Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC3.36□□□□□ -1.87
RSPO3Q9BXY4 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC3.36□□□□□ -1.87
RSPO3Q9BXY4 LMO7DN-IT1-201ENST00000436872 321 ntTSL 3 BASIC3.36□□□□□ -1.87
RSPO3Q9BXY4 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC3.36□□□□□ -1.87
RSPO3Q9BXY4 RPS20P21-201ENST00000466859 343 ntBASIC3.36□□□□□ -1.87
RSPO3Q9BXY4 VN1R105P-201ENST00000486595 910 ntBASIC3.36□□□□□ -1.87
RSPO3Q9BXY4 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC3.36□□□□□ -1.87
RSPO3Q9BXY4 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC3.36□□□□□ -1.87
RSPO3Q9BXY4 AC010425.1-201ENST00000511734 554 ntTSL 4 BASIC3.36□□□□□ -1.87
RSPO3Q9BXY4 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC3.36□□□□□ -1.87
RSPO3Q9BXY4 GPX8-208ENST00000515370 1036 ntTSL 2 BASIC3.36□□□□□ -1.87
RSPO3Q9BXY4 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC3.36□□□□□ -1.87
RSPO3Q9BXY4 MTERF3-205ENST00000524341 776 ntTSL 3 BASIC3.36□□□□□ -1.87
RSPO3Q9BXY4 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.36□□□□□ -1.87
RSPO3Q9BXY4 AC091515.1-201ENST00000548110 679 ntBASIC3.36□□□□□ -1.87
RSPO3Q9BXY4 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC3.36□□□□□ -1.87
RSPO3Q9BXY4 TRAV15-201ENST00000556680 249 ntBASIC3.36□□□□□ -1.87
RSPO3Q9BXY4 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
RSPO3Q9BXY4 AC145207.6-201ENST00000579981 782 ntTSL 5 BASIC3.36□□□□□ -1.87
RSPO3Q9BXY4 PSMA6P4-201ENST00000603247 718 ntBASIC3.36□□□□□ -1.87
RSPO3Q9BXY4 AL136370.1-201ENST00000608166 691 ntBASIC3.36□□□□□ -1.87
RSPO3Q9BXY4 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC3.36□□□□□ -1.87
RSPO3Q9BXY4 AC090912.3-201ENST00000609775 533 ntBASIC3.36□□□□□ -1.87
RSPO3Q9BXY4 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC3.36□□□□□ -1.87
RSPO3Q9BXY4 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC3.36□□□□□ -1.87
RSPO3Q9BXY4 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
RSPO3Q9BXY4 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.36□□□□□ -1.87
RSPO3Q9BXY4 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
RSPO3Q9BXY4 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
RSPO3Q9BXY4 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
RSPO3Q9BXY4 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC3.36□□□□□ -1.87
RSPO3Q9BXY4 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.36□□□□□ -1.87
RSPO3Q9BXY4 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC3.36□□□□□ -1.87
RSPO3Q9BXY4 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.36□□□□□ -1.87
RSPO3Q9BXY4 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
RSPO3Q9BXY4 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
RSPO3Q9BXY4 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC3.35□□□□□ -1.87
RSPO3Q9BXY4 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC3.35□□□□□ -1.87
RSPO3Q9BXY4 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC3.35□□□□□ -1.87
RSPO3Q9BXY4 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
RSPO3Q9BXY4 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.35□□□□□ -1.87
RSPO3Q9BXY4 U3.15-201ENST00000365398 212 ntBASIC3.35□□□□□ -1.87
RSPO3Q9BXY4 RNU6-225P-201ENST00000384613 103 ntBASIC3.35□□□□□ -1.87
RSPO3Q9BXY4 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
RSPO3Q9BXY4 PVALB-202ENST00000404171 422 ntTSL 2 BASIC3.35□□□□□ -1.87
RSPO3Q9BXY4 AL138878.1-201ENST00000405131 347 ntBASIC3.35□□□□□ -1.87
RSPO3Q9BXY4 ZNF602P-201ENST00000405929 924 ntBASIC3.35□□□□□ -1.87
RSPO3Q9BXY4 CYCSP19-201ENST00000411715 316 ntBASIC3.35□□□□□ -1.87
RSPO3Q9BXY4 MTND4P22-201ENST00000413116 1169 ntBASIC3.35□□□□□ -1.87
RSPO3Q9BXY4 DBIP2-201ENST00000419076 262 ntBASIC3.35□□□□□ -1.87
