Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC7.18□□□□□ -1.26
ZC3H4Q9UPT8 FGFR2-205ENST00000357555 3690 ntTSL 2 BASIC7.18□□□□□ -1.26
ZC3H4Q9UPT8 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC7.18□□□□□ -1.26
ZC3H4Q9UPT8 ZPLD1-201ENST00000306176 3619 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
ZC3H4Q9UPT8 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
ZC3H4Q9UPT8 FSTL5-202ENST00000379164 4757 ntAPPRIS ALT1 TSL 1 (best) BASIC7.18□□□□□ -1.26
ZC3H4Q9UPT8 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC7.18□□□□□ -1.26
ZC3H4Q9UPT8 PTPRO-208ENST00000542557 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC7.18□□□□□ -1.26
ZC3H4Q9UPT8 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC7.18□□□□□ -1.26
ZC3H4Q9UPT8 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
ZC3H4Q9UPT8 AC105235.1-201ENST00000623208 1816 ntBASIC7.18□□□□□ -1.26
ZC3H4Q9UPT8 RNU6-574P-201ENST00000384265 107 ntBASIC7.18□□□□□ -1.26
ZC3H4Q9UPT8 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC7.18□□□□□ -1.26
ZC3H4Q9UPT8 SNORA11-201ENST00000408789 128 ntBASIC7.18□□□□□ -1.26
ZC3H4Q9UPT8 RNA5SP251-201ENST00000410614 137 ntBASIC7.18□□□□□ -1.26
ZC3H4Q9UPT8 RNU6-1148P-201ENST00000410992 104 ntBASIC7.18□□□□□ -1.26
ZC3H4Q9UPT8 AC084816.1-201ENST00000413794 565 ntTSL 4 BASIC7.18□□□□□ -1.26
ZC3H4Q9UPT8 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC7.18□□□□□ -1.26
ZC3H4Q9UPT8 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC7.18□□□□□ -1.26
ZC3H4Q9UPT8 AL645937.1-202ENST00000421799 937 ntBASIC7.18□□□□□ -1.26
ZC3H4Q9UPT8 EIF4A1P7-201ENST00000421800 1220 ntBASIC7.18□□□□□ -1.26
ZC3H4Q9UPT8 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC7.18□□□□□ -1.26
ZC3H4Q9UPT8 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC7.18□□□□□ -1.26
ZC3H4Q9UPT8 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC7.18□□□□□ -1.26
ZC3H4Q9UPT8 PRPF38AP1-201ENST00000451976 933 ntBASIC7.18□□□□□ -1.26
ZC3H4Q9UPT8 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC7.18□□□□□ -1.26
ZC3H4Q9UPT8 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC7.18□□□□□ -1.26
ZC3H4Q9UPT8 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC7.18□□□□□ -1.26
ZC3H4Q9UPT8 AC072052.1-201ENST00000496556 306 ntBASIC7.18□□□□□ -1.26
ZC3H4Q9UPT8 TMEM251P1-201ENST00000503717 318 ntBASIC7.18□□□□□ -1.26
ZC3H4Q9UPT8 AC021146.2-201ENST00000504736 556 ntBASIC7.18□□□□□ -1.26
ZC3H4Q9UPT8 AC010587.1-201ENST00000505809 469 ntBASIC7.18□□□□□ -1.26
ZC3H4Q9UPT8 RNU6-1314P-201ENST00000517139 104 ntBASIC7.18□□□□□ -1.26
ZC3H4Q9UPT8 AC008562.1-201ENST00000521763 330 ntBASIC7.18□□□□□ -1.26
ZC3H4Q9UPT8 MRPS16P1-201ENST00000523462 412 ntBASIC7.18□□□□□ -1.26
ZC3H4Q9UPT8 ARL6IP1P1-201ENST00000545836 610 ntBASIC7.18□□□□□ -1.26
ZC3H4Q9UPT8 AC103876.1-202ENST00000561498 369 ntTSL 3 BASIC7.18□□□□□ -1.26
ZC3H4Q9UPT8 AP000919.2-202ENST00000584431 673 ntTSL 3 BASIC7.18□□□□□ -1.26
ZC3H4Q9UPT8 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC7.18□□□□□ -1.26
ZC3H4Q9UPT8 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC7.18□□□□□ -1.26
ZC3H4Q9UPT8 RPL26P30-202ENST00000602923 645 ntBASIC7.18□□□□□ -1.26
ZC3H4Q9UPT8 AC090425.1-201ENST00000610007 140 ntBASIC7.18□□□□□ -1.26
ZC3H4Q9UPT8 BX664608.1-201ENST00000610519 487 ntBASIC7.18□□□□□ -1.26
ZC3H4Q9UPT8 AL158196.1-201ENST00000616786 434 ntBASIC7.18□□□□□ -1.26
ZC3H4Q9UPT8 AL122125.1-201ENST00000616999 600 ntBASIC7.18□□□□□ -1.26
ZC3H4Q9UPT8 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC7.18□□□□□ -1.26
ZC3H4Q9UPT8 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC7.18□□□□□ -1.26
ZC3H4Q9UPT8 TXK-201ENST00000264316 2914 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
ZC3H4Q9UPT8 C9-201ENST00000263408 2713 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
ZC3H4Q9UPT8 ANGPT2-201ENST00000325203 5416 ntAPPRIS P3 TSL 1 (best) BASIC7.18□□□□□ -1.26
