Protein–RNA interactions for Protein: Q9NPC3

CCNB1IP1, E3 ubiquitin-protein ligase CCNB1IP1, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNB1IP1Q9NPC3 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC3.58□□□□□ -1.84
CCNB1IP1Q9NPC3 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
CCNB1IP1Q9NPC3 GABPAP-201ENST00000419271 1356 ntBASIC3.58□□□□□ -1.84
CCNB1IP1Q9NPC3 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
CCNB1IP1Q9NPC3 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
CCNB1IP1Q9NPC3 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
CCNB1IP1Q9NPC3 AC119744.1-201ENST00000454746 1715 ntBASIC3.58□□□□□ -1.84
CCNB1IP1Q9NPC3 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
CCNB1IP1Q9NPC3 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
CCNB1IP1Q9NPC3 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
CCNB1IP1Q9NPC3 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
CCNB1IP1Q9NPC3 SNORA62-201ENST00000365493 153 ntBASIC3.57□□□□□ -1.84
CCNB1IP1Q9NPC3 AC083799.1-201ENST00000366451 910 ntBASIC3.57□□□□□ -1.84
CCNB1IP1Q9NPC3 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC3.57□□□□□ -1.84
CCNB1IP1Q9NPC3 ENSAP1-201ENST00000392855 326 ntBASIC3.57□□□□□ -1.84
CCNB1IP1Q9NPC3 AL049693.1-201ENST00000402760 611 ntBASIC3.57□□□□□ -1.84
CCNB1IP1Q9NPC3 AL391417.1-201ENST00000404100 426 ntBASIC3.57□□□□□ -1.84
CCNB1IP1Q9NPC3 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC3.57□□□□□ -1.84
CCNB1IP1Q9NPC3 HSPE1P12-201ENST00000412576 301 ntBASIC3.57□□□□□ -1.84
CCNB1IP1Q9NPC3 NUP35P2-201ENST00000416748 943 ntBASIC3.57□□□□□ -1.84
CCNB1IP1Q9NPC3 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC3.57□□□□□ -1.84
CCNB1IP1Q9NPC3 AL133419.1-201ENST00000423153 640 ntTSL 3 BASIC3.57□□□□□ -1.84
CCNB1IP1Q9NPC3 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
CCNB1IP1Q9NPC3 OR4F13P-201ENST00000428478 931 ntBASIC3.57□□□□□ -1.84
CCNB1IP1Q9NPC3 MRPL50P1-201ENST00000431951 384 ntBASIC3.57□□□□□ -1.84
CCNB1IP1Q9NPC3 TNPO1P3-201ENST00000436471 2662 ntBASIC3.57□□□□□ -1.84
CCNB1IP1Q9NPC3 AC099677.4-201ENST00000446786 380 ntTSL 3 BASIC3.57□□□□□ -1.84
CCNB1IP1Q9NPC3 RPS23P7-201ENST00000466210 444 ntBASIC3.57□□□□□ -1.84
CCNB1IP1Q9NPC3 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC3.57□□□□□ -1.84
CCNB1IP1Q9NPC3 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC3.57□□□□□ -1.84
CCNB1IP1Q9NPC3 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC3.57□□□□□ -1.84
CCNB1IP1Q9NPC3 AC013549.2-201ENST00000526953 489 ntTSL 3 BASIC3.57□□□□□ -1.84
CCNB1IP1Q9NPC3 AC004923.2-201ENST00000529649 369 ntBASIC3.57□□□□□ -1.84
CCNB1IP1Q9NPC3 CYCSP29-201ENST00000533731 318 ntBASIC3.57□□□□□ -1.84
CCNB1IP1Q9NPC3 OR8L1P-201ENST00000534005 955 ntBASIC3.57□□□□□ -1.84
CCNB1IP1Q9NPC3 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC3.57□□□□□ -1.84
CCNB1IP1Q9NPC3 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC3.57□□□□□ -1.84
CCNB1IP1Q9NPC3 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC3.57□□□□□ -1.84
CCNB1IP1Q9NPC3 MIR4425-201ENST00000580572 84 ntBASIC3.57□□□□□ -1.84
CCNB1IP1Q9NPC3 AC023932.1-201ENST00000582726 429 ntTSL 3 BASIC3.57□□□□□ -1.84
CCNB1IP1Q9NPC3 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC3.57□□□□□ -1.84
CCNB1IP1Q9NPC3 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC3.57□□□□□ -1.84
CCNB1IP1Q9NPC3 AC005962.2-201ENST00000611427 652 ntBASIC3.57□□□□□ -1.84
CCNB1IP1Q9NPC3 AC121761.2-201ENST00000617300 689 ntBASIC3.57□□□□□ -1.84
CCNB1IP1Q9NPC3 MIR6758-201ENST00000620653 63 ntBASIC3.57□□□□□ -1.84
CCNB1IP1Q9NPC3 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC3.57□□□□□ -1.84
CCNB1IP1Q9NPC3 MIR6830-201ENST00000636015 70 ntBASIC3.57□□□□□ -1.84
CCNB1IP1Q9NPC3 MIR4278-201ENST00000636094 69 ntBASIC3.57□□□□□ -1.84
CCNB1IP1Q9NPC3 FAM49B-230ENST00000639004 837 ntTSL 5 BASIC3.57□□□□□ -1.84
