Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 FO393419.3-201ENST00000428741 282 ntBASIC7.02□□□□□ -1.29
TRIM47Q96LD4 AC002504.1-201ENST00000438281 691 ntBASIC7.02□□□□□ -1.29
TRIM47Q96LD4 OSBPL10-AS1-205ENST00000444503 526 ntTSL 4 BASIC7.02□□□□□ -1.29
TRIM47Q96LD4 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC7.02□□□□□ -1.29
TRIM47Q96LD4 OR13K1P-201ENST00000444577 975 ntBASIC7.02□□□□□ -1.29
TRIM47Q96LD4 MIR2053-201ENST00000459295 91 ntBASIC7.02□□□□□ -1.29
TRIM47Q96LD4 MED28P2-201ENST00000475771 317 ntBASIC7.02□□□□□ -1.29
TRIM47Q96LD4 SNORA70.20-201ENST00000516848 126 ntBASIC7.02□□□□□ -1.29
TRIM47Q96LD4 AC087854.1-201ENST00000519706 414 ntBASIC7.02□□□□□ -1.29
TRIM47Q96LD4 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC7.02□□□□□ -1.29
TRIM47Q96LD4 SUB1P1-201ENST00000524415 382 ntBASIC7.02□□□□□ -1.29
TRIM47Q96LD4 GTF2IP11-201ENST00000526931 420 ntBASIC7.02□□□□□ -1.29
TRIM47Q96LD4 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
TRIM47Q96LD4 AP002812.4-201ENST00000532139 286 ntBASIC7.02□□□□□ -1.29
TRIM47Q96LD4 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC7.02□□□□□ -1.29
TRIM47Q96LD4 AL390726.5-202ENST00000564800 256 ntBASIC7.02□□□□□ -1.29
TRIM47Q96LD4 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC7.02□□□□□ -1.29
TRIM47Q96LD4 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC7.02□□□□□ -1.29
TRIM47Q96LD4 AL136131.3-201ENST00000607600 188 ntBASIC7.02□□□□□ -1.29
TRIM47Q96LD4 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC7.02□□□□□ -1.29
TRIM47Q96LD4 AC005618.4-201ENST00000625053 554 ntBASIC7.02□□□□□ -1.29
TRIM47Q96LD4 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC7.02□□□□□ -1.29
TRIM47Q96LD4 LEPR-205ENST00000371060 5135 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
TRIM47Q96LD4 ZNF19-206ENST00000565100 2087 ntTSL 5 BASIC7.02□□□□□ -1.29
TRIM47Q96LD4 GIGYF2-246ENST00000629305 7878 ntTSL 5 BASIC7.02□□□□□ -1.29
TRIM47Q96LD4 GCSAML-202ENST00000366489 4030 ntAPPRIS ALT2 TSL 2 BASIC7.02□□□□□ -1.29
TRIM47Q96LD4 ZNF540-201ENST00000316433 3099 ntAPPRIS P3 TSL 1 (best) BASIC7.02□□□□□ -1.29
TRIM47Q96LD4 RIPK1-202ENST00000380409 3864 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
TRIM47Q96LD4 AC235565.1-201ENST00000456962 1325 ntBASIC7.01□□□□□ -1.29
TRIM47Q96LD4 CFAP61-201ENST00000245957 4082 ntAPPRIS P2 TSL 1 (best) BASIC7.01□□□□□ -1.29
TRIM47Q96LD4 FGF13-201ENST00000305414 1939 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
TRIM47Q96LD4 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
TRIM47Q96LD4 AL049641.1-201ENST00000441055 1948 ntBASIC7.01□□□□□ -1.29
TRIM47Q96LD4 SLC16A4-201ENST00000369779 2632 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
TRIM47Q96LD4 OSBPL9-206ENST00000453295 2842 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
TRIM47Q96LD4 AL662795.2-201ENST00000624252 3706 ntBASIC7.01□□□□□ -1.29
TRIM47Q96LD4 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC7.01□□□□□ -1.29
TRIM47Q96LD4 GPR65-201ENST00000267549 4522 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
TRIM47Q96LD4 VPS35-201ENST00000299138 6790 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
TRIM47Q96LD4 ECT2L-205ENST00000541398 4483 ntAPPRIS P1 TSL 5 BASIC7.01□□□□□ -1.29
TRIM47Q96LD4 CDKL5-205ENST00000623535 12533 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
TRIM47Q96LD4 IGIP-201ENST00000333305 3458 ntAPPRIS P1 BASIC7.01□□□□□ -1.29
TRIM47Q96LD4 METTL9-211ENST00000615720 2890 ntTSL 2 BASIC7.01□□□□□ -1.29
TRIM47Q96LD4 ASAH1-232ENST00000636691 2472 ntTSL 5 BASIC7.01□□□□□ -1.29
TRIM47Q96LD4 GUCY1B2-204ENST00000531898 1979 ntBASIC7.01□□□□□ -1.29
TRIM47Q96LD4 ASTN2-AS1-201ENST00000418250 1756 ntTSL 2 BASIC7.01□□□□□ -1.29
TRIM47Q96LD4 OR11H13P-201ENST00000359695 979 ntBASIC7.01□□□□□ -1.29
TRIM47Q96LD4 Y_RNA.339-201ENST00000365325 102 ntBASIC7.01□□□□□ -1.29
TRIM47Q96LD4 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
