Protein–RNA interactions for Protein: Q9C037

TRIM4, E3 ubiquitin-protein ligase TRIM4, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4Q9C037 AC008481.1-201ENST00000463278 396 ntBASIC3.82□□□□□ -1.8
TRIM4Q9C037 ARL2BPP6-201ENST00000512757 439 ntBASIC3.82□□□□□ -1.8
TRIM4Q9C037 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC3.82□□□□□ -1.8
TRIM4Q9C037 RNU1-95P-201ENST00000516357 160 ntBASIC3.82□□□□□ -1.8
TRIM4Q9C037 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.82□□□□□ -1.8
TRIM4Q9C037 RNU1-128P-201ENST00000516704 160 ntBASIC3.82□□□□□ -1.8
TRIM4Q9C037 RN7SKP289-201ENST00000517244 295 ntBASIC3.82□□□□□ -1.8
TRIM4Q9C037 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC3.82□□□□□ -1.8
TRIM4Q9C037 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC3.82□□□□□ -1.8
TRIM4Q9C037 AC007014.1-201ENST00000572828 610 ntTSL 3 BASIC3.82□□□□□ -1.8
TRIM4Q9C037 MIR4425-201ENST00000580572 84 ntBASIC3.82□□□□□ -1.8
TRIM4Q9C037 AC012417.1-201ENST00000582307 1039 ntBASIC3.82□□□□□ -1.8
TRIM4Q9C037 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC3.82□□□□□ -1.8
TRIM4Q9C037 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC3.82□□□□□ -1.8
TRIM4Q9C037 HAUS1-203ENST00000585518 506 ntTSL 5 BASIC3.82□□□□□ -1.8
TRIM4Q9C037 AC105094.2-202ENST00000590968 566 ntTSL 2 BASIC3.82□□□□□ -1.8
TRIM4Q9C037 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC3.82□□□□□ -1.8
TRIM4Q9C037 AL049844.2-201ENST00000604280 628 ntBASIC3.82□□□□□ -1.8
TRIM4Q9C037 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC3.82□□□□□ -1.8
TRIM4Q9C037 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
TRIM4Q9C037 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
TRIM4Q9C037 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC3.81□□□□□ -1.8
TRIM4Q9C037 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
TRIM4Q9C037 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
TRIM4Q9C037 RNU6-1331P-201ENST00000363658 106 ntBASIC3.81□□□□□ -1.8
TRIM4Q9C037 MIR30B-201ENST00000384850 88 ntBASIC3.81□□□□□ -1.8
TRIM4Q9C037 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC3.81□□□□□ -1.8
TRIM4Q9C037 LIPT1P1-201ENST00000415870 1186 ntBASIC3.81□□□□□ -1.8
TRIM4Q9C037 AL157400.3-201ENST00000449882 1298 ntTSL 5 BASIC3.81□□□□□ -1.8
TRIM4Q9C037 SNRPGP3-201ENST00000469405 227 ntBASIC3.81□□□□□ -1.8
TRIM4Q9C037 AP002884.2-201ENST00000471647 395 ntBASIC3.81□□□□□ -1.8
TRIM4Q9C037 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC3.81□□□□□ -1.8
TRIM4Q9C037 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC3.81□□□□□ -1.8
TRIM4Q9C037 C5orf46-203ENST00000515291 573 ntAPPRIS ALT1 TSL 1 (best) BASIC3.81□□□□□ -1.8
TRIM4Q9C037 RN7SKP141-201ENST00000516167 338 ntBASIC3.81□□□□□ -1.8
TRIM4Q9C037 RN7SKP60-201ENST00000516985 239 ntBASIC3.81□□□□□ -1.8
TRIM4Q9C037 AC090136.1-201ENST00000520009 240 ntBASIC3.81□□□□□ -1.8
TRIM4Q9C037 PTS-202ENST00000524931 696 ntTSL 3 BASIC3.81□□□□□ -1.8
TRIM4Q9C037 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC3.81□□□□□ -1.8
TRIM4Q9C037 GTF2IP22-201ENST00000554443 182 ntBASIC3.81□□□□□ -1.8
TRIM4Q9C037 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC3.81□□□□□ -1.8
TRIM4Q9C037 VN1R81P-201ENST00000602085 372 ntBASIC3.81□□□□□ -1.8
TRIM4Q9C037 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC3.81□□□□□ -1.8
TRIM4Q9C037 AC005972.3-201ENST00000606304 481 ntBASIC3.81□□□□□ -1.8
TRIM4Q9C037 AC011816.2-201ENST00000607089 556 ntBASIC3.81□□□□□ -1.8
TRIM4Q9C037 MIR8058-201ENST00000615737 89 ntBASIC3.81□□□□□ -1.8
TRIM4Q9C037 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC3.81□□□□□ -1.8
TRIM4Q9C037 U6.105-201ENST00000637379 88 ntBASIC3.81□□□□□ -1.8
TRIM4Q9C037 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
