Protein–RNA interactions for Protein: Q9UHC9

NPC1L1, Niemann-Pick C1-like protein 1, humanhuman

Predictions only

Length 1,359 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1Q9UHC9 MTCYBP29-201ENST00000436327 1006 ntBASIC4.81□□□□□ -1.64
NPC1L1Q9UHC9 AC114878.1-201ENST00000441166 358 ntBASIC4.81□□□□□ -1.64
NPC1L1Q9UHC9 U3.44-201ENST00000458938 192 ntBASIC4.81□□□□□ -1.64
NPC1L1Q9UHC9 APOOP2-201ENST00000461561 539 ntBASIC4.81□□□□□ -1.64
NPC1L1Q9UHC9 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC4.81□□□□□ -1.64
NPC1L1Q9UHC9 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC4.81□□□□□ -1.64
NPC1L1Q9UHC9 AC010387.1-201ENST00000507526 487 ntTSL 2 BASIC4.81□□□□□ -1.64
NPC1L1Q9UHC9 ACTR6P1-201ENST00000514311 1104 ntBASIC4.81□□□□□ -1.64
NPC1L1Q9UHC9 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC4.81□□□□□ -1.64
NPC1L1Q9UHC9 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC4.81□□□□□ -1.64
NPC1L1Q9UHC9 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC4.81□□□□□ -1.64
NPC1L1Q9UHC9 AC087888.1-201ENST00000550884 1254 ntBASIC4.81□□□□□ -1.64
NPC1L1Q9UHC9 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC4.81□□□□□ -1.64
NPC1L1Q9UHC9 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC4.81□□□□□ -1.64
NPC1L1Q9UHC9 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
NPC1L1Q9UHC9 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC4.81□□□□□ -1.64
NPC1L1Q9UHC9 AC127540.1-201ENST00000580311 689 ntTSL 5 BASIC4.81□□□□□ -1.64
NPC1L1Q9UHC9 ZNF415P1-201ENST00000582279 1166 ntBASIC4.81□□□□□ -1.64
NPC1L1Q9UHC9 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC4.81□□□□□ -1.64
NPC1L1Q9UHC9 AC084373.1-201ENST00000603311 235 ntBASIC4.81□□□□□ -1.64
NPC1L1Q9UHC9 AP004372.1-201ENST00000604842 844 ntBASIC4.81□□□□□ -1.64
NPC1L1Q9UHC9 U3.45-201ENST00000607547 219 ntBASIC4.81□□□□□ -1.64
NPC1L1Q9UHC9 AC006946.3-201ENST00000609791 756 ntBASIC4.81□□□□□ -1.64
NPC1L1Q9UHC9 AC022149.2-201ENST00000621061 203 ntBASIC4.81□□□□□ -1.64
NPC1L1Q9UHC9 AC018816.2-201ENST00000621460 353 ntBASIC4.81□□□□□ -1.64
NPC1L1Q9UHC9 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
NPC1L1Q9UHC9 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC4.81□□□□□ -1.64
NPC1L1Q9UHC9 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC4.81□□□□□ -1.64
NPC1L1Q9UHC9 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC4.81□□□□□ -1.64
NPC1L1Q9UHC9 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC4.8□□□□□ -1.64
NPC1L1Q9UHC9 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC4.8□□□□□ -1.64
NPC1L1Q9UHC9 RNU6-178P-201ENST00000384631 104 ntBASIC4.8□□□□□ -1.64
NPC1L1Q9UHC9 RNU2-65P-201ENST00000410162 185 ntBASIC4.8□□□□□ -1.64
NPC1L1Q9UHC9 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC4.8□□□□□ -1.64
NPC1L1Q9UHC9 MTND2P2-201ENST00000434633 945 ntBASIC4.8□□□□□ -1.64
NPC1L1Q9UHC9 HSPD1P21-201ENST00000436541 245 ntBASIC4.8□□□□□ -1.64
NPC1L1Q9UHC9 HNRNPDLP3-201ENST00000456745 380 ntBASIC4.8□□□□□ -1.64
NPC1L1Q9UHC9 CAB39P1-201ENST00000502277 460 ntBASIC4.8□□□□□ -1.64
NPC1L1Q9UHC9 RNU6-760P-201ENST00000516078 97 ntBASIC4.8□□□□□ -1.64
NPC1L1Q9UHC9 OR5AP1P-201ENST00000529730 940 ntBASIC4.8□□□□□ -1.64
NPC1L1Q9UHC9 LINC02301-201ENST00000553760 773 ntTSL 3 BASIC4.8□□□□□ -1.64
NPC1L1Q9UHC9 AC092868.3-201ENST00000560515 784 ntBASIC4.8□□□□□ -1.64
NPC1L1Q9UHC9 MIR3922-201ENST00000585192 84 ntBASIC4.8□□□□□ -1.64
NPC1L1Q9UHC9 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC4.8□□□□□ -1.64
NPC1L1Q9UHC9 AC006116.10-201ENST00000591836 581 ntBASIC4.8□□□□□ -1.64
NPC1L1Q9UHC9 VN1R92P-201ENST00000598511 928 ntBASIC4.8□□□□□ -1.64
NPC1L1Q9UHC9 MTCO2P22-201ENST00000603246 681 ntBASIC4.8□□□□□ -1.64
NPC1L1Q9UHC9 AC012467.1-201ENST00000607740 256 ntBASIC4.8□□□□□ -1.64
NPC1L1Q9UHC9 AC009032.1-201ENST00000617574 431 ntBASIC4.8□□□□□ -1.64
