Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC3.55□□□□□ -1.84
SHROOM3Q8TF72 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC3.55□□□□□ -1.84
SHROOM3Q8TF72 AC007333.2-201ENST00000569998 559 ntTSL 4 BASIC3.55□□□□□ -1.84
SHROOM3Q8TF72 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC3.55□□□□□ -1.84
SHROOM3Q8TF72 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC3.55□□□□□ -1.84
SHROOM3Q8TF72 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC3.55□□□□□ -1.84
SHROOM3Q8TF72 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
SHROOM3Q8TF72 IL23R-202ENST00000395227 1459 ntTSL 3 BASIC3.55□□□□□ -1.84
SHROOM3Q8TF72 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
SHROOM3Q8TF72 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
SHROOM3Q8TF72 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
SHROOM3Q8TF72 AC068647.1-201ENST00000489539 2265 ntBASIC3.55□□□□□ -1.84
SHROOM3Q8TF72 AL132656.2-201ENST00000482985 1837 ntTSL 5 BASIC3.54□□□□□ -1.84
SHROOM3Q8TF72 CDKL4-202ENST00000395035 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC3.54□□□□□ -1.84
SHROOM3Q8TF72 RSL24D1P1-201ENST00000404972 493 ntBASIC3.54□□□□□ -1.84
SHROOM3Q8TF72 RHEBP3-201ENST00000411920 351 ntBASIC3.54□□□□□ -1.84
SHROOM3Q8TF72 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC3.54□□□□□ -1.84
SHROOM3Q8TF72 AC008065.1-201ENST00000428525 348 ntBASIC3.54□□□□□ -1.84
SHROOM3Q8TF72 FTLP19-201ENST00000433300 394 ntBASIC3.54□□□□□ -1.84
SHROOM3Q8TF72 AL512625.3-204ENST00000438699 1031 ntTSL 5 BASIC3.54□□□□□ -1.84
SHROOM3Q8TF72 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC3.54□□□□□ -1.84
SHROOM3Q8TF72 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.54□□□□□ -1.84
SHROOM3Q8TF72 AC112184.1-201ENST00000505179 312 ntBASIC3.54□□□□□ -1.84
SHROOM3Q8TF72 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC3.54□□□□□ -1.84
SHROOM3Q8TF72 AC024132.3-201ENST00000513616 649 ntTSL 5 BASIC3.54□□□□□ -1.84
SHROOM3Q8TF72 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC3.54□□□□□ -1.84
SHROOM3Q8TF72 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC3.54□□□□□ -1.84
SHROOM3Q8TF72 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC3.54□□□□□ -1.84
SHROOM3Q8TF72 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC3.54□□□□□ -1.84
SHROOM3Q8TF72 AC005476.1-201ENST00000554427 397 ntBASIC3.54□□□□□ -1.84
SHROOM3Q8TF72 AC006960.3-201ENST00000561845 705 ntBASIC3.54□□□□□ -1.84
SHROOM3Q8TF72 AL713922.2-201ENST00000619384 716 ntBASIC3.54□□□□□ -1.84
SHROOM3Q8TF72 AL732618.1-201ENST00000623251 301 ntBASIC3.54□□□□□ -1.84
SHROOM3Q8TF72 CR392039.4-201ENST00000624968 501 ntBASIC3.54□□□□□ -1.84
SHROOM3Q8TF72 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC3.54□□□□□ -1.84
SHROOM3Q8TF72 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
SHROOM3Q8TF72 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
SHROOM3Q8TF72 DDX6P1-205ENST00000441966 1436 ntBASIC3.54□□□□□ -1.84
SHROOM3Q8TF72 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
SHROOM3Q8TF72 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC3.54□□□□□ -1.84
SHROOM3Q8TF72 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
SHROOM3Q8TF72 RNU6ATAC10P-201ENST00000408635 111 ntBASIC3.54□□□□□ -1.84
SHROOM3Q8TF72 AJ239321.1-201ENST00000424255 564 ntBASIC3.54□□□□□ -1.84
SHROOM3Q8TF72 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC3.54□□□□□ -1.84
SHROOM3Q8TF72 AL121578.1-201ENST00000428051 892 ntBASIC3.54□□□□□ -1.84
SHROOM3Q8TF72 AC073063.1-201ENST00000434352 607 ntBASIC3.54□□□□□ -1.84
SHROOM3Q8TF72 BX679664.1-201ENST00000434429 253 ntBASIC3.54□□□□□ -1.84
SHROOM3Q8TF72 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC3.54□□□□□ -1.84
SHROOM3Q8TF72 MRPS31P2-201ENST00000451581 518 ntBASIC3.54□□□□□ -1.84
SHROOM3Q8TF72 RPL12P26-201ENST00000452430 487 ntBASIC3.54□□□□□ -1.84
SHROOM3Q8TF72 PDCD10-207ENST00000471885 764 ntTSL 5 BASIC3.54□□□□□ -1.84
