Protein–RNA interactions for Protein: Q9Y4P1

ATG4B, Cysteine protease ATG4B, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4BQ9Y4P1 AL356967.1-201ENST00000406305 431 ntBASIC3.88□□□□□ -1.79
ATG4BQ9Y4P1 RNU6-77P-201ENST00000410554 91 ntBASIC3.88□□□□□ -1.79
ATG4BQ9Y4P1 RN7SKP33-201ENST00000410942 340 ntBASIC3.88□□□□□ -1.79
ATG4BQ9Y4P1 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC3.88□□□□□ -1.79
ATG4BQ9Y4P1 PRELID3BP11-201ENST00000414230 479 ntBASIC3.88□□□□□ -1.79
ATG4BQ9Y4P1 NUP35P2-201ENST00000416748 943 ntBASIC3.88□□□□□ -1.79
ATG4BQ9Y4P1 AC246680.2-201ENST00000422106 389 ntBASIC3.88□□□□□ -1.79
ATG4BQ9Y4P1 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC3.88□□□□□ -1.79
ATG4BQ9Y4P1 AL358472.1-201ENST00000431295 329 ntBASIC3.88□□□□□ -1.79
ATG4BQ9Y4P1 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC3.88□□□□□ -1.79
ATG4BQ9Y4P1 AC099063.1-201ENST00000437128 324 ntTSL 5 BASIC3.88□□□□□ -1.79
ATG4BQ9Y4P1 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC3.88□□□□□ -1.79
ATG4BQ9Y4P1 AP000893.1-201ENST00000474462 794 ntBASIC3.88□□□□□ -1.79
ATG4BQ9Y4P1 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC3.88□□□□□ -1.79
ATG4BQ9Y4P1 RPS4XP6-201ENST00000477670 797 ntBASIC3.88□□□□□ -1.79
ATG4BQ9Y4P1 RN7SL604P-201ENST00000492589 296 ntBASIC3.88□□□□□ -1.79
ATG4BQ9Y4P1 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC3.88□□□□□ -1.79
ATG4BQ9Y4P1 C1GALT1P2-201ENST00000510813 1104 ntBASIC3.88□□□□□ -1.79
ATG4BQ9Y4P1 MTCO1P35-201ENST00000515270 228 ntBASIC3.88□□□□□ -1.79
ATG4BQ9Y4P1 RNU7-143P-201ENST00000516781 65 ntBASIC3.88□□□□□ -1.79
ATG4BQ9Y4P1 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC3.88□□□□□ -1.79
ATG4BQ9Y4P1 AC104115.2-201ENST00000523026 687 ntBASIC3.88□□□□□ -1.79
ATG4BQ9Y4P1 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC3.88□□□□□ -1.79
ATG4BQ9Y4P1 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC3.88□□□□□ -1.79
ATG4BQ9Y4P1 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC3.88□□□□□ -1.79
ATG4BQ9Y4P1 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC3.88□□□□□ -1.79
ATG4BQ9Y4P1 AC007224.1-201ENST00000564410 144 ntBASIC3.88□□□□□ -1.79
ATG4BQ9Y4P1 AC079171.1-201ENST00000568788 914 ntBASIC3.88□□□□□ -1.79
ATG4BQ9Y4P1 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC3.88□□□□□ -1.79
ATG4BQ9Y4P1 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC3.88□□□□□ -1.79
ATG4BQ9Y4P1 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC3.88□□□□□ -1.79
ATG4BQ9Y4P1 AC010680.3-201ENST00000604215 520 ntBASIC3.88□□□□□ -1.79
ATG4BQ9Y4P1 AC114878.2-201ENST00000604863 1251 ntBASIC3.88□□□□□ -1.79
ATG4BQ9Y4P1 AL591034.3-201ENST00000605511 685 ntBASIC3.88□□□□□ -1.79
ATG4BQ9Y4P1 AC008759.3-201ENST00000613300 508 ntBASIC3.88□□□□□ -1.79
ATG4BQ9Y4P1 MIR4727-201ENST00000622232 55 ntBASIC3.88□□□□□ -1.79
ATG4BQ9Y4P1 AC103798.2-201ENST00000624292 632 ntBASIC3.88□□□□□ -1.79
ATG4BQ9Y4P1 AC090506.2-201ENST00000624521 419 ntBASIC3.88□□□□□ -1.79
ATG4BQ9Y4P1 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC3.88□□□□□ -1.79
ATG4BQ9Y4P1 FAM157B-203ENST00000639350 358 ntBASIC3.88□□□□□ -1.79
ATG4BQ9Y4P1 AC009452.1-201ENST00000640823 606 ntBASIC3.88□□□□□ -1.79
ATG4BQ9Y4P1 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC3.88□□□□□ -1.79
ATG4BQ9Y4P1 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
ATG4BQ9Y4P1 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC3.87□□□□□ -1.79
ATG4BQ9Y4P1 ZNF962P-201ENST00000443465 3140 ntBASIC3.87□□□□□ -1.79
ATG4BQ9Y4P1 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
ATG4BQ9Y4P1 Z82217.1-201ENST00000625157 8149 ntBASIC3.87□□□□□ -1.79
ATG4BQ9Y4P1 SYF2-202ENST00000354361 926 ntTSL 2 BASIC3.87□□□□□ -1.79
ATG4BQ9Y4P1 RHOT1P2-201ENST00000366423 333 ntBASIC3.87□□□□□ -1.79
ATG4BQ9Y4P1 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC3.87□□□□□ -1.79