ZC3H4Q9UPT8 AC009804.2-201ENST00000637566 3032 ntTSL 5 BASIC7.17□□□□□ -1.26
ZC3H4Q9UPT8 BNC2-203ENST00000380672 12844 ntAPPRIS P2 TSL 2 BASIC7.17□□□□□ -1.26
ZC3H4Q9UPT8 NCOR1-204ENST00000395851 7950 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
ZC3H4Q9UPT8 SULF1-201ENST00000260128 5710 ntAPPRIS P1 TSL 5 BASIC7.17□□□□□ -1.26
ZC3H4Q9UPT8 MSL2-202ENST00000434835 2272 ntTSL 2 BASIC7.17□□□□□ -1.26
ZC3H4Q9UPT8 PDE4D-216ENST00000507116 3350 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
ZC3H4Q9UPT8 ACOD1-202ENST00000449753 2097 ntAPPRIS ALT2 TSL 3 BASIC7.17□□□□□ -1.26
ZC3H4Q9UPT8 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC7.17□□□□□ -1.26
ZC3H4Q9UPT8 AP001284.1-201ENST00000528393 2118 ntBASIC7.17□□□□□ -1.26
ZC3H4Q9UPT8 GBP1-201ENST00000370473 3035 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
ZC3H4Q9UPT8 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
ZC3H4Q9UPT8 RPE65-201ENST00000262340 2610 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
ZC3H4Q9UPT8 AC024587.1-201ENST00000505925 2157 ntBASIC7.17□□□□□ -1.26
ZC3H4Q9UPT8 FYB2-201ENST00000343433 3135 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
ZC3H4Q9UPT8 ZNF402P-201ENST00000404435 3100 ntBASIC7.17□□□□□ -1.26
ZC3H4Q9UPT8 RPL7P26-201ENST00000333817 754 ntBASIC7.17□□□□□ -1.26
ZC3H4Q9UPT8 RNA5SP319-201ENST00000362768 119 ntBASIC7.17□□□□□ -1.26
ZC3H4Q9UPT8 Y_RNA.445-201ENST00000384168 102 ntBASIC7.17□□□□□ -1.26
ZC3H4Q9UPT8 RNU6-952P-201ENST00000391164 108 ntBASIC7.17□□□□□ -1.26
ZC3H4Q9UPT8 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC7.17□□□□□ -1.26
ZC3H4Q9UPT8 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
ZC3H4Q9UPT8 MTCO2P27-201ENST00000420740 428 ntBASIC7.17□□□□□ -1.26
ZC3H4Q9UPT8 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC7.17□□□□□ -1.26
ZC3H4Q9UPT8 AC108059.2-201ENST00000434626 151 ntBASIC7.17□□□□□ -1.26
ZC3H4Q9UPT8 CYCSP12-201ENST00000437729 300 ntBASIC7.17□□□□□ -1.26
ZC3H4Q9UPT8 H3F3BP1-201ENST00000440551 403 ntBASIC7.17□□□□□ -1.26
ZC3H4Q9UPT8 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC7.17□□□□□ -1.26
ZC3H4Q9UPT8 AC104651.2-201ENST00000447549 528 ntBASIC7.17□□□□□ -1.26
ZC3H4Q9UPT8 RPS15AP1-201ENST00000457423 391 ntBASIC7.17□□□□□ -1.26
ZC3H4Q9UPT8 RPL7P6-201ENST00000480903 738 ntBASIC7.17□□□□□ -1.26
ZC3H4Q9UPT8 AC027575.1-201ENST00000481064 460 ntBASIC7.17□□□□□ -1.26
ZC3H4Q9UPT8 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC7.17□□□□□ -1.26
ZC3H4Q9UPT8 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC7.17□□□□□ -1.26
ZC3H4Q9UPT8 RNU6-201P-201ENST00000517100 61 ntBASIC7.17□□□□□ -1.26
ZC3H4Q9UPT8 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC7.17□□□□□ -1.26
ZC3H4Q9UPT8 AC123904.2-201ENST00000548059 300 ntBASIC7.17□□□□□ -1.26
ZC3H4Q9UPT8 AC025031.1-201ENST00000552634 562 ntTSL 4 BASIC7.17□□□□□ -1.26
ZC3H4Q9UPT8 AC138907.7-201ENST00000568972 358 ntTSL 5 BASIC7.17□□□□□ -1.26
ZC3H4Q9UPT8 AC124303.1-201ENST00000605703 360 ntBASIC7.17□□□□□ -1.26
ZC3H4Q9UPT8 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC7.17□□□□□ -1.26
ZC3H4Q9UPT8 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
ZC3H4Q9UPT8 ATM-228ENST00000639240 498 ntTSL 5 BASIC7.17□□□□□ -1.26
ZC3H4Q9UPT8 ZNF699-203ENST00000591998 3358 ntAPPRIS P1 TSL 5 BASIC7.17□□□□□ -1.26
ZC3H4Q9UPT8 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
ZC3H4Q9UPT8 MGAM-202ENST00000475668 9172 ntAPPRIS P1 TSL 5 BASIC7.17□□□□□ -1.26
ZC3H4Q9UPT8 PTK2-201ENST00000340930 4414 ntTSL 2 BASIC7.17□□□□□ -1.26
ZC3H4Q9UPT8 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
ZC3H4Q9UPT8 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC7.17□□□□□ -1.26
ZC3H4Q9UPT8 CENPJ-206ENST00000616936 5020 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
ZC3H4Q9UPT8 LEPR-205ENST00000371060 5135 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 113.7 ms