Protein–RNA interactions for Protein: Q9BZ76

CNTNAP3, Contactin-associated protein-like 3, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3Q9BZ76 ECT2-201ENST00000232458 4087 ntAPPRIS P2 TSL 1 (best) BASIC6.28□□□□□ -1.4
CNTNAP3Q9BZ76 GCSAML-210ENST00000536561 4063 ntAPPRIS P3 TSL 4 BASIC6.28□□□□□ -1.4
CNTNAP3Q9BZ76 BBOX1-204ENST00000528583 1724 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
CNTNAP3Q9BZ76 GABRA1-211ENST00000635880 1739 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
CNTNAP3Q9BZ76 NSD3-206ENST00000527502 4471 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
CNTNAP3Q9BZ76 AC087477.2-202ENST00000558499 4856 ntTSL 4 BASIC6.28□□□□□ -1.4
CNTNAP3Q9BZ76 MR1-209ENST00000617803 7584 ntTSL 5 BASIC6.28□□□□□ -1.4
CNTNAP3Q9BZ76 AC244502.1-201ENST00000514473 1951 ntTSL 2 BASIC6.28□□□□□ -1.4
CNTNAP3Q9BZ76 ADAMTS9-AS2-202ENST00000474768 2388 ntTSL 2 BASIC6.28□□□□□ -1.4
CNTNAP3Q9BZ76 AC004972.1-201ENST00000623934 2209 ntBASIC6.28□□□□□ -1.4
CNTNAP3Q9BZ76 AC091806.1-201ENST00000452690 3000 ntTSL 2 BASIC6.28□□□□□ -1.4
CNTNAP3Q9BZ76 HIST1H2BA-201ENST00000274764 516 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
CNTNAP3Q9BZ76 Y_RNA.478-201ENST00000384358 107 ntBASIC6.28□□□□□ -1.4
CNTNAP3Q9BZ76 RNU6-1093P-201ENST00000391194 107 ntBASIC6.28□□□□□ -1.4
CNTNAP3Q9BZ76 AL390243.1-201ENST00000422038 708 ntTSL 2 BASIC6.28□□□□□ -1.4
CNTNAP3Q9BZ76 AC008753.1-201ENST00000423096 284 ntBASIC6.28□□□□□ -1.4
CNTNAP3Q9BZ76 AL592146.1-201ENST00000433869 1126 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
CNTNAP3Q9BZ76 AC104698.1-201ENST00000435671 276 ntBASIC6.28□□□□□ -1.4
CNTNAP3Q9BZ76 AL031663.1-201ENST00000437445 219 ntBASIC6.28□□□□□ -1.4
CNTNAP3Q9BZ76 AL772161.1-201ENST00000439130 476 ntBASIC6.28□□□□□ -1.4
CNTNAP3Q9BZ76 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC6.28□□□□□ -1.4
CNTNAP3Q9BZ76 EEF1B2P6-201ENST00000445713 673 ntBASIC6.28□□□□□ -1.4
CNTNAP3Q9BZ76 RBMY2TP-201ENST00000451162 947 ntBASIC6.28□□□□□ -1.4
CNTNAP3Q9BZ76 RN7SL329P-201ENST00000467740 299 ntBASIC6.28□□□□□ -1.4
CNTNAP3Q9BZ76 RPL24-206ENST00000495401 478 ntTSL 2 BASIC6.28□□□□□ -1.4
CNTNAP3Q9BZ76 HSPD1P15-201ENST00000505573 1122 ntBASIC6.28□□□□□ -1.4
CNTNAP3Q9BZ76 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC6.28□□□□□ -1.4
CNTNAP3Q9BZ76 RNA5SP418-201ENST00000515951 117 ntBASIC6.28□□□□□ -1.4
CNTNAP3Q9BZ76 RNU6-475P-201ENST00000516073 104 ntBASIC6.28□□□□□ -1.4
CNTNAP3Q9BZ76 RNU6-410P-201ENST00000517006 107 ntBASIC6.28□□□□□ -1.4
CNTNAP3Q9BZ76 ODF1-202ENST00000518835 368 ntTSL 3 BASIC6.28□□□□□ -1.4
CNTNAP3Q9BZ76 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC6.28□□□□□ -1.4