TRIM4Q9C037 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
TRIM4Q9C037 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
TRIM4Q9C037 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.81□□□□□ -1.8
TRIM4Q9C037 AC091152.2-201ENST00000591628 2569 ntBASIC3.81□□□□□ -1.8
TRIM4Q9C037 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
TRIM4Q9C037 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
TRIM4Q9C037 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
TRIM4Q9C037 PWAR6-201ENST00000552334 4618 ntBASIC3.8□□□□□ -1.8
TRIM4Q9C037 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
TRIM4Q9C037 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
TRIM4Q9C037 AC138915.3-201ENST00000562908 1389 ntBASIC3.8□□□□□ -1.8
TRIM4Q9C037 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
TRIM4Q9C037 U3.15-201ENST00000365398 212 ntBASIC3.8□□□□□ -1.8
TRIM4Q9C037 LIX1L-AS1-201ENST00000366105 377 ntTSL 5 BASIC3.8□□□□□ -1.8
TRIM4Q9C037 OR6C1-201ENST00000379668 1064 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
TRIM4Q9C037 MIR183-201ENST00000384958 110 ntBASIC3.8□□□□□ -1.8
TRIM4Q9C037 HSPE1P8-201ENST00000406997 288 ntBASIC3.8□□□□□ -1.8
TRIM4Q9C037 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC3.8□□□□□ -1.8
TRIM4Q9C037 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC3.8□□□□□ -1.8
TRIM4Q9C037 G6PC2-203ENST00000421979 494 ntTSL 3 BASIC3.8□□□□□ -1.8
TRIM4Q9C037 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC3.8□□□□□ -1.8
TRIM4Q9C037 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC3.8□□□□□ -1.8
TRIM4Q9C037 RPL23AP46-201ENST00000438548 490 ntBASIC3.8□□□□□ -1.8
TRIM4Q9C037 TMED11P-201ENST00000479478 690 ntBASIC3.8□□□□□ -1.8
TRIM4Q9C037 RPL7P24-201ENST00000493052 752 ntBASIC3.8□□□□□ -1.8
TRIM4Q9C037 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC3.8□□□□□ -1.8
TRIM4Q9C037 NADK2-AS1-201ENST00000501794 720 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
TRIM4Q9C037 AC021180.1-201ENST00000508581 558 ntTSL 4 BASIC3.8□□□□□ -1.8
TRIM4Q9C037 AC092747.2-201ENST00000545069 983 ntBASIC3.8□□□□□ -1.8
TRIM4Q9C037 AC008011.1-201ENST00000545989 227 ntBASIC3.8□□□□□ -1.8
TRIM4Q9C037 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC3.8□□□□□ -1.8
TRIM4Q9C037 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC3.8□□□□□ -1.8
TRIM4Q9C037 FAM106CP-201ENST00000582212 507 ntBASIC3.8□□□□□ -1.8
TRIM4Q9C037 AC011492.1-201ENST00000600023 315 ntBASIC3.8□□□□□ -1.8
TRIM4Q9C037 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC3.8□□□□□ -1.8
TRIM4Q9C037 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC3.8□□□□□ -1.8
TRIM4Q9C037 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
TRIM4Q9C037 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.8□□□□□ -1.8
TRIM4Q9C037 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
TRIM4Q9C037 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
TRIM4Q9C037 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
TRIM4Q9C037 AL353746.1-201ENST00000566293 6881 ntBASIC3.79□□□□□ -1.8
TRIM4Q9C037 CDKN3-203ENST00000395577 637 ntTSL 5 BASIC3.79□□□□□ -1.8
TRIM4Q9C037 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
TRIM4Q9C037 TPT1P2-201ENST00000413105 503 ntBASIC3.79□□□□□ -1.8
TRIM4Q9C037 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC3.79□□□□□ -1.8
TRIM4Q9C037 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC3.79□□□□□ -1.8
TRIM4Q9C037 RPL7P1-201ENST00000468161 747 ntBASIC3.79□□□□□ -1.8
TRIM4Q9C037 AC019133.1-201ENST00000508292 420 ntTSL 3 BASIC3.79□□□□□ -1.8
TRIM4Q9C037 LEF1-218ENST00000512172 598 ntTSL 2 BASIC3.79□□□□□ -1.8
TRIM4Q9C037 RN7SKP83-201ENST00000516512 178 ntBASIC3.79□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 80.6 ms