F3 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC5.05□□□□□ -1.6
PCDHB1Q9Y5F3 AC091390.1-201ENST00000433904 331 ntBASIC5.05□□□□□ -1.6
PCDHB1Q9Y5F3 RHOT1P3-201ENST00000436571 331 ntBASIC5.05□□□□□ -1.6
PCDHB1Q9Y5F3 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC5.05□□□□□ -1.6
PCDHB1Q9Y5F3 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC5.05□□□□□ -1.6
PCDHB1Q9Y5F3 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC5.05□□□□□ -1.6
PCDHB1Q9Y5F3 EEF1A1P1-201ENST00000447052 739 ntBASIC5.05□□□□□ -1.6
PCDHB1Q9Y5F3 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC5.05□□□□□ -1.6
PCDHB1Q9Y5F3 ARPC3P2-201ENST00000457786 533 ntBASIC5.05□□□□□ -1.6
PCDHB1Q9Y5F3 RNA5SP269-201ENST00000459032 137 ntBASIC5.05□□□□□ -1.6
PCDHB1Q9Y5F3 AC097484.1-201ENST00000471148 389 ntBASIC5.05□□□□□ -1.6
PCDHB1Q9Y5F3 AP000893.1-201ENST00000474462 794 ntBASIC5.05□□□□□ -1.6
PCDHB1Q9Y5F3 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
PCDHB1Q9Y5F3 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
PCDHB1Q9Y5F3 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC5.05□□□□□ -1.6
PCDHB1Q9Y5F3 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC5.05□□□□□ -1.6
PCDHB1Q9Y5F3 AP002963.1-201ENST00000530590 184 ntBASIC5.05□□□□□ -1.6
PCDHB1Q9Y5F3 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC5.05□□□□□ -1.6
PCDHB1Q9Y5F3 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC5.05□□□□□ -1.6
PCDHB1Q9Y5F3 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC5.05□□□□□ -1.6
PCDHB1Q9Y5F3 AL389895.1-201ENST00000554127 252 ntBASIC5.05□□□□□ -1.6
PCDHB1Q9Y5F3 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC5.05□□□□□ -1.6
PCDHB1Q9Y5F3 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
PCDHB1Q9Y5F3 CYCSP2-201ENST00000558168 301 ntBASIC5.05□□□□□ -1.6
PCDHB1Q9Y5F3 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC5.05□□□□□ -1.6
PCDHB1Q9Y5F3 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC5.05□□□□□ -1.6
PCDHB1Q9Y5F3 MIR4691-201ENST00000583764 85 ntBASIC5.05□□□□□ -1.6
PCDHB1Q9Y5F3 SNORD39.3-201ENST00000584451 71 ntBASIC5.05□□□□□ -1.6
PCDHB1Q9Y5F3 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC5.05□□□□□ -1.6
PCDHB1Q9Y5F3 AC022146.1-201ENST00000595307 847 ntBASIC5.05□□□□□ -1.6
PCDHB1Q9Y5F3 AL121873.1-201ENST00000616013 524 ntBASIC5.05□□□□□ -1.6
PCDHB1Q9Y5F3 AC138965.3-201ENST00000623875 498 ntBASIC5.05□□□□□ -1.6
PCDHB1Q9Y5F3 AC025048.6-202ENST00000627667 438 ntBASIC5.05□□□□□ -1.6
PCDHB1Q9Y5F3 CR383658.2-201ENST00000547576 1525 ntBASIC5.05□□□□□ -1.6
PCDHB1Q9Y5F3 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
PCDHB1Q9Y5F3 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
PCDHB1Q9Y5F3 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
PCDHB1Q9Y5F3 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC5.04□□□□□ -1.6
PCDHB1Q9Y5F3 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC5.04□□□□□ -1.6
PCDHB1Q9Y5F3 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
PCDHB1Q9Y5F3 AL034370.1-201ENST00000397254 1590 ntBASIC5.04□□□□□ -1.6
PCDHB1Q9Y5F3 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC5.04□□□□□ -1.6
PCDHB1Q9Y5F3 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
PCDHB1Q9Y5F3 MTCO1P23-201ENST00000415223 1526 ntBASIC5.04□□□□□ -1.6
PCDHB1Q9Y5F3 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
PCDHB1Q9Y5F3 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC5.04□□□□□ -1.6
PCDHB1Q9Y5F3 RNU6-723P-201ENST00000383973 107 ntBASIC5.04□□□□□ -1.6
PCDHB1Q9Y5F3 AL078599.1-201ENST00000402075 293 ntBASIC5.04□□□□□ -1.6
PCDHB1Q9Y5F3 AL133384.1-201ENST00000412744 351 ntBASIC5.04□□□□□ -1.6
PCDHB1Q9Y5F3 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
PCDHB1Q9Y5F3 AL590139.1-201ENST00000416267 400 ntBASIC5.04□□□□□ -1.6
PCDHB1Q9Y5F3 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC5.04□□□□□ -1.6
PCDHB1Q9Y5F3 EBLN1-201ENST00000422359 1208 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
PCDHB1Q9Y5F3 RPS3AP44-201ENST00000425466 790 ntBASIC5.04□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 97.5 ms