Protein–RNA interactions for Protein: Q8N2C3

DEPDC4, DEP domain-containing protein 4, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4Q8N2C3 AC009779.8-202ENST00000607990 932 ntBASIC6.24□□□□□ -1.41
DEPDC4Q8N2C3 Z98949.1-217ENST00000609275 994 ntTSL 5 BASIC6.24□□□□□ -1.41
DEPDC4Q8N2C3 Z82243.1-201ENST00000609432 473 ntBASIC6.24□□□□□ -1.41
DEPDC4Q8N2C3 FAM13A-AS1_2.1-201ENST00000611121 108 ntBASIC6.24□□□□□ -1.41
DEPDC4Q8N2C3 AL138693.1-201ENST00000622219 129 ntBASIC6.24□□□□□ -1.41
DEPDC4Q8N2C3 AL357559.1-201ENST00000622228 274 ntBASIC6.24□□□□□ -1.41
DEPDC4Q8N2C3 AC091925.1-201ENST00000623204 462 ntBASIC6.24□□□□□ -1.41
DEPDC4Q8N2C3 NBEA-207ENST00000537702 4089 ntTSL 2 BASIC6.24□□□□□ -1.41
DEPDC4Q8N2C3 MARCH7-201ENST00000259050 5922 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
DEPDC4Q8N2C3 PHYHIPL-201ENST00000373878 3569 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
DEPDC4Q8N2C3 IQCB2P-201ENST00000401788 1633 ntBASIC6.24□□□□□ -1.41
DEPDC4Q8N2C3 ENTPD1-AS1-202ENST00000416301 4241 ntTSL 2 BASIC6.24□□□□□ -1.41
DEPDC4Q8N2C3 UNC5C-205ENST00000610318 9403 ntTSL 5 BASIC6.24□□□□□ -1.41
DEPDC4Q8N2C3 LINC00891-201ENST00000627173 4113 ntTSL 2 BASIC6.24□□□□□ -1.41
DEPDC4Q8N2C3 LRRC49-204ENST00000544974 6605 ntTSL 2 BASIC6.24□□□□□ -1.41
DEPDC4Q8N2C3 AC116667.1-201ENST00000604855 2072 ntBASIC6.24□□□□□ -1.41
DEPDC4Q8N2C3 MAGI2-235ENST00000637282 3174 ntTSL 5 BASIC6.24□□□□□ -1.41
DEPDC4Q8N2C3 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC6.24□□□□□ -1.41
DEPDC4Q8N2C3 CCDC125-202ENST00000396496 4198 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
DEPDC4Q8N2C3 SGIP1-201ENST00000237247 3997 ntAPPRIS ALT2 TSL 5 BASIC6.24□□□□□ -1.41
DEPDC4Q8N2C3 DCX-206ENST00000496551 1320 ntAPPRIS P4 TSL 2 BASIC6.24□□□□□ -1.41
DEPDC4Q8N2C3 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC6.24□□□□□ -1.41
DEPDC4Q8N2C3 SETDB2-201ENST00000258672 2138 ntTSL 5 BASIC6.23□□□□□ -1.41
DEPDC4Q8N2C3 HSD17B4-202ENST00000414835 2551 ntTSL 2 BASIC6.23□□□□□ -1.41
DEPDC4Q8N2C3 DYNC1I2-202ENST00000397119 2604 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
DEPDC4Q8N2C3 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC6.23□□□□□ -1.41
DEPDC4Q8N2C3 CCDC190-202ENST00000367911 1395 ntAPPRIS P2 TSL 3 BASIC6.23□□□□□ -1.41
DEPDC4Q8N2C3 GPM6A-201ENST00000280187 2854 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
DEPDC4Q8N2C3 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC6.23□□□□□ -1.41
DEPDC4Q8N2C3 SCGB1A1-201ENST00000278282 441 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
DEPDC4Q8N2C3 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
DEPDC4Q8N2C3 MIR152-201ENST00000385212 87 ntBASIC6.23□□□□□ -1.41