CNTNAP3Q9BZ76 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC6.28□□□□□ -1.4
CNTNAP3Q9BZ76 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC6.28□□□□□ -1.4
CNTNAP3Q9BZ76 SETP7-201ENST00000552169 453 ntBASIC6.28□□□□□ -1.4
CNTNAP3Q9BZ76 AC007956.1-201ENST00000555623 542 ntBASIC6.28□□□□□ -1.4
CNTNAP3Q9BZ76 MIR4697-201ENST00000582977 78 ntBASIC6.28□□□□□ -1.4
CNTNAP3Q9BZ76 MIR4424-201ENST00000585257 86 ntBASIC6.28□□□□□ -1.4
CNTNAP3Q9BZ76 AC015801.1-201ENST00000585651 153 ntBASIC6.28□□□□□ -1.4
CNTNAP3Q9BZ76 GLUD1P4-201ENST00000590914 418 ntBASIC6.28□□□□□ -1.4
CNTNAP3Q9BZ76 AC009779.6-201ENST00000603972 165 ntBASIC6.28□□□□□ -1.4
CNTNAP3Q9BZ76 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC6.28□□□□□ -1.4
CNTNAP3Q9BZ76 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
CNTNAP3Q9BZ76 TGFB2-202ENST00000366930 4969 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
CNTNAP3Q9BZ76 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
CNTNAP3Q9BZ76 STIL-201ENST00000337817 5087 ntAPPRIS ALT2 TSL 5 BASIC6.28□□□□□ -1.4
CNTNAP3Q9BZ76 RIPOR2-207ENST00000540914 3614 ntTSL 2 BASIC6.28□□□□□ -1.4
CNTNAP3Q9BZ76 TLR10-204ENST00000506111 3462 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
CNTNAP3Q9BZ76 WDR48-201ENST00000302313 3707 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
CNTNAP3Q9BZ76 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
CNTNAP3Q9BZ76 MUC5B-204ENST00000529681 17911 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
CNTNAP3Q9BZ76 LRBA-201ENST00000357115 9899 ntAPPRIS P3 TSL 1 (best) BASIC6.28□□□□□ -1.4
CNTNAP3Q9BZ76 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
CNTNAP3Q9BZ76 LRMDA-208ENST00000496424 3923 ntTSL 2 BASIC6.28□□□□□ -1.4
CNTNAP3Q9BZ76 ELMO1-202ENST00000396040 1982 ntTSL 1 (best) BASIC6.27□□□□□ -1.4
CNTNAP3Q9BZ76 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC6.27□□□□□ -1.4
CNTNAP3Q9BZ76 LRMP-204ENST00000547044 2208 ntAPPRIS P2 TSL 1 (best) BASIC6.27□□□□□ -1.4
CNTNAP3Q9BZ76 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
CNTNAP3Q9BZ76 CLIP4-202ENST00000401605 2322 ntTSL 2 BASIC6.27□□□□□ -1.41
CNTNAP3Q9BZ76 MAPK10-365ENST00000641902 3825 ntBASIC6.27□□□□□ -1.41
CNTNAP3Q9BZ76 AQR-201ENST00000156471 9694 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
CNTNAP3Q9BZ76 TGFBR3-207ENST00000525962 3927 ntAPPRIS P3 TSL 1 (best) BASIC6.27□□□□□ -1.41
CNTNAP3Q9BZ76 IL23R-201ENST00000347310 2912 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
CNTNAP3Q9BZ76 NFIB-221ENST00000637742 2166 ntTSL 5 BASIC6.27□□□□□ -1.41
CNTNAP3Q9BZ76 AL049555.1-201ENST00000562834 1933 ntBASIC6.27□□□□□ -1.41
