Protein–RNA interactions for Protein: Q9BXA9

SALL3, Sal-like protein 3, humanhuman

Predictions only

Length 1,300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SALL3Q9BXA9 AP002360.4-201ENST00000606980 481 ntBASIC5.26□□□□□ -1.57
SALL3Q9BXA9 AC092354.2-201ENST00000607786 514 ntBASIC5.26□□□□□ -1.57
SALL3Q9BXA9 AC092653.1-201ENST00000608509 531 ntBASIC5.26□□□□□ -1.57
SALL3Q9BXA9 AC064801.1-201ENST00000612025 407 ntBASIC5.26□□□□□ -1.57
SALL3Q9BXA9 AL355073.2-201ENST00000612106 557 ntBASIC5.26□□□□□ -1.57
SALL3Q9BXA9 AC092794.1-201ENST00000612734 582 ntBASIC5.26□□□□□ -1.57
SALL3Q9BXA9 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC5.26□□□□□ -1.57
SALL3Q9BXA9 AL157770.1-201ENST00000623049 439 ntBASIC5.26□□□□□ -1.57
SALL3Q9BXA9 AC093648.1-201ENST00000623546 606 ntBASIC5.26□□□□□ -1.57
SALL3Q9BXA9 AC092656.1-203ENST00000624134 423 ntBASIC5.26□□□□□ -1.57
SALL3Q9BXA9 AL603839.4-201ENST00000624658 1005 ntBASIC5.26□□□□□ -1.57
SALL3Q9BXA9 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC5.26□□□□□ -1.57
SALL3Q9BXA9 MAPK10-349ENST00000641767 3661 ntBASIC5.26□□□□□ -1.57
SALL3Q9BXA9 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
SALL3Q9BXA9 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC5.26□□□□□ -1.57
SALL3Q9BXA9 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
SALL3Q9BXA9 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
SALL3Q9BXA9 MTND5P24-201ENST00000438892 1767 ntBASIC5.26□□□□□ -1.57
SALL3Q9BXA9 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC5.26□□□□□ -1.57
SALL3Q9BXA9 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
SALL3Q9BXA9 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC5.26□□□□□ -1.57
SALL3Q9BXA9 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC5.26□□□□□ -1.57
SALL3Q9BXA9 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
SALL3Q9BXA9 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC5.26□□□□□ -1.57
SALL3Q9BXA9 HSPA8P17-201ENST00000427029 1382 ntBASIC5.26□□□□□ -1.57
SALL3Q9BXA9 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC5.26□□□□□ -1.57
SALL3Q9BXA9 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
SALL3Q9BXA9 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC5.25□□□□□ -1.57
SALL3Q9BXA9 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC5.25□□□□□ -1.57
SALL3Q9BXA9 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
SALL3Q9BXA9 RNU1-108P-201ENST00000362556 161 ntBASIC5.25□□□□□ -1.57
SALL3Q9BXA9 RNA5SP28-201ENST00000363841 119 ntBASIC5.25□□□□□ -1.57
SALL3Q9BXA9 RNU4-75P-201ENST00000364621 146 ntBASIC5.25□□□□□ -1.57
SALL3Q9BXA9 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
SALL3Q9BXA9 AL136131.1-201ENST00000406079 803 ntBASIC5.25□□□□□ -1.57
SALL3Q9BXA9 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC5.25□□□□□ -1.57
SALL3Q9BXA9 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC5.25□□□□□ -1.57
SALL3Q9BXA9 ELOCP17-201ENST00000414751 326 ntBASIC5.25□□□□□ -1.57
SALL3Q9BXA9 AC023128.2-201ENST00000420880 1223 ntBASIC5.25□□□□□ -1.57
SALL3Q9BXA9 AC246680.2-201ENST00000422106 389 ntBASIC5.25□□□□□ -1.57
SALL3Q9BXA9 MTND4LP11-201ENST00000422184 280 ntBASIC5.25□□□□□ -1.57
SALL3Q9BXA9 AL592293.2-201ENST00000422292 996 ntBASIC5.25□□□□□ -1.57
SALL3Q9BXA9 AC093084.1-201ENST00000424233 687 ntBASIC5.25□□□□□ -1.57
SALL3Q9BXA9 C1DP1-201ENST00000426049 402 ntBASIC5.25□□□□□ -1.57
SALL3Q9BXA9 AC073335.1-201ENST00000427776 363 ntBASIC5.25□□□□□ -1.57
SALL3Q9BXA9 AC244035.1-201ENST00000430042 390 ntBASIC5.25□□□□□ -1.57
SALL3Q9BXA9 RPS29P17-201ENST00000430795 166 ntBASIC5.25□□□□□ -1.57
SALL3Q9BXA9 ARL6IP1P2-201ENST00000431356 563 ntBASIC5.25□□□□□ -1.57
SALL3Q9BXA9 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC5.25□□□□□ -1.57
SALL3Q9BXA9 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC5.25□□□□□ -1.57
