Protein–RNA interactions for Protein: Q8NEF3

CCDC112, Coiled-coil domain-containing protein 112, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC112Q8NEF3 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.95□□□□□ -1.78
CCDC112Q8NEF3 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
CCDC112Q8NEF3 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
CCDC112Q8NEF3 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
CCDC112Q8NEF3 IQCM-206ENST00000636793 1900 ntAPPRIS P5 TSL 5 BASIC3.94□□□□□ -1.78
CCDC112Q8NEF3 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
CCDC112Q8NEF3 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC3.94□□□□□ -1.78
CCDC112Q8NEF3 MIR92A2-201ENST00000385299 75 ntBASIC3.94□□□□□ -1.78
CCDC112Q8NEF3 ATP5F1P3-201ENST00000397213 657 ntBASIC3.94□□□□□ -1.78
CCDC112Q8NEF3 HMGB3P18-201ENST00000406327 590 ntBASIC3.94□□□□□ -1.78
CCDC112Q8NEF3 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.94□□□□□ -1.78
CCDC112Q8NEF3 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
CCDC112Q8NEF3 TCEA1P4-201ENST00000415066 844 ntBASIC3.94□□□□□ -1.78
CCDC112Q8NEF3 GTF2IP23-201ENST00000423746 351 ntBASIC3.94□□□□□ -1.78
CCDC112Q8NEF3 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC3.94□□□□□ -1.78
CCDC112Q8NEF3 ARL4AP4-201ENST00000434170 518 ntBASIC3.94□□□□□ -1.78
CCDC112Q8NEF3 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
CCDC112Q8NEF3 AC010655.1-201ENST00000449336 292 ntBASIC3.94□□□□□ -1.78
CCDC112Q8NEF3 RPL12P26-201ENST00000452430 487 ntBASIC3.94□□□□□ -1.78
CCDC112Q8NEF3 AL049830.2-201ENST00000480072 201 ntBASIC3.94□□□□□ -1.78
CCDC112Q8NEF3 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC3.94□□□□□ -1.78
CCDC112Q8NEF3 SNORA67.7-201ENST00000516664 135 ntBASIC3.94□□□□□ -1.78
CCDC112Q8NEF3 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC3.94□□□□□ -1.78
CCDC112Q8NEF3 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC3.94□□□□□ -1.78
CCDC112Q8NEF3 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC3.94□□□□□ -1.78
CCDC112Q8NEF3 AC023161.2-201ENST00000551218 780 ntBASIC3.94□□□□□ -1.78
CCDC112Q8NEF3 AL845331.3-202ENST00000562856 261 ntBASIC3.94□□□□□ -1.78
CCDC112Q8NEF3 AC004160.1-201ENST00000625468 929 ntTSL 5 BASIC3.94□□□□□ -1.78
CCDC112Q8NEF3 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
CCDC112Q8NEF3 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC3.94□□□□□ -1.78
CCDC112Q8NEF3 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC3.94□□□□□ -1.78
CCDC112Q8NEF3 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC3.93□□□□□ -1.78
CCDC112Q8NEF3 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
CCDC112Q8NEF3 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC3.93□□□□□ -1.78
CCDC112Q8NEF3 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC3.93□□□□□ -1.78
CCDC112Q8NEF3 MIR670-201ENST00000390142 98 ntBASIC3.93□□□□□ -1.78
CCDC112Q8NEF3 SOD2P1-201ENST00000396543 562 ntBASIC3.93□□□□□ -1.78
CCDC112Q8NEF3 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC3.93□□□□□ -1.78
CCDC112Q8NEF3 AL389915.1-201ENST00000422463 466 ntBASIC3.93□□□□□ -1.78
CCDC112Q8NEF3 LINC01468-201ENST00000422763 570 ntTSL 3 BASIC3.93□□□□□ -1.78
CCDC112Q8NEF3 FAR1P1-201ENST00000427163 934 ntBASIC3.93□□□□□ -1.78
CCDC112Q8NEF3 AL050321.1-201ENST00000432363 400 ntBASIC3.93□□□□□ -1.78
CCDC112Q8NEF3 AC000111.1-201ENST00000441019 221 ntTSL 3 BASIC3.93□□□□□ -1.78
CCDC112Q8NEF3 AL357552.1-201ENST00000445254 415 ntBASIC3.93□□□□□ -1.78
CCDC112Q8NEF3 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC3.93□□□□□ -1.78
CCDC112Q8NEF3 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC3.93□□□□□ -1.78
CCDC112Q8NEF3 RNU6-1218P-201ENST00000458990 108 ntBASIC3.93□□□□□ -1.78
CCDC112Q8NEF3 TIFA-202ENST00000500655 769 ntAPPRIS P1 TSL 3 BASIC3.93□□□□□ -1.78
CCDC112Q8NEF3 AC010627.1-201ENST00000503819 1294 ntBASIC3.93□□□□□ -1.78
CCDC112Q8NEF3 AC108471.1-201ENST00000513977 287 ntBASIC3.93□□□□□ -1.78