TRIM47Q96LD4 Y_RNA.396-201ENST00000383949 103 ntBASIC7.01□□□□□ -1.29
TRIM47Q96LD4 RNU6-456P-201ENST00000384493 107 ntBASIC7.01□□□□□ -1.29
TRIM47Q96LD4 Y_RNA.512-201ENST00000384518 102 ntBASIC7.01□□□□□ -1.29
TRIM47Q96LD4 RPS21P8-201ENST00000413365 247 ntBASIC7.01□□□□□ -1.29
TRIM47Q96LD4 GAS5-202ENST00000414075 413 ntTSL 2 BASIC7.01□□□□□ -1.29
TRIM47Q96LD4 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC7.01□□□□□ -1.29
TRIM47Q96LD4 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC7.01□□□□□ -1.29
TRIM47Q96LD4 TMEM246-AS1-202ENST00000425734 466 ntTSL 2 BASIC7.01□□□□□ -1.29
TRIM47Q96LD4 AC092013.1-201ENST00000438795 332 ntBASIC7.01□□□□□ -1.29
TRIM47Q96LD4 PTMAP6-201ENST00000439110 327 ntBASIC7.01□□□□□ -1.29
TRIM47Q96LD4 MEOX2-AS1-201ENST00000442176 697 ntTSL 3 BASIC7.01□□□□□ -1.29
TRIM47Q96LD4 AL121871.1-201ENST00000443413 436 ntBASIC7.01□□□□□ -1.29
TRIM47Q96LD4 AC073909.1-201ENST00000447112 999 ntBASIC7.01□□□□□ -1.29
TRIM47Q96LD4 NPM1P39-201ENST00000449818 867 ntBASIC7.01□□□□□ -1.29
TRIM47Q96LD4 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC7.01□□□□□ -1.29
TRIM47Q96LD4 AC018450.1-202ENST00000465880 529 ntTSL 4 BASIC7.01□□□□□ -1.29
TRIM47Q96LD4 AC008571.1-201ENST00000467232 300 ntBASIC7.01□□□□□ -1.29
TRIM47Q96LD4 RN7SL269P-201ENST00000467795 305 ntBASIC7.01□□□□□ -1.29
TRIM47Q96LD4 SIAH1P1-201ENST00000479411 923 ntBASIC7.01□□□□□ -1.29
TRIM47Q96LD4 AC093270.2-201ENST00000486157 792 ntBASIC7.01□□□□□ -1.29
TRIM47Q96LD4 MTCO3P44-201ENST00000510977 541 ntBASIC7.01□□□□□ -1.29
TRIM47Q96LD4 RNU6-408P-201ENST00000515910 100 ntBASIC7.01□□□□□ -1.29
TRIM47Q96LD4 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
TRIM47Q96LD4 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC7.01□□□□□ -1.29
TRIM47Q96LD4 AC113195.1-201ENST00000579952 141 ntBASIC7.01□□□□□ -1.29
TRIM47Q96LD4 MIR1269B-201ENST00000580405 75 ntBASIC7.01□□□□□ -1.29
TRIM47Q96LD4 MIR4505-201ENST00000582238 73 ntBASIC7.01□□□□□ -1.29
TRIM47Q96LD4 OR2L1P-202ENST00000641567 1023 ntBASIC7.01□□□□□ -1.29
TRIM47Q96LD4 NAPEPLD-203ENST00000417955 4988 ntAPPRIS P1 TSL 5 BASIC7.01□□□□□ -1.29
TRIM47Q96LD4 CDK14-206ENST00000436577 4787 ntTSL 2 BASIC7.01□□□□□ -1.29
TRIM47Q96LD4 PDE1A-204ENST00000410103 2000 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
TRIM47Q96LD4 MFSD8-201ENST00000296468 4516 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
TRIM47Q96LD4 ALG13-203ENST00000394780 4133 ntAPPRIS P1 TSL 2 BASIC7.01□□□□□ -1.29
TRIM47Q96LD4 DAZ2-204ENST00000382431 3637 ntAPPRIS ALT2 TSL 1 (best) BASIC7.01□□□□□ -1.29
TRIM47Q96LD4 CUZD1-205ENST00000368904 2903 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
TRIM47Q96LD4 ZCCHC6-201ENST00000277141 5724 ntTSL 2 BASIC7□□□□□ -1.29
TRIM47Q96LD4 CNTRL-204ENST00000373847 3372 ntTSL 1 (best) BASIC7□□□□□ -1.29
TRIM47Q96LD4 AC119674.1-202ENST00000641333 1860 ntBASIC7□□□□□ -1.29
TRIM47Q96LD4 PUM1-207ENST00000440538 3936 ntTSL 1 (best) BASIC7□□□□□ -1.29
TRIM47Q96LD4 LRRTM4-205ENST00000409911 2976 ntAPPRIS ALT1 TSL 5 BASIC7□□□□□ -1.29
TRIM47Q96LD4 CDC27P3-201ENST00000635418 1910 ntBASIC7□□□□□ -1.29
TRIM47Q96LD4 PRSS37-201ENST00000350549 1189 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
TRIM47Q96LD4 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC7□□□□□ -1.29
TRIM47Q96LD4 SNORA64.1-201ENST00000362600 132 ntBASIC7□□□□□ -1.29
TRIM47Q96LD4 Y_RNA.180-201ENST00000363867 113 ntBASIC7□□□□□ -1.29
TRIM47Q96LD4 SNORA70-201ENST00000384436 135 ntBASIC7□□□□□ -1.29
TRIM47Q96LD4 AL359634.1-202ENST00000404721 284 ntBASIC7□□□□□ -1.29
TRIM47Q96LD4 RPL23AP47-201ENST00000408017 460 ntBASIC7□□□□□ -1.29
TRIM47Q96LD4 RNA5SP251-201ENST00000410614 137 ntBASIC7□□□□□ -1.29
TRIM47Q96LD4 Y_RNA.615-201ENST00000410769 117 ntBASIC7□□□□□ -1.29
TRIM47Q96LD4 OR2AT2P-201ENST00000413438 905 ntBASIC7□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 105.3 ms