Protein–RNA interactions for Protein: Q8NHS4

CLHC1, Clathrin heavy chain linker domain-containing protein 1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1Q8NHS4 OR5AW1P-201ENST00000426334 1006 ntBASIC3.62□□□□□ -1.83
CLHC1Q8NHS4 AL583785.1-201ENST00000428006 512 ntTSL 2 BASIC3.62□□□□□ -1.83
CLHC1Q8NHS4 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC3.62□□□□□ -1.83
CLHC1Q8NHS4 MTCO1P43-201ENST00000431831 488 ntBASIC3.62□□□□□ -1.83
CLHC1Q8NHS4 CKS1BP5-201ENST00000434172 273 ntBASIC3.62□□□□□ -1.83
CLHC1Q8NHS4 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC3.62□□□□□ -1.83
CLHC1Q8NHS4 HMGB1P45-201ENST00000435986 653 ntBASIC3.62□□□□□ -1.83
CLHC1Q8NHS4 AC009263.1-201ENST00000441193 1239 ntBASIC3.62□□□□□ -1.83
CLHC1Q8NHS4 RPL23AP33-201ENST00000442301 452 ntBASIC3.62□□□□□ -1.83
CLHC1Q8NHS4 AC010307.1-201ENST00000467206 836 ntBASIC3.62□□□□□ -1.83
CLHC1Q8NHS4 NCOR1P1-202ENST00000486162 291 ntBASIC3.62□□□□□ -1.83
CLHC1Q8NHS4 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC3.62□□□□□ -1.83
CLHC1Q8NHS4 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC3.62□□□□□ -1.83
CLHC1Q8NHS4 RN7SKP83-201ENST00000516512 178 ntBASIC3.62□□□□□ -1.83
CLHC1Q8NHS4 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC3.62□□□□□ -1.83
CLHC1Q8NHS4 IGKV2-36-201ENST00000519999 223 ntBASIC3.62□□□□□ -1.83
CLHC1Q8NHS4 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC3.62□□□□□ -1.83
CLHC1Q8NHS4 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC3.62□□□□□ -1.83
CLHC1Q8NHS4 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC3.62□□□□□ -1.83
CLHC1Q8NHS4 AC092747.2-201ENST00000545069 983 ntBASIC3.62□□□□□ -1.83
CLHC1Q8NHS4 AC007424.1-205ENST00000552615 579 ntTSL 4 BASIC3.62□□□□□ -1.83
CLHC1Q8NHS4 ZFAND6-204ENST00000558087 909 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
CLHC1Q8NHS4 AC012557.1-201ENST00000607115 611 ntBASIC3.62□□□□□ -1.83
CLHC1Q8NHS4 MIR378J-201ENST00000611988 109 ntBASIC3.62□□□□□ -1.83
CLHC1Q8NHS4 MIR6864-201ENST00000617935 70 ntBASIC3.62□□□□□ -1.83
CLHC1Q8NHS4 MIR4496-201ENST00000635896 61 ntBASIC3.62□□□□□ -1.83
CLHC1Q8NHS4 MIR492-201ENST00000638676 116 ntBASIC3.62□□□□□ -1.83
CLHC1Q8NHS4 OR6C71P-202ENST00000641886 1107 ntBASIC3.62□□□□□ -1.83
CLHC1Q8NHS4 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC3.62□□□□□ -1.83
CLHC1Q8NHS4 AC073073.2-201ENST00000609827 2578 ntBASIC3.61□□□□□ -1.83
CLHC1Q8NHS4 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.61□□□□□ -1.83
CLHC1Q8NHS4 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC3.61□□□□□ -1.83
CLHC1Q8NHS4 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC3.61□□□□□ -1.83
CLHC1Q8NHS4 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
CLHC1Q8NHS4 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
CLHC1Q8NHS4 AC007256.1-201ENST00000392253 2765 ntBASIC3.61□□□□□ -1.83
CLHC1Q8NHS4 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC3.61□□□□□ -1.83
CLHC1Q8NHS4 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
CLHC1Q8NHS4 MIR372-201ENST00000362225 67 ntBASIC3.61□□□□□ -1.83
CLHC1Q8NHS4 SNORA62-201ENST00000365493 153 ntBASIC3.61□□□□□ -1.83
CLHC1Q8NHS4 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.61□□□□□ -1.83
CLHC1Q8NHS4 SNORA70C-201ENST00000384538 135 ntBASIC3.61□□□□□ -1.83
CLHC1Q8NHS4 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC3.61□□□□□ -1.83
CLHC1Q8NHS4 RPL21P109-201ENST00000422213 475 ntBASIC3.61□□□□□ -1.83
CLHC1Q8NHS4 IGKV1OR9-2-201ENST00000431378 277 ntBASIC3.61□□□□□ -1.83
CLHC1Q8NHS4 RPL21P112-201ENST00000434403 463 ntBASIC3.61□□□□□ -1.83
CLHC1Q8NHS4 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC3.61□□□□□ -1.83
CLHC1Q8NHS4 AC034228.3-201ENST00000446275 562 ntTSL 3 BASIC3.61□□□□□ -1.83
CLHC1Q8NHS4 AC005304.1-201ENST00000457609 405 ntTSL 3 BASIC3.61□□□□□ -1.83
