Protein–RNA interactions for Protein: Q9H270

VPS11, Vacuolar protein sorting-associated protein 11 homolog, humanhuman

Predictions only

Length 941 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11Q9H270 AL499605.1-201ENST00000604628 403 ntBASIC5.28□□□□□ -1.56
VPS11Q9H270 AL162431.4-201ENST00000604674 411 ntBASIC5.28□□□□□ -1.56
VPS11Q9H270 AC011626.1-201ENST00000604710 562 ntBASIC5.28□□□□□ -1.56
VPS11Q9H270 AC018695.5-201ENST00000605872 315 ntBASIC5.28□□□□□ -1.56
VPS11Q9H270 AL160400.1-201ENST00000606385 1030 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
VPS11Q9H270 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC5.28□□□□□ -1.56
VPS11Q9H270 LRRC77P-213ENST00000637727 880 ntBASIC5.28□□□□□ -1.56
VPS11Q9H270 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC5.28□□□□□ -1.56
VPS11Q9H270 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
VPS11Q9H270 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC5.28□□□□□ -1.56
VPS11Q9H270 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
VPS11Q9H270 MED23-203ENST00000368058 4576 ntTSL 5 BASIC5.28□□□□□ -1.56
VPS11Q9H270 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
VPS11Q9H270 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
VPS11Q9H270 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
VPS11Q9H270 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
VPS11Q9H270 AC021242.1-201ENST00000507315 2035 ntBASIC5.28□□□□□ -1.56
VPS11Q9H270 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
VPS11Q9H270 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
VPS11Q9H270 CD86-204ENST00000469710 1604 ntTSL 2 BASIC5.27□□□□□ -1.57
VPS11Q9H270 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
VPS11Q9H270 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
VPS11Q9H270 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC5.27□□□□□ -1.57
VPS11Q9H270 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC5.27□□□□□ -1.57
VPS11Q9H270 OR10J6P-201ENST00000289731 930 ntBASIC5.27□□□□□ -1.57
VPS11Q9H270 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
VPS11Q9H270 RNA5SP223-201ENST00000365174 120 ntBASIC5.27□□□□□ -1.57
VPS11Q9H270 PRH2-201ENST00000381847 641 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
VPS11Q9H270 MIR589-201ENST00000385238 99 ntBASIC5.27□□□□□ -1.57
VPS11Q9H270 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
VPS11Q9H270 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
VPS11Q9H270 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
VPS11Q9H270 AL031119.1-201ENST00000404707 1879 ntBASIC5.27□□□□□ -1.57
VPS11Q9H270 CIR1P3-201ENST00000405137 479 ntBASIC5.27□□□□□ -1.57
VPS11Q9H270 Z93019.1-201ENST00000416450 973 ntBASIC5.27□□□□□ -1.57
VPS11Q9H270 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC5.27□□□□□ -1.57
VPS11Q9H270 FABP7P1-201ENST00000424004 391 ntBASIC5.27□□□□□ -1.57
VPS11Q9H270 RPL34P6-201ENST00000432390 345 ntBASIC5.27□□□□□ -1.57
VPS11Q9H270 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC5.27□□□□□ -1.57
VPS11Q9H270 AC008072.1-201ENST00000434254 824 ntBASIC5.27□□□□□ -1.57
VPS11Q9H270 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC5.27□□□□□ -1.57
VPS11Q9H270 RPL35AP21-201ENST00000437667 333 ntBASIC5.27□□□□□ -1.57
VPS11Q9H270 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC5.27□□□□□ -1.57
VPS11Q9H270 MTATP6P30-201ENST00000443540 664 ntBASIC5.27□□□□□ -1.57
VPS11Q9H270 HMGB1P16-201ENST00000447155 540 ntBASIC5.27□□□□□ -1.57
VPS11Q9H270 Z99127.3-201ENST00000448158 395 ntBASIC5.27□□□□□ -1.57
VPS11Q9H270 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC5.27□□□□□ -1.57
VPS11Q9H270 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC5.27□□□□□ -1.57
VPS11Q9H270 RNA5SP269-201ENST00000459032 137 ntBASIC5.27□□□□□ -1.57
VPS11Q9H270 RPL21P71-201ENST00000465598 459 ntBASIC5.27□□□□□ -1.57