SHROOM3Q8TF72 PCBP2P3-201ENST00000509726 843 ntBASIC3.54□□□□□ -1.84
SHROOM3Q8TF72 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC3.54□□□□□ -1.84
SHROOM3Q8TF72 TMPRSS11BNL-205ENST00000514295 1262 ntBASIC3.54□□□□□ -1.84
SHROOM3Q8TF72 RNU1-143P-201ENST00000516296 146 ntBASIC3.54□□□□□ -1.84
SHROOM3Q8TF72 MIR2114-201ENST00000516645 80 ntBASIC3.54□□□□□ -1.84
SHROOM3Q8TF72 AC027309.2-201ENST00000520566 192 ntBASIC3.54□□□□□ -1.84
SHROOM3Q8TF72 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC3.54□□□□□ -1.84
SHROOM3Q8TF72 AC011824.3-201ENST00000585093 563 ntTSL 4 BASIC3.54□□□□□ -1.84
SHROOM3Q8TF72 U1.23-201ENST00000610293 146 ntBASIC3.54□□□□□ -1.84
SHROOM3Q8TF72 RNU1-68P-201ENST00000615382 146 ntBASIC3.54□□□□□ -1.84
SHROOM3Q8TF72 U1.39-201ENST00000621562 146 ntBASIC3.54□□□□□ -1.84
SHROOM3Q8TF72 AC009950.2-201ENST00000636548 183 ntBASIC3.54□□□□□ -1.84
SHROOM3Q8TF72 AC116158.1-201ENST00000560231 2129 ntBASIC3.54□□□□□ -1.84
SHROOM3Q8TF72 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.54□□□□□ -1.84
SHROOM3Q8TF72 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC3.53□□□□□ -1.84
SHROOM3Q8TF72 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.53□□□□□ -1.84
SHROOM3Q8TF72 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC3.53□□□□□ -1.84
SHROOM3Q8TF72 NR1H5P-201ENST00000452683 1377 ntBASIC3.53□□□□□ -1.84
SHROOM3Q8TF72 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
SHROOM3Q8TF72 TAF9BP1-201ENST00000396646 746 ntBASIC3.53□□□□□ -1.84
SHROOM3Q8TF72 MRPS18BP2-201ENST00000434310 759 ntBASIC3.53□□□□□ -1.84
SHROOM3Q8TF72 AC005019.1-201ENST00000436455 431 ntBASIC3.53□□□□□ -1.84
SHROOM3Q8TF72 TMEM244-202ENST00000438392 565 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
SHROOM3Q8TF72 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC3.53□□□□□ -1.84
SHROOM3Q8TF72 THAP6-212ENST00000508105 1103 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
SHROOM3Q8TF72 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC3.53□□□□□ -1.84
SHROOM3Q8TF72 C8orf22-203ENST00000517663 788 ntAPPRIS ALT1 TSL 5 BASIC3.53□□□□□ -1.84
SHROOM3Q8TF72 AC026333.2-201ENST00000542164 106 ntBASIC3.53□□□□□ -1.84
SHROOM3Q8TF72 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC3.53□□□□□ -1.84
SHROOM3Q8TF72 AC025946.2-201ENST00000603398 234 ntBASIC3.53□□□□□ -1.84
SHROOM3Q8TF72 AL161912.3-201ENST00000605404 628 ntBASIC3.53□□□□□ -1.84
SHROOM3Q8TF72 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.53□□□□□ -1.84
SHROOM3Q8TF72 CEP170P1-201ENST00000502249 4587 ntBASIC3.53□□□□□ -1.84
SHROOM3Q8TF72 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC3.53□□□□□ -1.84
SHROOM3Q8TF72 RPS4XP5-202ENST00000449995 1334 ntBASIC3.53□□□□□ -1.84
SHROOM3Q8TF72 AL645937.1-201ENST00000641739 1652 ntBASIC3.53□□□□□ -1.84
SHROOM3Q8TF72 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
SHROOM3Q8TF72 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.53□□□□□ -1.84
SHROOM3Q8TF72 SLC41A2-201ENST00000258538 4449 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
SHROOM3Q8TF72 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC3.53□□□□□ -1.85
SHROOM3Q8TF72 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC3.52□□□□□ -1.85
SHROOM3Q8TF72 MIR30E-201ENST00000362104 92 ntBASIC3.52□□□□□ -1.85
SHROOM3Q8TF72 SNORA38.1-201ENST00000364172 131 ntBASIC3.52□□□□□ -1.85
SHROOM3Q8TF72 MIR708-201ENST00000390708 88 ntBASIC3.52□□□□□ -1.85
SHROOM3Q8TF72 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC3.52□□□□□ -1.85
SHROOM3Q8TF72 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC3.52□□□□□ -1.85
SHROOM3Q8TF72 AC080162.1-201ENST00000480764 491 ntTSL 3 BASIC3.52□□□□□ -1.85
SHROOM3Q8TF72 AC023141.12-201ENST00000512399 199 ntBASIC3.52□□□□□ -1.85
SHROOM3Q8TF72 AP000926.4-201ENST00000527351 454 ntBASIC3.52□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 81.2 ms