DEPDC4Q8N2C3 RNU1-56P-201ENST00000391303 164 ntBASIC6.23□□□□□ -1.41
DEPDC4Q8N2C3 EIF4E2P1-201ENST00000393781 255 ntBASIC6.23□□□□□ -1.41
DEPDC4Q8N2C3 RNU2-36P-201ENST00000410361 191 ntBASIC6.23□□□□□ -1.41
DEPDC4Q8N2C3 BX323014.1-201ENST00000412876 237 ntBASIC6.23□□□□□ -1.41
DEPDC4Q8N2C3 AL354890.1-201ENST00000413730 346 ntBASIC6.23□□□□□ -1.41
DEPDC4Q8N2C3 AC019130.1-201ENST00000413841 391 ntTSL 2 BASIC6.23□□□□□ -1.41
DEPDC4Q8N2C3 LINC01980-202ENST00000425195 491 ntTSL 3 BASIC6.23□□□□□ -1.41
DEPDC4Q8N2C3 AL121902.1-201ENST00000426963 459 ntTSL 2 BASIC6.23□□□□□ -1.41
DEPDC4Q8N2C3 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC6.23□□□□□ -1.41
DEPDC4Q8N2C3 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC6.23□□□□□ -1.41
DEPDC4Q8N2C3 AC019211.1-201ENST00000432993 754 ntTSL 3 BASIC6.23□□□□□ -1.41
DEPDC4Q8N2C3 FTLP19-201ENST00000433300 394 ntBASIC6.23□□□□□ -1.41
DEPDC4Q8N2C3 AC006026.3-201ENST00000454029 143 ntTSL 3 BASIC6.23□□□□□ -1.41
DEPDC4Q8N2C3 Y_RNA.653-201ENST00000459091 95 ntBASIC6.23□□□□□ -1.41
DEPDC4Q8N2C3 RPSAP24-201ENST00000461543 873 ntBASIC6.23□□□□□ -1.41
DEPDC4Q8N2C3 ST13P14-201ENST00000474095 734 ntBASIC6.23□□□□□ -1.41
DEPDC4Q8N2C3 PPP1R11P1-201ENST00000486095 376 ntBASIC6.23□□□□□ -1.41
DEPDC4Q8N2C3 AC024558.1-201ENST00000505008 528 ntBASIC6.23□□□□□ -1.41
DEPDC4Q8N2C3 MTCYBP40-201ENST00000509390 1135 ntBASIC6.23□□□□□ -1.41
DEPDC4Q8N2C3 AC092903.2-201ENST00000510244 427 ntTSL 5 BASIC6.23□□□□□ -1.41
DEPDC4Q8N2C3 AC017037.2-201ENST00000513850 890 ntBASIC6.23□□□□□ -1.41
DEPDC4Q8N2C3 HMGN1P9-201ENST00000515212 298 ntBASIC6.23□□□□□ -1.41
DEPDC4Q8N2C3 RN7SKP24-201ENST00000515888 284 ntBASIC6.23□□□□□ -1.41
DEPDC4Q8N2C3 RNU6-1038P-201ENST00000516516 104 ntBASIC6.23□□□□□ -1.41
DEPDC4Q8N2C3 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC6.23□□□□□ -1.41
DEPDC4Q8N2C3 IGLVIV-53-201ENST00000520107 367 ntBASIC6.23□□□□□ -1.41
DEPDC4Q8N2C3 IGLV3-6-201ENST00000523937 250 ntBASIC6.23□□□□□ -1.41
DEPDC4Q8N2C3 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC6.23□□□□□ -1.41
DEPDC4Q8N2C3 AP000763.2-201ENST00000540641 163 ntBASIC6.23□□□□□ -1.41
DEPDC4Q8N2C3 A2MP1-201ENST00000543404 1201 ntTSL 5 BASIC6.23□□□□□ -1.41
DEPDC4Q8N2C3 AC090181.1-201ENST00000560446 264 ntTSL 3 BASIC6.23□□□□□ -1.41
DEPDC4Q8N2C3 LINC02129-201ENST00000564381 692 ntTSL 5 BASIC6.23□□□□□ -1.41
DEPDC4Q8N2C3 AC092132.1-201ENST00000570859 352 ntTSL 3 BASIC6.23□□□□□ -1.41
DEPDC4Q8N2C3 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC6.23□□□□□ -1.41
DEPDC4Q8N2C3 AC092960.1-201ENST00000604762 351 ntBASIC6.23□□□□□ -1.41
DEPDC4Q8N2C3 AC012443.1-201ENST00000605605 231 ntBASIC6.23□□□□□ -1.41
