Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 PGAM1P13-201ENST00000507497 754 ntBASIC4.61□□□□□ -1.67
SNX18Q96RF0 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
SNX18Q96RF0 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC4.61□□□□□ -1.67
SNX18Q96RF0 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC4.61□□□□□ -1.67
SNX18Q96RF0 RNU6-202P-201ENST00000515998 96 ntBASIC4.61□□□□□ -1.67
SNX18Q96RF0 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC4.61□□□□□ -1.67
SNX18Q96RF0 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC4.61□□□□□ -1.67
SNX18Q96RF0 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC4.61□□□□□ -1.67
SNX18Q96RF0 GTF2IP22-201ENST00000554443 182 ntBASIC4.61□□□□□ -1.67
SNX18Q96RF0 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC4.61□□□□□ -1.67
SNX18Q96RF0 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC4.61□□□□□ -1.67
SNX18Q96RF0 HYKK-203ENST00000563233 734 ntTSL 2 BASIC4.61□□□□□ -1.67
SNX18Q96RF0 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC4.61□□□□□ -1.67
SNX18Q96RF0 PSMA6P4-201ENST00000603247 718 ntBASIC4.61□□□□□ -1.67
SNX18Q96RF0 AC116165.2-201ENST00000616705 206 ntBASIC4.61□□□□□ -1.67
SNX18Q96RF0 AC090527.3-201ENST00000619041 548 ntBASIC4.61□□□□□ -1.67
SNX18Q96RF0 AC092650.2-201ENST00000619984 902 ntBASIC4.61□□□□□ -1.67
SNX18Q96RF0 CU634019.2-201ENST00000625184 593 ntTSL 3 BASIC4.61□□□□□ -1.67
SNX18Q96RF0 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC4.61□□□□□ -1.67
SNX18Q96RF0 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC4.6□□□□□ -1.67
SNX18Q96RF0 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC4.6□□□□□ -1.67
SNX18Q96RF0 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC4.6□□□□□ -1.67
SNX18Q96RF0 RNA5SP183-201ENST00000362452 119 ntBASIC4.6□□□□□ -1.67
SNX18Q96RF0 RN7SKP224-201ENST00000364140 325 ntBASIC4.6□□□□□ -1.67
SNX18Q96RF0 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC4.6□□□□□ -1.67
SNX18Q96RF0 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC4.6□□□□□ -1.67
SNX18Q96RF0 RNY3P10-201ENST00000384764 102 ntBASIC4.6□□□□□ -1.67
SNX18Q96RF0 AL035079.1-201ENST00000405210 287 ntBASIC4.6□□□□□ -1.67
SNX18Q96RF0 MIR1182-201ENST00000408363 97 ntBASIC4.6□□□□□ -1.67
SNX18Q96RF0 AL160275.2-201ENST00000412010 394 ntBASIC4.6□□□□□ -1.67
SNX18Q96RF0 AC007899.1-201ENST00000412776 775 ntBASIC4.6□□□□□ -1.67
SNX18Q96RF0 AC009237.10-201ENST00000414112 510 ntBASIC4.6□□□□□ -1.67
SNX18Q96RF0 AC062016.2-201ENST00000420950 676 ntBASIC4.6□□□□□ -1.67
SNX18Q96RF0 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC4.6□□□□□ -1.67
SNX18Q96RF0 OFD1P12Y-201ENST00000427963 1207 ntBASIC4.6□□□□□ -1.67
SNX18Q96RF0 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC4.6□□□□□ -1.67
SNX18Q96RF0 OFD1P13Y-201ENST00000431179 1232 ntBASIC4.6□□□□□ -1.67
SNX18Q96RF0 RPS27P18-201ENST00000431701 247 ntBASIC4.6□□□□□ -1.67
SNX18Q96RF0 HMGB3P9-201ENST00000441799 583 ntBASIC4.6□□□□□ -1.67
SNX18Q96RF0 AC099654.1-201ENST00000442649 407 ntTSL 3 BASIC4.6□□□□□ -1.67
SNX18Q96RF0 AC004980.3-201ENST00000447046 365 ntBASIC4.6□□□□□ -1.67
SNX18Q96RF0 EPS15P1-201ENST00000448836 336 ntBASIC4.6□□□□□ -1.67
SNX18Q96RF0 CLEC2A-202ENST00000455827 916 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
SNX18Q96RF0 AC005008.1-201ENST00000456151 612 ntBASIC4.6□□□□□ -1.67
SNX18Q96RF0 Z92846.1-201ENST00000456203 268 ntBASIC4.6□□□□□ -1.67
SNX18Q96RF0 SUMO2P2-201ENST00000456482 255 ntBASIC4.6□□□□□ -1.67
SNX18Q96RF0 RPL21P71-201ENST00000465598 459 ntBASIC4.6□□□□□ -1.67
SNX18Q96RF0 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC4.6□□□□□ -1.67
SNX18Q96RF0 RPS21P4-201ENST00000487122 248 ntBASIC4.6□□□□□ -1.67
SNX18Q96RF0 RPS4XP20-201ENST00000505751 772 ntBASIC4.6□□□□□ -1.67