CCNB1IP1Q9NPC3 FAM157B-203ENST00000639350 358 ntBASIC3.57□□□□□ -1.84
CCNB1IP1Q9NPC3 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
CCNB1IP1Q9NPC3 OR2M2-202ENST00000641211 1229 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
CCNB1IP1Q9NPC3 OR1S2-202ENST00000641683 941 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
CCNB1IP1Q9NPC3 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
CCNB1IP1Q9NPC3 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.57□□□□□ -1.84
CCNB1IP1Q9NPC3 USP8P1-201ENST00000494673 3183 ntBASIC3.57□□□□□ -1.84
CCNB1IP1Q9NPC3 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
CCNB1IP1Q9NPC3 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC3.56□□□□□ -1.84
CCNB1IP1Q9NPC3 AC000367.1-201ENST00000452711 1766 ntBASIC3.56□□□□□ -1.84
CCNB1IP1Q9NPC3 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
CCNB1IP1Q9NPC3 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
CCNB1IP1Q9NPC3 AL592494.2-201ENST00000425455 1548 ntBASIC3.56□□□□□ -1.84
CCNB1IP1Q9NPC3 SEPT7P7-201ENST00000420492 1301 ntBASIC3.56□□□□□ -1.84
CCNB1IP1Q9NPC3 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC3.56□□□□□ -1.84
CCNB1IP1Q9NPC3 MIR142-201ENST00000384835 87 ntBASIC3.56□□□□□ -1.84
CCNB1IP1Q9NPC3 MIR184-201ENST00000384962 84 ntBASIC3.56□□□□□ -1.84
CCNB1IP1Q9NPC3 RNU6-328P-201ENST00000390887 106 ntBASIC3.56□□□□□ -1.84
CCNB1IP1Q9NPC3 MIR1303-201ENST00000408625 86 ntBASIC3.56□□□□□ -1.84
CCNB1IP1Q9NPC3 RN7SKP33-201ENST00000410942 340 ntBASIC3.56□□□□□ -1.84
CCNB1IP1Q9NPC3 SNORA57.3-201ENST00000411095 141 ntBASIC3.56□□□□□ -1.84
CCNB1IP1Q9NPC3 COX6CP17-201ENST00000421389 185 ntBASIC3.56□□□□□ -1.84
CCNB1IP1Q9NPC3 AL138789.1-201ENST00000425820 960 ntTSL 2 BASIC3.56□□□□□ -1.84
CCNB1IP1Q9NPC3 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC3.56□□□□□ -1.84
CCNB1IP1Q9NPC3 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC3.56□□□□□ -1.84
CCNB1IP1Q9NPC3 AL590623.1-201ENST00000427864 105 ntBASIC3.56□□□□□ -1.84
CCNB1IP1Q9NPC3 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
CCNB1IP1Q9NPC3 HMGB3P5-201ENST00000428894 612 ntBASIC3.56□□□□□ -1.84
CCNB1IP1Q9NPC3 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC3.56□□□□□ -1.84
CCNB1IP1Q9NPC3 H2AFZP6-201ENST00000444403 394 ntBASIC3.56□□□□□ -1.84
CCNB1IP1Q9NPC3 HMGB1P48-201ENST00000446155 598 ntBASIC3.56□□□□□ -1.84
CCNB1IP1Q9NPC3 TPT1P12-201ENST00000448968 492 ntBASIC3.56□□□□□ -1.84
CCNB1IP1Q9NPC3 RPL23AP14-201ENST00000468281 468 ntBASIC3.56□□□□□ -1.84
CCNB1IP1Q9NPC3 SNRPGP3-201ENST00000469405 227 ntBASIC3.56□□□□□ -1.84
CCNB1IP1Q9NPC3 AC126121.1-201ENST00000482313 553 ntBASIC3.56□□□□□ -1.84
CCNB1IP1Q9NPC3 TRBV12-2-201ENST00000489763 344 ntBASIC3.56□□□□□ -1.84
CCNB1IP1Q9NPC3 AC026979.1-201ENST00000492525 396 ntBASIC3.56□□□□□ -1.84
CCNB1IP1Q9NPC3 CEACAMP10-202ENST00000495431 496 ntBASIC3.56□□□□□ -1.84
CCNB1IP1Q9NPC3 RPL7P47-201ENST00000497299 556 ntBASIC3.56□□□□□ -1.84
CCNB1IP1Q9NPC3 AC005921.1-201ENST00000510589 286 ntBASIC3.56□□□□□ -1.84
CCNB1IP1Q9NPC3 RN7SKP277-201ENST00000516895 283 ntBASIC3.56□□□□□ -1.84
CCNB1IP1Q9NPC3 AC022784.5-201ENST00000522241 437 ntBASIC3.56□□□□□ -1.84
CCNB1IP1Q9NPC3 HIGD1AP5-201ENST00000529959 259 ntBASIC3.56□□□□□ -1.84
CCNB1IP1Q9NPC3 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC3.56□□□□□ -1.84
CCNB1IP1Q9NPC3 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
CCNB1IP1Q9NPC3 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC3.56□□□□□ -1.84
CCNB1IP1Q9NPC3 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC3.56□□□□□ -1.84
CCNB1IP1Q9NPC3 RMST_8.1-201ENST00000610287 165 ntBASIC3.56□□□□□ -1.84
CCNB1IP1Q9NPC3 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
CCNB1IP1Q9NPC3 AC090506.2-201ENST00000624521 419 ntBASIC3.56□□□□□ -1.84
CCNB1IP1Q9NPC3 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC3.56□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 83.9 ms