DEPDC4Q8N2C3 AC133104.2-201ENST00000615272 193 ntBASIC6.23□□□□□ -1.41
DEPDC4Q8N2C3 TCL6_3.1-201ENST00000619064 137 ntBASIC6.23□□□□□ -1.41
DEPDC4Q8N2C3 TRPC4-210ENST00000625583 3009 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
DEPDC4Q8N2C3 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
DEPDC4Q8N2C3 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC6.23□□□□□ -1.41
DEPDC4Q8N2C3 LINC02119-201ENST00000508853 2573 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
DEPDC4Q8N2C3 SNW1-205ENST00000555761 1855 ntTSL 2 BASIC6.23□□□□□ -1.41
DEPDC4Q8N2C3 HORMAD2-202ENST00000403975 2115 ntAPPRIS P1 TSL 2 BASIC6.23□□□□□ -1.41
DEPDC4Q8N2C3 NUMB-203ENST00000359560 3309 ntAPPRIS P3 TSL 5 BASIC6.23□□□□□ -1.41
DEPDC4Q8N2C3 MMAA-205ENST00000541599 1437 ntTSL 5 BASIC6.23□□□□□ -1.41
DEPDC4Q8N2C3 AC023245.2-201ENST00000530760 2978 ntBASIC6.23□□□□□ -1.41
DEPDC4Q8N2C3 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC6.23□□□□□ -1.41
DEPDC4Q8N2C3 SLC4A4-202ENST00000340595 7640 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
DEPDC4Q8N2C3 ECT2L-205ENST00000541398 4483 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
DEPDC4Q8N2C3 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
DEPDC4Q8N2C3 ADGRF1-203ENST00000371253 5468 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
DEPDC4Q8N2C3 GJA10-203ENST00000638915 1479 ntAPPRIS ALT2 TSL 5 BASIC6.22□□□□□ -1.41
DEPDC4Q8N2C3 CCAR1-201ENST00000265872 4683 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
DEPDC4Q8N2C3 POLR1D-218ENST00000636817 4592 ntTSL 5 BASIC6.22□□□□□ -1.41
DEPDC4Q8N2C3 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
DEPDC4Q8N2C3 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
DEPDC4Q8N2C3 NBPF19-205ENST00000612881 3715 ntTSL 5 BASIC6.22□□□□□ -1.41
DEPDC4Q8N2C3 SYT14-207ENST00000629778 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
DEPDC4Q8N2C3 ZNF607-202ENST00000395835 4003 ntAPPRIS ALT2 TSL 2 BASIC6.22□□□□□ -1.41
DEPDC4Q8N2C3 AC020658.2-201ENST00000559030 4020 ntBASIC6.22□□□□□ -1.41
DEPDC4Q8N2C3 LRRC37B-202ENST00000341671 3025 ntAPPRIS P3 TSL 1 (best) BASIC6.22□□□□□ -1.41
DEPDC4Q8N2C3 THEMIS-206ENST00000630369 2786 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
DEPDC4Q8N2C3 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC6.22□□□□□ -1.41
DEPDC4Q8N2C3 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC6.22□□□□□ -1.41
DEPDC4Q8N2C3 Y_RNA.31-201ENST00000362574 102 ntBASIC6.22□□□□□ -1.41
DEPDC4Q8N2C3 RNA5SP114-201ENST00000363780 113 ntBASIC6.22□□□□□ -1.41
DEPDC4Q8N2C3 RNU6-1188P-201ENST00000363795 107 ntBASIC6.22□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 105.4 ms