SNX18Q96RF0 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC4.6□□□□□ -1.67
SNX18Q96RF0 HMGB1P28-201ENST00000507778 552 ntBASIC4.6□□□□□ -1.67
SNX18Q96RF0 GTF2F2P1-201ENST00000511083 675 ntBASIC4.6□□□□□ -1.67
SNX18Q96RF0 AC109830.1-202ENST00000515491 860 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
SNX18Q96RF0 RNU6-941P-201ENST00000516346 108 ntBASIC4.6□□□□□ -1.67
SNX18Q96RF0 AC027309.2-201ENST00000520566 192 ntBASIC4.6□□□□□ -1.67
SNX18Q96RF0 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC4.6□□□□□ -1.67
SNX18Q96RF0 RPL23AP53-201ENST00000521854 457 ntBASIC4.6□□□□□ -1.67
SNX18Q96RF0 SLC2A13P1-201ENST00000531560 322 ntBASIC4.6□□□□□ -1.67
SNX18Q96RF0 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC4.6□□□□□ -1.67
SNX18Q96RF0 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC4.6□□□□□ -1.67
SNX18Q96RF0 OR6C7P-201ENST00000547875 934 ntBASIC4.6□□□□□ -1.67
SNX18Q96RF0 PSMB7P1-201ENST00000556349 514 ntBASIC4.6□□□□□ -1.67
SNX18Q96RF0 NDUFB4P11-201ENST00000560510 395 ntBASIC4.6□□□□□ -1.67
SNX18Q96RF0 EIF1P4-201ENST00000572664 335 ntBASIC4.6□□□□□ -1.67
SNX18Q96RF0 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC4.6□□□□□ -1.67
SNX18Q96RF0 AC017100.2-201ENST00000584628 355 ntBASIC4.6□□□□□ -1.67
SNX18Q96RF0 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC4.6□□□□□ -1.67
SNX18Q96RF0 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC4.6□□□□□ -1.67
SNX18Q96RF0 AC008687.2-201ENST00000597865 520 ntBASIC4.6□□□□□ -1.67
SNX18Q96RF0 AC068276.1-201ENST00000605793 379 ntBASIC4.6□□□□□ -1.67
SNX18Q96RF0 AC012360.2-201ENST00000609349 391 ntBASIC4.6□□□□□ -1.67
SNX18Q96RF0 AC108747.1-201ENST00000609508 535 ntBASIC4.6□□□□□ -1.67
SNX18Q96RF0 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC4.6□□□□□ -1.67
SNX18Q96RF0 AC126915.2-201ENST00000610957 190 ntBASIC4.6□□□□□ -1.67
SNX18Q96RF0 MIR7155-201ENST00000615925 56 ntBASIC4.6□□□□□ -1.67
SNX18Q96RF0 WWOX-217ENST00000620008 450 ntTSL 2 BASIC4.6□□□□□ -1.67
SNX18Q96RF0 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC4.6□□□□□ -1.67
SNX18Q96RF0 AC025048.6-202ENST00000627667 438 ntBASIC4.6□□□□□ -1.67
SNX18Q96RF0 AC006927.3-201ENST00000638789 384 ntBASIC4.6□□□□□ -1.67
SNX18Q96RF0 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC4.6□□□□□ -1.67
SNX18Q96RF0 AC091046.3-201ENST00000631455 1574 ntBASIC4.6□□□□□ -1.67
SNX18Q96RF0 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
SNX18Q96RF0 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
SNX18Q96RF0 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC4.6□□□□□ -1.67
SNX18Q96RF0 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
SNX18Q96RF0 GHR-202ENST00000357703 4316 ntTSL 5 BASIC4.6□□□□□ -1.67
SNX18Q96RF0 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
SNX18Q96RF0 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC4.59□□□□□ -1.67
SNX18Q96RF0 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
SNX18Q96RF0 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
SNX18Q96RF0 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC4.59□□□□□ -1.67
SNX18Q96RF0 RPL23P2-201ENST00000320371 421 ntBASIC4.59□□□□□ -1.67
SNX18Q96RF0 RPL21P132-201ENST00000331267 462 ntBASIC4.59□□□□□ -1.67
SNX18Q96RF0 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
SNX18Q96RF0 RN7SKP113-201ENST00000363891 295 ntBASIC4.59□□□□□ -1.67
SNX18Q96RF0 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.67
SNX18Q96RF0 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC4.59□□□□□ -1.67
SNX18Q96RF0 SNORA67-201ENST00000384423 137 ntBASIC4.59□□□□□ -1.67
SNX18Q96RF0 RPL23AP29-201ENST00000397284 453 ntBASIC4.59□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 85 ms