CLHC1Q8NHS4 LINC01192-206ENST00000489012 818 ntTSL 5 BASIC3.61□□□□□ -1.83
CLHC1Q8NHS4 AC093267.1-201ENST00000489176 961 ntBASIC3.61□□□□□ -1.83
CLHC1Q8NHS4 AL035404.1-201ENST00000497982 568 ntBASIC3.61□□□□□ -1.83
CLHC1Q8NHS4 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC3.61□□□□□ -1.83
CLHC1Q8NHS4 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC3.61□□□□□ -1.83
CLHC1Q8NHS4 FTH1P21-201ENST00000512179 511 ntBASIC3.61□□□□□ -1.83
CLHC1Q8NHS4 AC108043.1-201ENST00000512696 574 ntBASIC3.61□□□□□ -1.83
CLHC1Q8NHS4 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC3.61□□□□□ -1.83
CLHC1Q8NHS4 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC3.61□□□□□ -1.83
CLHC1Q8NHS4 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC3.61□□□□□ -1.83
CLHC1Q8NHS4 AC092868.3-201ENST00000560515 784 ntBASIC3.61□□□□□ -1.83
CLHC1Q8NHS4 IGKV1OR2-118-201ENST00000603238 347 ntBASIC3.61□□□□□ -1.83
CLHC1Q8NHS4 AL354760.1-201ENST00000608357 643 ntBASIC3.61□□□□□ -1.83
CLHC1Q8NHS4 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC3.61□□□□□ -1.83
CLHC1Q8NHS4 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
CLHC1Q8NHS4 PLCE1P1-201ENST00000622094 305 ntBASIC3.61□□□□□ -1.83
CLHC1Q8NHS4 AF001550.2-201ENST00000636643 217 ntBASIC3.61□□□□□ -1.83
CLHC1Q8NHS4 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
CLHC1Q8NHS4 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
CLHC1Q8NHS4 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC3.61□□□□□ -1.83
CLHC1Q8NHS4 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
CLHC1Q8NHS4 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
CLHC1Q8NHS4 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
CLHC1Q8NHS4 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
CLHC1Q8NHS4 IL23R-202ENST00000395227 1459 ntTSL 3 BASIC3.6□□□□□ -1.83
CLHC1Q8NHS4 AC024560.2-201ENST00000507981 1497 ntBASIC3.6□□□□□ -1.83
CLHC1Q8NHS4 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
CLHC1Q8NHS4 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
CLHC1Q8NHS4 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
CLHC1Q8NHS4 SPRR2C-201ENST00000290702 219 ntBASIC3.6□□□□□ -1.83
CLHC1Q8NHS4 MIR591-201ENST00000385290 95 ntBASIC3.6□□□□□ -1.83
CLHC1Q8NHS4 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
CLHC1Q8NHS4 EI24P1-201ENST00000416584 867 ntBASIC3.6□□□□□ -1.83
CLHC1Q8NHS4 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC3.6□□□□□ -1.83
CLHC1Q8NHS4 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC3.6□□□□□ -1.83
CLHC1Q8NHS4 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC3.6□□□□□ -1.83
CLHC1Q8NHS4 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC3.6□□□□□ -1.83
CLHC1Q8NHS4 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC3.6□□□□□ -1.83
CLHC1Q8NHS4 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC3.6□□□□□ -1.83
CLHC1Q8NHS4 AC096992.1-201ENST00000459808 709 ntBASIC3.6□□□□□ -1.83
CLHC1Q8NHS4 HMGN1P8-201ENST00000463578 288 ntBASIC3.6□□□□□ -1.83
CLHC1Q8NHS4 RPS4XP13-201ENST00000483219 789 ntBASIC3.6□□□□□ -1.83
CLHC1Q8NHS4 HMGB3P15-201ENST00000507326 574 ntBASIC3.6□□□□□ -1.83
CLHC1Q8NHS4 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC3.6□□□□□ -1.83
CLHC1Q8NHS4 RN7SKP122-201ENST00000515923 296 ntBASIC3.6□□□□□ -1.83
CLHC1Q8NHS4 RN7SKP209-201ENST00000516888 304 ntBASIC3.6□□□□□ -1.83
CLHC1Q8NHS4 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC3.6□□□□□ -1.83
CLHC1Q8NHS4 CARD8-211ENST00000519332 500 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
CLHC1Q8NHS4 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.6□□□□□ -1.83
CLHC1Q8NHS4 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC3.6□□□□□ -1.83
CLHC1Q8NHS4 MIR4697-201ENST00000582977 78 ntBASIC3.6□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 83.9 ms