RSPO3Q9BXY4 MTATP6P11-201ENST00000428071 670 ntBASIC3.35□□□□□ -1.87
RSPO3Q9BXY4 AL513323.1-201ENST00000431862 1063 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
RSPO3Q9BXY4 AL353093.1-201ENST00000441292 436 ntBASIC3.35□□□□□ -1.87
RSPO3Q9BXY4 HMGN1P8-201ENST00000463578 288 ntBASIC3.35□□□□□ -1.87
RSPO3Q9BXY4 RPL23AP12-201ENST00000467573 473 ntBASIC3.35□□□□□ -1.87
RSPO3Q9BXY4 AC006511.1-201ENST00000470614 315 ntBASIC3.35□□□□□ -1.87
RSPO3Q9BXY4 NIPA2P2-201ENST00000496376 1083 ntBASIC3.35□□□□□ -1.87
RSPO3Q9BXY4 AC010627.1-201ENST00000503819 1294 ntBASIC3.35□□□□□ -1.87
RSPO3Q9BXY4 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC3.35□□□□□ -1.87
RSPO3Q9BXY4 NDUFB4P9-201ENST00000511646 388 ntBASIC3.35□□□□□ -1.87
RSPO3Q9BXY4 USP9YP5-201ENST00000511770 630 ntBASIC3.35□□□□□ -1.87
RSPO3Q9BXY4 NPM1P41-201ENST00000512920 831 ntBASIC3.35□□□□□ -1.87
RSPO3Q9BXY4 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC3.35□□□□□ -1.87
RSPO3Q9BXY4 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC3.35□□□□□ -1.87
RSPO3Q9BXY4 OR4C2P-201ENST00000530855 1064 ntBASIC3.35□□□□□ -1.87
RSPO3Q9BXY4 AL731537.2-201ENST00000561565 951 ntBASIC3.35□□□□□ -1.87
RSPO3Q9BXY4 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC3.35□□□□□ -1.87
RSPO3Q9BXY4 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC3.35□□□□□ -1.87
RSPO3Q9BXY4 AC005255.1-201ENST00000593748 216 ntBASIC3.35□□□□□ -1.87
RSPO3Q9BXY4 LINC00632-204ENST00000602830 597 ntTSL 4 BASIC3.35□□□□□ -1.87
RSPO3Q9BXY4 AC024220.1-201ENST00000603675 484 ntBASIC3.35□□□□□ -1.87
RSPO3Q9BXY4 AL049634.3-201ENST00000604968 457 ntBASIC3.35□□□□□ -1.87
RSPO3Q9BXY4 AC015802.5-201ENST00000607478 399 ntBASIC3.35□□□□□ -1.87
RSPO3Q9BXY4 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.35□□□□□ -1.87
RSPO3Q9BXY4 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
RSPO3Q9BXY4 HPVC1-201ENST00000629899 1198 ntBASIC3.35□□□□□ -1.87
RSPO3Q9BXY4 AC119674.1-207ENST00000641355 633 ntBASIC3.35□□□□□ -1.87
RSPO3Q9BXY4 AL163152.1-201ENST00000642001 374 ntBASIC3.35□□□□□ -1.87
RSPO3Q9BXY4 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
RSPO3Q9BXY4 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.35□□□□□ -1.87
RSPO3Q9BXY4 OFD1P5Y-201ENST00000447585 2590 ntBASIC3.35□□□□□ -1.87
RSPO3Q9BXY4 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.35□□□□□ -1.87
RSPO3Q9BXY4 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC3.34□□□□□ -1.87
RSPO3Q9BXY4 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC3.34□□□□□ -1.87
RSPO3Q9BXY4 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC3.34□□□□□ -1.87
RSPO3Q9BXY4 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
RSPO3Q9BXY4 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC3.34□□□□□ -1.87
RSPO3Q9BXY4 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
RSPO3Q9BXY4 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
RSPO3Q9BXY4 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
RSPO3Q9BXY4 RPL7P2-201ENST00000427639 268 ntBASIC3.34□□□□□ -1.87
RSPO3Q9BXY4 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC3.34□□□□□ -1.87
RSPO3Q9BXY4 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC3.34□□□□□ -1.87
RSPO3Q9BXY4 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC3.34□□□□□ -1.87
RSPO3Q9BXY4 AC005229.2-201ENST00000456995 399 ntBASIC3.34□□□□□ -1.87
RSPO3Q9BXY4 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC3.34□□□□□ -1.87
RSPO3Q9BXY4 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC3.34□□□□□ -1.87
RSPO3Q9BXY4 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC3.34□□□□□ -1.87
RSPO3Q9BXY4 RPL23AP73-201ENST00000492507 471 ntBASIC3.34□□□□□ -1.87
RSPO3Q9BXY4 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC3.34□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 84.6 ms