NPC1L1Q9UHC9 AC019080.5-201ENST00000624891 757 ntBASIC4.8□□□□□ -1.64
NPC1L1Q9UHC9 TEX41-280ENST00000629185 591 ntTSL 5 BASIC4.8□□□□□ -1.64
NPC1L1Q9UHC9 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC4.8□□□□□ -1.64
NPC1L1Q9UHC9 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC4.8□□□□□ -1.64
NPC1L1Q9UHC9 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
NPC1L1Q9UHC9 MTCO1P12-201ENST00000414273 1543 ntBASIC4.8□□□□□ -1.64
NPC1L1Q9UHC9 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC4.8□□□□□ -1.64
NPC1L1Q9UHC9 AC068647.1-201ENST00000489539 2265 ntBASIC4.8□□□□□ -1.64
NPC1L1Q9UHC9 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
NPC1L1Q9UHC9 CEP170P1-201ENST00000502249 4587 ntBASIC4.8□□□□□ -1.64
NPC1L1Q9UHC9 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC4.8□□□□□ -1.64
NPC1L1Q9UHC9 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC4.8□□□□□ -1.64
NPC1L1Q9UHC9 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC4.8□□□□□ -1.64
NPC1L1Q9UHC9 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
NPC1L1Q9UHC9 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
NPC1L1Q9UHC9 TXN-201ENST00000374515 635 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
NPC1L1Q9UHC9 AMD1P2-201ENST00000412936 992 ntBASIC4.79□□□□□ -1.64
NPC1L1Q9UHC9 RPL23AP4-201ENST00000427757 463 ntBASIC4.79□□□□□ -1.64
NPC1L1Q9UHC9 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC4.79□□□□□ -1.64
NPC1L1Q9UHC9 AL606490.7-201ENST00000433136 191 ntBASIC4.79□□□□□ -1.64
NPC1L1Q9UHC9 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC4.79□□□□□ -1.64
NPC1L1Q9UHC9 RPS29P31-201ENST00000446147 164 ntBASIC4.79□□□□□ -1.64
NPC1L1Q9UHC9 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC4.79□□□□□ -1.64
NPC1L1Q9UHC9 MTCO3P16-201ENST00000454456 754 ntBASIC4.79□□□□□ -1.64
NPC1L1Q9UHC9 RN7SL293P-201ENST00000481765 281 ntBASIC4.79□□□□□ -1.64
NPC1L1Q9UHC9 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC4.79□□□□□ -1.64
NPC1L1Q9UHC9 HMGB1P47-201ENST00000511281 589 ntBASIC4.79□□□□□ -1.64
NPC1L1Q9UHC9 NARSP2-201ENST00000518524 679 ntBASIC4.79□□□□□ -1.64
NPC1L1Q9UHC9 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
NPC1L1Q9UHC9 AC026333.2-201ENST00000542164 106 ntBASIC4.79□□□□□ -1.64
NPC1L1Q9UHC9 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC4.79□□□□□ -1.64
NPC1L1Q9UHC9 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC4.79□□□□□ -1.64
NPC1L1Q9UHC9 AC037471.2-201ENST00000564941 598 ntBASIC4.79□□□□□ -1.64
NPC1L1Q9UHC9 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC4.79□□□□□ -1.64
NPC1L1Q9UHC9 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC4.79□□□□□ -1.64
NPC1L1Q9UHC9 AC010591.1-201ENST00000603941 649 ntBASIC4.79□□□□□ -1.64
NPC1L1Q9UHC9 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC4.79□□□□□ -1.64
NPC1L1Q9UHC9 MIR7851-201ENST00000610611 160 ntBASIC4.79□□□□□ -1.64
NPC1L1Q9UHC9 MIR7975-201ENST00000619350 68 ntBASIC4.79□□□□□ -1.64
NPC1L1Q9UHC9 LINC02246-204ENST00000625278 740 ntTSL 5 BASIC4.79□□□□□ -1.64
NPC1L1Q9UHC9 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC4.79□□□□□ -1.64
NPC1L1Q9UHC9 AC244258.1-201ENST00000637553 1071 ntBASIC4.79□□□□□ -1.64
NPC1L1Q9UHC9 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.79□□□□□ -1.64
NPC1L1Q9UHC9 MFSD8-236ENST00000641509 4050 ntBASIC4.79□□□□□ -1.64
NPC1L1Q9UHC9 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
NPC1L1Q9UHC9 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
NPC1L1Q9UHC9 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
NPC1L1Q9UHC9 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
NPC1L1Q9UHC9 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
NPC1L1Q9UHC9 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
NPC1L1Q9UHC9 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC4.79□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 116.7 ms