Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 U8.12-201ENST00000384701 133 ntBASIC4.3□□□□□ -1.72
UPF3BQ9BZI7 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
UPF3BQ9BZI7 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC4.3□□□□□ -1.72
UPF3BQ9BZI7 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC4.3□□□□□ -1.72
UPF3BQ9BZI7 SDCBPP2-201ENST00000424643 885 ntBASIC4.3□□□□□ -1.72
UPF3BQ9BZI7 RPL23AP4-201ENST00000427757 463 ntBASIC4.3□□□□□ -1.72
UPF3BQ9BZI7 HMGN2P31-201ENST00000432430 273 ntBASIC4.3□□□□□ -1.72
UPF3BQ9BZI7 BTG3P1-201ENST00000435859 716 ntBASIC4.3□□□□□ -1.72
UPF3BQ9BZI7 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC4.3□□□□□ -1.72
UPF3BQ9BZI7 AC009263.1-201ENST00000441193 1239 ntBASIC4.3□□□□□ -1.72
UPF3BQ9BZI7 U8.18-201ENST00000459285 133 ntBASIC4.3□□□□□ -1.72
UPF3BQ9BZI7 RPL32P34-201ENST00000486380 400 ntBASIC4.3□□□□□ -1.72
UPF3BQ9BZI7 AL358832.1-201ENST00000497800 389 ntBASIC4.3□□□□□ -1.72
UPF3BQ9BZI7 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
UPF3BQ9BZI7 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC4.3□□□□□ -1.72
UPF3BQ9BZI7 FTH1P9-201ENST00000513251 355 ntBASIC4.3□□□□□ -1.72
UPF3BQ9BZI7 SNORD116-26-201ENST00000516006 96 ntBASIC4.3□□□□□ -1.72
UPF3BQ9BZI7 AC027281.1-201ENST00000574178 758 ntBASIC4.3□□□□□ -1.72
UPF3BQ9BZI7 AC023932.1-201ENST00000582726 429 ntTSL 3 BASIC4.3□□□□□ -1.72
UPF3BQ9BZI7 MIR5187-201ENST00000583479 76 ntBASIC4.3□□□□□ -1.72
UPF3BQ9BZI7 ELOCP35-201ENST00000604289 336 ntBASIC4.3□□□□□ -1.72
UPF3BQ9BZI7 OR2BH1P-201ENST00000608850 864 ntBASIC4.3□□□□□ -1.72
UPF3BQ9BZI7 AL732618.1-201ENST00000623251 301 ntBASIC4.3□□□□□ -1.72
UPF3BQ9BZI7 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC4.3□□□□□ -1.72
UPF3BQ9BZI7 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC4.3□□□□□ -1.72
UPF3BQ9BZI7 MTCO1P12-201ENST00000414273 1543 ntBASIC4.3□□□□□ -1.72
UPF3BQ9BZI7 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
UPF3BQ9BZI7 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
UPF3BQ9BZI7 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
UPF3BQ9BZI7 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
UPF3BQ9BZI7 SNORD3H-201ENST00000384486 214 ntBASIC4.29□□□□□ -1.72
UPF3BQ9BZI7 MIR183-201ENST00000384958 110 ntBASIC4.29□□□□□ -1.72
UPF3BQ9BZI7 RPS29P4-201ENST00000414733 161 ntBASIC4.29□□□□□ -1.72
UPF3BQ9BZI7 AC062031.1-201ENST00000414967 747 ntTSL 3 BASIC4.29□□□□□ -1.72
UPF3BQ9BZI7 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC4.29□□□□□ -1.72
UPF3BQ9BZI7 OR4K6P-201ENST00000416478 897 ntBASIC4.29□□□□□ -1.72
UPF3BQ9BZI7 AC245054.1-201ENST00000420944 258 ntBASIC4.29□□□□□ -1.72
UPF3BQ9BZI7 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC4.29□□□□□ -1.72
UPF3BQ9BZI7 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
UPF3BQ9BZI7 AC007967.1-201ENST00000455422 1159 ntBASIC4.29□□□□□ -1.72
UPF3BQ9BZI7 HNRNPDLP3-201ENST00000456745 380 ntBASIC4.29□□□□□ -1.72
UPF3BQ9BZI7 FCF1P3-201ENST00000496394 590 ntBASIC4.29□□□□□ -1.72
UPF3BQ9BZI7 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC4.29□□□□□ -1.72
UPF3BQ9BZI7 HMGN1P11-201ENST00000508668 303 ntBASIC4.29□□□□□ -1.72
UPF3BQ9BZI7 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC4.29□□□□□ -1.72
UPF3BQ9BZI7 AC119751.5-201ENST00000514077 770 ntBASIC4.29□□□□□ -1.72
UPF3BQ9BZI7 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC4.29□□□□□ -1.72
UPF3BQ9BZI7 SOD1P3-201ENST00000518682 454 ntBASIC4.29□□□□□ -1.72
UPF3BQ9BZI7 AP006245.1-201ENST00000522549 120 ntBASIC4.29□□□□□ -1.72
UPF3BQ9BZI7 AL355432.1-201ENST00000522960 564 ntTSL 3 BASIC4.29□□□□□ -1.72
UPF3BQ9BZI7 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