ATG4BQ9Y4P1 RNU6-1151P-201ENST00000384684 107 ntBASIC3.87□□□□□ -1.79
ATG4BQ9Y4P1 AL035405.1-201ENST00000400795 710 ntBASIC3.87□□□□□ -1.79
ATG4BQ9Y4P1 AL022722.2-201ENST00000402519 180 ntBASIC3.87□□□□□ -1.79
ATG4BQ9Y4P1 AL355143.1-201ENST00000407101 841 ntBASIC3.87□□□□□ -1.79
ATG4BQ9Y4P1 METTL5-205ENST00000409837 936 ntAPPRIS ALT1 TSL 1 (best) BASIC3.87□□□□□ -1.79
ATG4BQ9Y4P1 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC3.87□□□□□ -1.79
ATG4BQ9Y4P1 AC241520.1-201ENST00000422654 1099 ntBASIC3.87□□□□□ -1.79
ATG4BQ9Y4P1 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC3.87□□□□□ -1.79
ATG4BQ9Y4P1 ELOCP6-201ENST00000429066 328 ntBASIC3.87□□□□□ -1.79
ATG4BQ9Y4P1 AL645931.1-201ENST00000439737 410 ntBASIC3.87□□□□□ -1.79
ATG4BQ9Y4P1 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC3.87□□□□□ -1.79
ATG4BQ9Y4P1 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC3.87□□□□□ -1.79
ATG4BQ9Y4P1 AL451050.1-201ENST00000450126 415 ntBASIC3.87□□□□□ -1.79
ATG4BQ9Y4P1 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC3.87□□□□□ -1.79
ATG4BQ9Y4P1 AC233982.1-201ENST00000451247 436 ntBASIC3.87□□□□□ -1.79
ATG4BQ9Y4P1 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC3.87□□□□□ -1.79
ATG4BQ9Y4P1 CCNB1IP1P3-201ENST00000454702 829 ntBASIC3.87□□□□□ -1.79
ATG4BQ9Y4P1 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC3.87□□□□□ -1.79
ATG4BQ9Y4P1 ELOCP12-201ENST00000458706 328 ntBASIC3.87□□□□□ -1.79
ATG4BQ9Y4P1 RPL7P1-201ENST00000468161 747 ntBASIC3.87□□□□□ -1.79
ATG4BQ9Y4P1 RPL7P9-201ENST00000468715 747 ntBASIC3.87□□□□□ -1.79
ATG4BQ9Y4P1 RPS17P11-201ENST00000474297 293 ntBASIC3.87□□□□□ -1.79
ATG4BQ9Y4P1 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC3.87□□□□□ -1.79
ATG4BQ9Y4P1 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC3.87□□□□□ -1.79
ATG4BQ9Y4P1 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
ATG4BQ9Y4P1 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC3.87□□□□□ -1.79
ATG4BQ9Y4P1 PRELID3BP7-201ENST00000503606 469 ntBASIC3.87□□□□□ -1.79
ATG4BQ9Y4P1 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC3.87□□□□□ -1.79
ATG4BQ9Y4P1 INPP4B-206ENST00000506217 673 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
ATG4BQ9Y4P1 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC3.87□□□□□ -1.79
ATG4BQ9Y4P1 PRELID3BP4-201ENST00000515476 571 ntBASIC3.87□□□□□ -1.79
ATG4BQ9Y4P1 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC3.87□□□□□ -1.79
ATG4BQ9Y4P1 IGLVIV-53-201ENST00000520107 367 ntBASIC3.87□□□□□ -1.79
ATG4BQ9Y4P1 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC3.87□□□□□ -1.79
ATG4BQ9Y4P1 MTND1P6-201ENST00000523621 946 ntBASIC3.87□□□□□ -1.79
ATG4BQ9Y4P1 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC3.87□□□□□ -1.79
ATG4BQ9Y4P1 PTP4A1P6-201ENST00000531034 478 ntBASIC3.87□□□□□ -1.79
ATG4BQ9Y4P1 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC3.87□□□□□ -1.79
ATG4BQ9Y4P1 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC3.87□□□□□ -1.79
ATG4BQ9Y4P1 AC012417.1-201ENST00000582307 1039 ntBASIC3.87□□□□□ -1.79
ATG4BQ9Y4P1 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC3.87□□□□□ -1.79
ATG4BQ9Y4P1 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC3.87□□□□□ -1.79
ATG4BQ9Y4P1 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC3.87□□□□□ -1.79
ATG4BQ9Y4P1 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC3.87□□□□□ -1.79
ATG4BQ9Y4P1 AC068620.3-201ENST00000602749 560 ntBASIC3.87□□□□□ -1.79
ATG4BQ9Y4P1 RNA5SP108-201ENST00000605921 117 ntBASIC3.87□□□□□ -1.79
ATG4BQ9Y4P1 AC012603.1-201ENST00000606424 528 ntBASIC3.87□□□□□ -1.79
ATG4BQ9Y4P1 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC3.87□□□□□ -1.79
ATG4BQ9Y4P1 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC3.87□□□□□ -1.79
ATG4BQ9Y4P1 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC3.87□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 110.6 ms