CCDC112Q8NEF3 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
CCDC112Q8NEF3 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC3.93□□□□□ -1.78
CCDC112Q8NEF3 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC3.93□□□□□ -1.78
CCDC112Q8NEF3 LINC02185-202ENST00000576797 568 ntTSL 3 BASIC3.93□□□□□ -1.78
CCDC112Q8NEF3 RN7SL703P-201ENST00000578485 302 ntBASIC3.93□□□□□ -1.78
CCDC112Q8NEF3 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC3.93□□□□□ -1.78
CCDC112Q8NEF3 AC015726.1-201ENST00000602353 681 ntBASIC3.93□□□□□ -1.78
CCDC112Q8NEF3 PSMA6P4-201ENST00000603247 718 ntBASIC3.93□□□□□ -1.78
CCDC112Q8NEF3 AL357559.1-201ENST00000622228 274 ntBASIC3.93□□□□□ -1.78
CCDC112Q8NEF3 OR8B1P-202ENST00000641132 1178 ntBASIC3.93□□□□□ -1.78
CCDC112Q8NEF3 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.93□□□□□ -1.78
CCDC112Q8NEF3 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC3.93□□□□□ -1.78
CCDC112Q8NEF3 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.93□□□□□ -1.78
CCDC112Q8NEF3 MTCO1P14-201ENST00000441695 1559 ntBASIC3.93□□□□□ -1.78
CCDC112Q8NEF3 AC004972.1-201ENST00000623934 2209 ntBASIC3.93□□□□□ -1.78
CCDC112Q8NEF3 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
CCDC112Q8NEF3 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
CCDC112Q8NEF3 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.92□□□□□ -1.78
CCDC112Q8NEF3 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
CCDC112Q8NEF3 RNU6-304P-201ENST00000364855 107 ntBASIC3.92□□□□□ -1.78
CCDC112Q8NEF3 SNORD6-201ENST00000365444 73 ntBASIC3.92□□□□□ -1.78
CCDC112Q8NEF3 OR2B3-201ENST00000377173 1106 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
CCDC112Q8NEF3 AC126124.2-201ENST00000413542 321 ntBASIC3.92□□□□□ -1.78
CCDC112Q8NEF3 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC3.92□□□□□ -1.78
CCDC112Q8NEF3 AC093578.1-201ENST00000415219 368 ntBASIC3.92□□□□□ -1.78
CCDC112Q8NEF3 AC245291.1-201ENST00000419501 328 ntBASIC3.92□□□□□ -1.78
CCDC112Q8NEF3 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC3.92□□□□□ -1.78
CCDC112Q8NEF3 SDCBPP2-201ENST00000424643 885 ntBASIC3.92□□□□□ -1.78
CCDC112Q8NEF3 AP000907.1-201ENST00000428428 510 ntBASIC3.92□□□□□ -1.78
CCDC112Q8NEF3 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC3.92□□□□□ -1.78
CCDC112Q8NEF3 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.92□□□□□ -1.78
CCDC112Q8NEF3 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC3.92□□□□□ -1.78
CCDC112Q8NEF3 LINC01312-202ENST00000456347 813 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
CCDC112Q8NEF3 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC3.92□□□□□ -1.78
CCDC112Q8NEF3 AP002884.2-201ENST00000471647 395 ntBASIC3.92□□□□□ -1.78
CCDC112Q8NEF3 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC3.92□□□□□ -1.78
CCDC112Q8NEF3 AC007688.1-201ENST00000475592 759 ntBASIC3.92□□□□□ -1.78
CCDC112Q8NEF3 AP000563.1-201ENST00000490865 758 ntBASIC3.92□□□□□ -1.78
CCDC112Q8NEF3 AL139099.1-201ENST00000497398 403 ntBASIC3.92□□□□□ -1.78
CCDC112Q8NEF3 AC114967.1-201ENST00000504890 259 ntBASIC3.92□□□□□ -1.78
CCDC112Q8NEF3 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
CCDC112Q8NEF3 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC3.92□□□□□ -1.78
CCDC112Q8NEF3 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC3.92□□□□□ -1.78
CCDC112Q8NEF3 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC3.92□□□□□ -1.78
CCDC112Q8NEF3 AC026333.2-201ENST00000542164 106 ntBASIC3.92□□□□□ -1.78
CCDC112Q8NEF3 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC3.92□□□□□ -1.78
CCDC112Q8NEF3 PPFIA2-AS1-210ENST00000553197 875 ntTSL 5 BASIC3.92□□□□□ -1.78
CCDC112Q8NEF3 DUXAP6-201ENST00000553858 601 ntBASIC3.92□□□□□ -1.78
CCDC112Q8NEF3 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC3.92□□□□□ -1.78
CCDC112Q8NEF3 HSPE1P5-201ENST00000561489 272 ntBASIC3.92□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 114.5 ms