Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
CLCF1Q9UBD9 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC3.45□□□□□ -1.86
CLCF1Q9UBD9 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
CLCF1Q9UBD9 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
CLCF1Q9UBD9 MAPK10-372ENST00000641954 3413 ntBASIC3.45□□□□□ -1.86
CLCF1Q9UBD9 AC008725.1-201ENST00000605123 2263 ntBASIC3.45□□□□□ -1.86
CLCF1Q9UBD9 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
CLCF1Q9UBD9 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC3.44□□□□□ -1.86
CLCF1Q9UBD9 HSPA8P19-201ENST00000505359 1517 ntBASIC3.44□□□□□ -1.86
CLCF1Q9UBD9 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC3.44□□□□□ -1.86
CLCF1Q9UBD9 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC3.44□□□□□ -1.86
CLCF1Q9UBD9 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
CLCF1Q9UBD9 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
CLCF1Q9UBD9 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC3.44□□□□□ -1.86
CLCF1Q9UBD9 RNU6-792P-201ENST00000363490 107 ntBASIC3.44□□□□□ -1.86
CLCF1Q9UBD9 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
CLCF1Q9UBD9 U8.11-201ENST00000384699 133 ntBASIC3.44□□□□□ -1.86
CLCF1Q9UBD9 U8.12-201ENST00000384701 133 ntBASIC3.44□□□□□ -1.86
CLCF1Q9UBD9 ATP5F1P3-201ENST00000397213 657 ntBASIC3.44□□□□□ -1.86
CLCF1Q9UBD9 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC3.44□□□□□ -1.86
CLCF1Q9UBD9 RNU2-72P-201ENST00000411175 163 ntBASIC3.44□□□□□ -1.86
CLCF1Q9UBD9 AC234782.4-201ENST00000417646 1048 ntBASIC3.44□□□□□ -1.86
CLCF1Q9UBD9 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC3.44□□□□□ -1.86
CLCF1Q9UBD9 CYP4F29P-201ENST00000420685 446 ntBASIC3.44□□□□□ -1.86
CLCF1Q9UBD9 AC023128.2-201ENST00000420880 1223 ntBASIC3.44□□□□□ -1.86
CLCF1Q9UBD9 AL391219.1-201ENST00000422570 483 ntBASIC3.44□□□□□ -1.86
CLCF1Q9UBD9 AL591419.1-201ENST00000427423 339 ntBASIC3.44□□□□□ -1.86
CLCF1Q9UBD9 ELOCP18-201ENST00000434209 337 ntBASIC3.44□□□□□ -1.86
CLCF1Q9UBD9 ARL5AP2-201ENST00000444698 533 ntBASIC3.44□□□□□ -1.86
CLCF1Q9UBD9 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC3.44□□□□□ -1.86
CLCF1Q9UBD9 HMGB3P21-201ENST00000452483 547 ntBASIC3.44□□□□□ -1.86
CLCF1Q9UBD9 U8.18-201ENST00000459285 133 ntBASIC3.44□□□□□ -1.86
CLCF1Q9UBD9 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC3.44□□□□□ -1.86
CLCF1Q9UBD9 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC3.44□□□□□ -1.86
CLCF1Q9UBD9 AC027338.1-201ENST00000514840 825 ntBASIC3.44□□□□□ -1.86
CLCF1Q9UBD9 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC3.44□□□□□ -1.86
CLCF1Q9UBD9 VTA1P2-201ENST00000520205 911 ntBASIC3.44□□□□□ -1.86
CLCF1Q9UBD9 IGLVIV-66-1-201ENST00000521832 460 ntBASIC3.44□□□□□ -1.86
CLCF1Q9UBD9 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC3.44□□□□□ -1.86
CLCF1Q9UBD9 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC3.44□□□□□ -1.86
CLCF1Q9UBD9 AC079035.1-201ENST00000551713 848 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
CLCF1Q9UBD9 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC3.44□□□□□ -1.86
CLCF1Q9UBD9 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC3.44□□□□□ -1.86
CLCF1Q9UBD9 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC3.44□□□□□ -1.86
CLCF1Q9UBD9 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC3.44□□□□□ -1.86
CLCF1Q9UBD9 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC3.44□□□□□ -1.86
CLCF1Q9UBD9 CR392039.5-201ENST00000623201 510 ntBASIC3.44□□□□□ -1.86
CLCF1Q9UBD9 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC3.44□□□□□ -1.86
CLCF1Q9UBD9 AC012442.3-202ENST00000636742 206 ntBASIC3.44□□□□□ -1.86
CLCF1Q9UBD9 MIR6715B-201ENST00000637172 77 ntBASIC3.44□□□□□ -1.86