UPF3BQ9BZI7 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC4.29□□□□□ -1.72
UPF3BQ9BZI7 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC4.29□□□□□ -1.72
UPF3BQ9BZI7 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC4.29□□□□□ -1.72
UPF3BQ9BZI7 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
UPF3BQ9BZI7 AC006077.1-201ENST00000604746 343 ntBASIC4.29□□□□□ -1.72
UPF3BQ9BZI7 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
UPF3BQ9BZI7 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
UPF3BQ9BZI7 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC4.29□□□□□ -1.72
UPF3BQ9BZI7 HSPA8P1-201ENST00000425843 1833 ntBASIC4.29□□□□□ -1.72
UPF3BQ9BZI7 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
UPF3BQ9BZI7 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC4.29□□□□□ -1.72
UPF3BQ9BZI7 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
UPF3BQ9BZI7 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC4.29□□□□□ -1.72
UPF3BQ9BZI7 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC4.29□□□□□ -1.72
UPF3BQ9BZI7 AC114546.3-201ENST00000623582 1734 ntBASIC4.29□□□□□ -1.72
UPF3BQ9BZI7 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC4.29□□□□□ -1.72
UPF3BQ9BZI7 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC4.29□□□□□ -1.72
UPF3BQ9BZI7 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
UPF3BQ9BZI7 AC123767.1-201ENST00000519537 1439 ntTSL 5 BASIC4.29□□□□□ -1.72
UPF3BQ9BZI7 RPS4XP5-202ENST00000449995 1334 ntBASIC4.28□□□□□ -1.72
UPF3BQ9BZI7 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC4.28□□□□□ -1.72
UPF3BQ9BZI7 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC4.28□□□□□ -1.72
UPF3BQ9BZI7 CDKN3-203ENST00000395577 637 ntTSL 5 BASIC4.28□□□□□ -1.72
UPF3BQ9BZI7 RPL21P17-201ENST00000397467 475 ntBASIC4.28□□□□□ -1.72
UPF3BQ9BZI7 AL136116.1-201ENST00000403591 381 ntBASIC4.28□□□□□ -1.72
UPF3BQ9BZI7 MTND4P22-201ENST00000413116 1169 ntBASIC4.28□□□□□ -1.72
UPF3BQ9BZI7 RPL30P2-201ENST00000414021 291 ntBASIC4.28□□□□□ -1.72
UPF3BQ9BZI7 SEC63P1-201ENST00000425785 1258 ntBASIC4.28□□□□□ -1.72
UPF3BQ9BZI7 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC4.28□□□□□ -1.72
UPF3BQ9BZI7 AC010655.1-201ENST00000449336 292 ntBASIC4.28□□□□□ -1.72
UPF3BQ9BZI7 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC4.28□□□□□ -1.72
UPF3BQ9BZI7 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC4.28□□□□□ -1.72
UPF3BQ9BZI7 HMGB3P14-201ENST00000494195 599 ntBASIC4.28□□□□□ -1.72
UPF3BQ9BZI7 WBP1LP4-201ENST00000505043 344 ntBASIC4.28□□□□□ -1.72
UPF3BQ9BZI7 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC4.28□□□□□ -1.72
UPF3BQ9BZI7 AC021146.1-201ENST00000511202 716 ntBASIC4.28□□□□□ -1.72
UPF3BQ9BZI7 IGHVIII-38-1-201ENST00000521454 282 ntBASIC4.28□□□□□ -1.72
UPF3BQ9BZI7 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC4.28□□□□□ -1.72
UPF3BQ9BZI7 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC4.28□□□□□ -1.72
UPF3BQ9BZI7 GTF2IP8-201ENST00000560687 584 ntBASIC4.28□□□□□ -1.72
UPF3BQ9BZI7 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC4.28□□□□□ -1.72
UPF3BQ9BZI7 AC022146.1-201ENST00000595307 847 ntBASIC4.28□□□□□ -1.72
UPF3BQ9BZI7 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC4.28□□□□□ -1.72
UPF3BQ9BZI7 AC034236.3-201ENST00000605999 461 ntBASIC4.28□□□□□ -1.72
UPF3BQ9BZI7 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
UPF3BQ9BZI7 TEX41-280ENST00000629185 591 ntTSL 5 BASIC4.28□□□□□ -1.72
UPF3BQ9BZI7 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
UPF3BQ9BZI7 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC4.28□□□□□ -1.72
UPF3BQ9BZI7 CEP170P1-201ENST00000502249 4587 ntBASIC4.28□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 122.3 ms