SALL3Q9BXA9 CBX1P1-201ENST00000440184 427 ntBASIC5.25□□□□□ -1.57
SALL3Q9BXA9 AL353898.1-201ENST00000444055 238 ntBASIC5.25□□□□□ -1.57
SALL3Q9BXA9 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC5.25□□□□□ -1.57
SALL3Q9BXA9 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC5.25□□□□□ -1.57
SALL3Q9BXA9 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC5.25□□□□□ -1.57
SALL3Q9BXA9 AC041039.1-201ENST00000485656 536 ntBASIC5.25□□□□□ -1.57
SALL3Q9BXA9 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC5.25□□□□□ -1.57
SALL3Q9BXA9 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC5.25□□□□□ -1.57
SALL3Q9BXA9 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC5.25□□□□□ -1.57
SALL3Q9BXA9 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC5.25□□□□□ -1.57
SALL3Q9BXA9 RNA5SP73-201ENST00000516744 108 ntBASIC5.25□□□□□ -1.57
SALL3Q9BXA9 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC5.25□□□□□ -1.57
SALL3Q9BXA9 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC5.25□□□□□ -1.57
SALL3Q9BXA9 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC5.25□□□□□ -1.57
SALL3Q9BXA9 AGGF1P8-201ENST00000562979 1000 ntBASIC5.25□□□□□ -1.57
SALL3Q9BXA9 RN7SL176P-201ENST00000580352 264 ntBASIC5.25□□□□□ -1.57
SALL3Q9BXA9 VN1R83P-201ENST00000595685 445 ntBASIC5.25□□□□□ -1.57
SALL3Q9BXA9 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC5.25□□□□□ -1.57
SALL3Q9BXA9 MTCO2P22-201ENST00000603246 681 ntBASIC5.25□□□□□ -1.57
SALL3Q9BXA9 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC5.25□□□□□ -1.57
SALL3Q9BXA9 OR2BH1P-201ENST00000608850 864 ntBASIC5.25□□□□□ -1.57
SALL3Q9BXA9 AC018755.4-201ENST00000619715 454 ntBASIC5.25□□□□□ -1.57
SALL3Q9BXA9 AL590240.3-201ENST00000621416 943 ntBASIC5.25□□□□□ -1.57
SALL3Q9BXA9 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC5.25□□□□□ -1.57
SALL3Q9BXA9 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC5.25□□□□□ -1.57
SALL3Q9BXA9 AC025031.4-201ENST00000621248 3271 ntBASIC5.25□□□□□ -1.57
SALL3Q9BXA9 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
SALL3Q9BXA9 AC005832.2-201ENST00000538921 1430 ntBASIC5.25□□□□□ -1.57
SALL3Q9BXA9 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
SALL3Q9BXA9 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC5.25□□□□□ -1.57
SALL3Q9BXA9 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC5.25□□□□□ -1.57
SALL3Q9BXA9 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC5.25□□□□□ -1.57
SALL3Q9BXA9 AC017007.4-201ENST00000503353 1352 ntBASIC5.25□□□□□ -1.57
SALL3Q9BXA9 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
SALL3Q9BXA9 CCT8P1-201ENST00000413611 1657 ntBASIC5.24□□□□□ -1.57
SALL3Q9BXA9 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
SALL3Q9BXA9 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC5.24□□□□□ -1.57
SALL3Q9BXA9 SNORD65C-201ENST00000390962 71 ntBASIC5.24□□□□□ -1.57
SALL3Q9BXA9 VDAC2P1-201ENST00000399358 958 ntBASIC5.24□□□□□ -1.57
SALL3Q9BXA9 RN7SKP235-201ENST00000410662 305 ntBASIC5.24□□□□□ -1.57
SALL3Q9BXA9 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC5.24□□□□□ -1.57
SALL3Q9BXA9 RPL12P34-201ENST00000424532 479 ntBASIC5.24□□□□□ -1.57
SALL3Q9BXA9 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC5.24□□□□□ -1.57
SALL3Q9BXA9 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC5.24□□□□□ -1.57
SALL3Q9BXA9 HLA-N-201ENST00000437516 135 ntBASIC5.24□□□□□ -1.57
SALL3Q9BXA9 PHBP16-201ENST00000446318 950 ntBASIC5.24□□□□□ -1.57
SALL3Q9BXA9 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC5.24□□□□□ -1.57
SALL3Q9BXA9 EEF1A1P1-201ENST00000447052 739 ntBASIC5.24□□□□□ -1.57
SALL3Q9BXA9 AL109741.2-201ENST00000455561 343 ntBASIC5.24□□□□□ -1.57
SALL3Q9BXA9 RPS26P28-201ENST00000470806 348 ntBASIC5.24□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 119.7 ms