CNTNAP3Q9BZ76 DCAF13-210ENST00000618975 2038 ntTSL 2 BASIC6.27□□□□□ -1.41
CNTNAP3Q9BZ76 Y_RNA.222-201ENST00000364264 102 ntBASIC6.27□□□□□ -1.41
CNTNAP3Q9BZ76 RNA5SP132-201ENST00000364725 118 ntBASIC6.27□□□□□ -1.41
CNTNAP3Q9BZ76 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC6.27□□□□□ -1.41
CNTNAP3Q9BZ76 CASP10-206ENST00000374650 1126 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
CNTNAP3Q9BZ76 PPIAP26-201ENST00000377951 522 ntBASIC6.27□□□□□ -1.41
CNTNAP3Q9BZ76 AL359694.1-201ENST00000403247 604 ntBASIC6.27□□□□□ -1.41
CNTNAP3Q9BZ76 PPIAP9-201ENST00000403866 498 ntBASIC6.27□□□□□ -1.41
CNTNAP3Q9BZ76 ACTR3BP6-201ENST00000422332 1241 ntBASIC6.27□□□□□ -1.41
CNTNAP3Q9BZ76 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
CNTNAP3Q9BZ76 GAPDHP57-201ENST00000424400 585 ntBASIC6.27□□□□□ -1.41
CNTNAP3Q9BZ76 EIF1P2-201ENST00000428233 350 ntBASIC6.27□□□□□ -1.41
CNTNAP3Q9BZ76 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC6.27□□□□□ -1.41
CNTNAP3Q9BZ76 AL731534.1-201ENST00000434711 269 ntBASIC6.27□□□□□ -1.41
CNTNAP3Q9BZ76 RPS3AP54-201ENST00000435535 734 ntBASIC6.27□□□□□ -1.41
CNTNAP3Q9BZ76 RPS3AP38-201ENST00000435889 763 ntBASIC6.27□□□□□ -1.41
CNTNAP3Q9BZ76 RPL12P3-201ENST00000440080 396 ntBASIC6.27□□□□□ -1.41
CNTNAP3Q9BZ76 LAMTOR5-AS1-201ENST00000444238 881 ntTSL 5 BASIC6.27□□□□□ -1.41
CNTNAP3Q9BZ76 AC073909.1-201ENST00000447112 999 ntBASIC6.27□□□□□ -1.41
CNTNAP3Q9BZ76 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC6.27□□□□□ -1.41
CNTNAP3Q9BZ76 PSPC1P2-201ENST00000455130 225 ntBASIC6.27□□□□□ -1.41
CNTNAP3Q9BZ76 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC6.27□□□□□ -1.41
CNTNAP3Q9BZ76 LINC02025-201ENST00000488348 360 ntTSL 3 BASIC6.27□□□□□ -1.41
CNTNAP3Q9BZ76 PRMT5P1-201ENST00000514351 598 ntBASIC6.27□□□□□ -1.41
CNTNAP3Q9BZ76 AC093599.1-201ENST00000515232 562 ntTSL 4 BASIC6.27□□□□□ -1.41
CNTNAP3Q9BZ76 SCARNA24.1-201ENST00000516465 137 ntBASIC6.27□□□□□ -1.41
CNTNAP3Q9BZ76 RN7SKP98-201ENST00000517070 156 ntBASIC6.27□□□□□ -1.41
CNTNAP3Q9BZ76 RN7SKP92-201ENST00000517266 244 ntBASIC6.27□□□□□ -1.41
CNTNAP3Q9BZ76 OR5D17P-201ENST00000531492 978 ntBASIC6.27□□□□□ -1.41
CNTNAP3Q9BZ76 ASCL3-201ENST00000531618 633 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
CNTNAP3Q9BZ76 MYL6-213ENST00000549017 502 ntTSL 3 BASIC6.27□□□□□ -1.41
CNTNAP3Q9BZ76 AL118558.2-201ENST00000556294 238 ntBASIC6.27□□□□□ -1.41
CNTNAP3Q9BZ76 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC6.27□□□□□ -1.41
CNTNAP3Q9BZ76 MIR3672-201ENST00000584290 82 ntBASIC6.27□□□□□ -1.41
CNTNAP3Q9BZ76 AC006557.5-201ENST00000603126 811 ntBASIC6.27□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 103.9 ms