VPS11Q9H270 RBM43P1-201ENST00000476891 1081 ntBASIC5.27□□□□□ -1.57
VPS11Q9H270 RPL30P11-201ENST00000495304 339 ntBASIC5.27□□□□□ -1.57
VPS11Q9H270 RN7SL591P-201ENST00000496150 292 ntBASIC5.27□□□□□ -1.57
VPS11Q9H270 MTCYBP18-201ENST00000501056 747 ntBASIC5.27□□□□□ -1.57
VPS11Q9H270 SEMA6A-AS1-202ENST00000508424 862 ntTSL 3 BASIC5.27□□□□□ -1.57
VPS11Q9H270 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC5.27□□□□□ -1.57
VPS11Q9H270 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC5.27□□□□□ -1.57
VPS11Q9H270 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC5.27□□□□□ -1.57
VPS11Q9H270 RN7SKP96-201ENST00000516948 297 ntBASIC5.27□□□□□ -1.57
VPS11Q9H270 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC5.27□□□□□ -1.57
VPS11Q9H270 IGHVII-60-1-201ENST00000519079 256 ntBASIC5.27□□□□□ -1.57
VPS11Q9H270 NRBF2P4-201ENST00000520874 850 ntBASIC5.27□□□□□ -1.57
VPS11Q9H270 UQCRB-209ENST00000523920 695 ntTSL 5 BASIC5.27□□□□□ -1.57
VPS11Q9H270 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC5.27□□□□□ -1.57
VPS11Q9H270 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC5.27□□□□□ -1.57
VPS11Q9H270 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC5.27□□□□□ -1.57
VPS11Q9H270 MIR3912-201ENST00000577566 105 ntBASIC5.27□□□□□ -1.57
VPS11Q9H270 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC5.27□□□□□ -1.57
VPS11Q9H270 MIR4528-201ENST00000577763 90 ntBASIC5.27□□□□□ -1.57
VPS11Q9H270 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC5.27□□□□□ -1.57
VPS11Q9H270 RN7SL435P-201ENST00000584418 282 ntBASIC5.27□□□□□ -1.57
VPS11Q9H270 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC5.27□□□□□ -1.57
VPS11Q9H270 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC5.27□□□□□ -1.57
VPS11Q9H270 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
VPS11Q9H270 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
VPS11Q9H270 Z98200.1-201ENST00000607298 470 ntBASIC5.27□□□□□ -1.57
VPS11Q9H270 AC135507.2-201ENST00000612443 309 ntBASIC5.27□□□□□ -1.57
VPS11Q9H270 USP12-203ENST00000620323 349 ntTSL 3 BASIC5.27□□□□□ -1.57
VPS11Q9H270 LINC01320-210ENST00000626008 929 ntTSL 5 BASIC5.27□□□□□ -1.57
VPS11Q9H270 LINC01206-233ENST00000630063 878 ntTSL 5 BASIC5.27□□□□□ -1.57
VPS11Q9H270 AC092574.2-201ENST00000631198 753 ntTSL 3 BASIC5.27□□□□□ -1.57
VPS11Q9H270 AC024614.3-201ENST00000637860 256 ntBASIC5.27□□□□□ -1.57
VPS11Q9H270 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
VPS11Q9H270 FAP-203ENST00000443424 2598 ntTSL 2 BASIC5.27□□□□□ -1.57
VPS11Q9H270 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
VPS11Q9H270 AC090971.4-201ENST00000560291 1800 ntBASIC5.27□□□□□ -1.57
VPS11Q9H270 AC063976.2-201ENST00000425667 3556 ntBASIC5.27□□□□□ -1.57
VPS11Q9H270 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC5.27□□□□□ -1.57
VPS11Q9H270 LINC01361-202ENST00000452834 1526 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
VPS11Q9H270 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC5.27□□□□□ -1.57
VPS11Q9H270 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC5.27□□□□□ -1.57
VPS11Q9H270 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
VPS11Q9H270 ZNF652P1-201ENST00000442420 1309 ntBASIC5.26□□□□□ -1.57
VPS11Q9H270 AC235565.1-201ENST00000456962 1325 ntBASIC5.26□□□□□ -1.57
VPS11Q9H270 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
VPS11Q9H270 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
VPS11Q9H270 AP001642.1-201ENST00000624727 2117 ntBASIC5.26□□□□□ -1.57
VPS11Q9H270 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC5.26□□□□□ -1.57
VPS11Q9H270 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC5.26□□□□□ -1.57
VPS11Q9H270 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC5.26□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 122 ms