CLCF1Q9UBD9 OR8B1P-202ENST00000641132 1178 ntBASIC3.44□□□□□ -1.86
CLCF1Q9UBD9 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
CLCF1Q9UBD9 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC3.44□□□□□ -1.86
CLCF1Q9UBD9 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC3.44□□□□□ -1.86
CLCF1Q9UBD9 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
CLCF1Q9UBD9 Z73965.1-201ENST00000623412 2297 ntBASIC3.44□□□□□ -1.86
CLCF1Q9UBD9 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC3.43□□□□□ -1.86
CLCF1Q9UBD9 AC134882.1-201ENST00000603738 1676 ntBASIC3.43□□□□□ -1.86
CLCF1Q9UBD9 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC3.43□□□□□ -1.86
CLCF1Q9UBD9 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
CLCF1Q9UBD9 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
CLCF1Q9UBD9 AL049555.1-201ENST00000562834 1933 ntBASIC3.43□□□□□ -1.86
CLCF1Q9UBD9 AL512283.1-201ENST00000606756 1384 ntBASIC3.43□□□□□ -1.86
CLCF1Q9UBD9 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC3.43□□□□□ -1.86
CLCF1Q9UBD9 MIR23B-201ENST00000384832 97 ntBASIC3.43□□□□□ -1.86
CLCF1Q9UBD9 MIR3074-201ENST00000384885 81 ntBASIC3.43□□□□□ -1.86
CLCF1Q9UBD9 PTMAP2-201ENST00000397627 327 ntBASIC3.43□□□□□ -1.86
CLCF1Q9UBD9 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC3.43□□□□□ -1.86
CLCF1Q9UBD9 AC095032.2-201ENST00000414923 418 ntTSL 2 BASIC3.43□□□□□ -1.86
CLCF1Q9UBD9 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC3.43□□□□□ -1.86
CLCF1Q9UBD9 NPM1P34-201ENST00000428821 893 ntBASIC3.43□□□□□ -1.86
CLCF1Q9UBD9 RPS6P12-201ENST00000432491 726 ntBASIC3.43□□□□□ -1.86
CLCF1Q9UBD9 BMS1P19-201ENST00000433925 393 ntBASIC3.43□□□□□ -1.86
CLCF1Q9UBD9 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC3.43□□□□□ -1.86
CLCF1Q9UBD9 RPS17P13-201ENST00000448974 407 ntBASIC3.43□□□□□ -1.86
CLCF1Q9UBD9 AL121718.1-201ENST00000449463 387 ntTSL 3 BASIC3.43□□□□□ -1.86
CLCF1Q9UBD9 ACTR3P3-201ENST00000480448 893 ntBASIC3.43□□□□□ -1.86
CLCF1Q9UBD9 RPL7P24-201ENST00000493052 752 ntBASIC3.43□□□□□ -1.86
CLCF1Q9UBD9 AC023050.1-201ENST00000498198 304 ntBASIC3.43□□□□□ -1.86
CLCF1Q9UBD9 LINC01612-201ENST00000504509 469 ntTSL 3 BASIC3.43□□□□□ -1.86
CLCF1Q9UBD9 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC3.43□□□□□ -1.86
CLCF1Q9UBD9 AC008628.1-201ENST00000508663 265 ntBASIC3.43□□□□□ -1.86
CLCF1Q9UBD9 AC133963.2-201ENST00000513686 578 ntBASIC3.43□□□□□ -1.86
CLCF1Q9UBD9 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC3.43□□□□□ -1.86
CLCF1Q9UBD9 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC3.43□□□□□ -1.86
CLCF1Q9UBD9 AC104350.1-201ENST00000518750 877 ntTSL 3 BASIC3.43□□□□□ -1.86
CLCF1Q9UBD9 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC3.43□□□□□ -1.86
CLCF1Q9UBD9 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.43□□□□□ -1.86
CLCF1Q9UBD9 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
CLCF1Q9UBD9 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC3.43□□□□□ -1.86
CLCF1Q9UBD9 AC074050.1-201ENST00000563247 211 ntBASIC3.43□□□□□ -1.86
CLCF1Q9UBD9 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC3.43□□□□□ -1.86
CLCF1Q9UBD9 PCNAP1-202ENST00000595299 752 ntBASIC3.43□□□□□ -1.86
CLCF1Q9UBD9 AC004825.2-201ENST00000616634 455 ntBASIC3.43□□□□□ -1.86
CLCF1Q9UBD9 AC067852.7-201ENST00000623270 535 ntBASIC3.43□□□□□ -1.86
CLCF1Q9UBD9 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC3.43□□□□□ -1.86
CLCF1Q9UBD9 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC3.43□□□□□ -1.86
CLCF1Q9UBD9 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC3.43□□□□□ -1.86
CLCF1Q9UBD9 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC3.43□□□□□ -1.86
CLCF1Q9UBD9 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 124.4 ms