Protein–RNA interactions for Protein: Q8IXF0

NPAS3, Neuronal PAS domain-containing protein 3, humanhuman

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3Q8IXF0 DSTNP4-201ENST00000399472 474 ntBASIC6.49□□□□□ -1.37
NPAS3Q8IXF0 RNA5SP178-201ENST00000410380 128 ntBASIC6.49□□□□□ -1.37
NPAS3Q8IXF0 RNU6-735P-201ENST00000410612 107 ntBASIC6.49□□□□□ -1.37
NPAS3Q8IXF0 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC6.49□□□□□ -1.37
NPAS3Q8IXF0 VDAC1P9-201ENST00000412766 841 ntBASIC6.49□□□□□ -1.37
NPAS3Q8IXF0 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC6.49□□□□□ -1.37
NPAS3Q8IXF0 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC6.49□□□□□ -1.37
NPAS3Q8IXF0 RPL34P27-201ENST00000428810 349 ntBASIC6.49□□□□□ -1.37
NPAS3Q8IXF0 AC119618.1-201ENST00000434191 222 ntBASIC6.49□□□□□ -1.37
NPAS3Q8IXF0 PCBP2P1-201ENST00000437262 977 ntBASIC6.49□□□□□ -1.37
NPAS3Q8IXF0 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC6.49□□□□□ -1.37
NPAS3Q8IXF0 AL353093.1-201ENST00000441292 436 ntBASIC6.49□□□□□ -1.37
NPAS3Q8IXF0 AL161636.2-201ENST00000445179 927 ntBASIC6.49□□□□□ -1.37
NPAS3Q8IXF0 AC132807.1-201ENST00000449613 458 ntTSL 3 BASIC6.49□□□□□ -1.37
NPAS3Q8IXF0 AC097493.1-201ENST00000463958 372 ntBASIC6.49□□□□□ -1.37
NPAS3Q8IXF0 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC6.49□□□□□ -1.37
NPAS3Q8IXF0 RN7SL273P-201ENST00000481561 299 ntBASIC6.49□□□□□ -1.37
NPAS3Q8IXF0 AC023818.1-201ENST00000498379 384 ntBASIC6.49□□□□□ -1.37
NPAS3Q8IXF0 RNU4ATAC8P-201ENST00000516196 109 ntBASIC6.49□□□□□ -1.37
NPAS3Q8IXF0 SNORD116.3-201ENST00000517176 78 ntBASIC6.49□□□□□ -1.37
NPAS3Q8IXF0 OR5M2P-201ENST00000529003 936 ntBASIC6.49□□□□□ -1.37
NPAS3Q8IXF0 AC068446.3-201ENST00000555285 382 ntBASIC6.49□□□□□ -1.37
NPAS3Q8IXF0 AC009019.1-203ENST00000568603 515 ntTSL 5 BASIC6.49□□□□□ -1.37
NPAS3Q8IXF0 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC6.49□□□□□ -1.37
NPAS3Q8IXF0 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC6.49□□□□□ -1.37
NPAS3Q8IXF0 NPIPB1P-202ENST00000588786 828 ntBASIC6.49□□□□□ -1.37
NPAS3Q8IXF0 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC6.49□□□□□ -1.37
NPAS3Q8IXF0 AC130352.1-201ENST00000602979 661 ntBASIC6.49□□□□□ -1.37
NPAS3Q8IXF0 AC011468.4-201ENST00000603942 409 ntBASIC6.49□□□□□ -1.37
NPAS3Q8IXF0 AC009779.6-201ENST00000603972 165 ntBASIC6.49□□□□□ -1.37
NPAS3Q8IXF0 SDR42E1P2-201ENST00000614861 481 ntBASIC6.49□□□□□ -1.37
NPAS3Q8IXF0 AL391095.2-201ENST00000615228 378 ntTSL 3 BASIC6.49□□□□□ -1.37
NPAS3Q8IXF0 SDR42E1P4-201ENST00000620894 481 ntBASIC6.49□□□□□ -1.37
NPAS3Q8IXF0 AC007744.1-201ENST00000607540 2289 ntTSL 5 BASIC6.49□□□□□ -1.37
NPAS3Q8IXF0 PLCB4-202ENST00000378473 5619 ntAPPRIS ALT1 TSL 1 (best) BASIC6.49□□□□□ -1.37
NPAS3Q8IXF0 EXPH5-203ENST00000525344 6542 ntAPPRIS ALT2 TSL 1 (best) BASIC6.49□□□□□ -1.37
NPAS3Q8IXF0 GOLGB1-202ENST00000393667 11198 ntAPPRIS ALT2 TSL 1 (best) BASIC6.49□□□□□ -1.37
NPAS3Q8IXF0 CR1-203ENST00000367051 7469 ntTSL 5 BASIC6.49□□□□□ -1.37
NPAS3Q8IXF0 SCOC-204ENST00000394205 1964 ntTSL 2 BASIC6.49□□□□□ -1.37
NPAS3Q8IXF0 RPL37-201ENST00000274242 7686 ntAPPRIS P2 TSL 1 (best) BASIC6.49□□□□□ -1.37
NPAS3Q8IXF0 LINGO2-202ENST00000379992 3044 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
NPAS3Q8IXF0 NF1-201ENST00000356175 12362 ntAPPRIS P3 TSL 1 (best) BASIC6.49□□□□□ -1.37
NPAS3Q8IXF0 MCFD2-202ENST00000409105 4210 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
NPAS3Q8IXF0 MUC5AC-201ENST00000621226 17448 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
NPAS3Q8IXF0 MOB4-201ENST00000233892 3785 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
NPAS3Q8IXF0 CCPG1-202ENST00000425574 1945 ntTSL 2 BASIC6.48□□□□□ -1.37
NPAS3Q8IXF0 PTK2-201ENST00000340930 4414 ntTSL 2 BASIC6.48□□□□□ -1.37
NPAS3Q8IXF0 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC6.48□□□□□ -1.37
NPAS3Q8IXF0 SELE-203ENST00000367775 3389 ntTSL 5 BASIC6.48□□□□□ -1.37
NPAS3Q8IXF0 KAT7-203ENST00000435742 3638 ntTSL 2 BASIC6.48□□□□□ -1.37
NPAS3Q8IXF0 CPEB4-202ENST00000334035 6705 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
NPAS3Q8IXF0 MAPK10-270ENST00000641102 3538 ntBASIC6.48□□□□□ -1.37
NPAS3Q8IXF0 AL031656.1-202ENST00000457704 1995 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
NPAS3Q8IXF0 MCTP2-208ENST00000557742 1957 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
NPAS3Q8IXF0 MTPAP-201ENST00000263063 5601 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
NPAS3Q8IXF0 OR52B3P-201ENST00000314715 928 ntBASIC6.48□□□□□ -1.37
NPAS3Q8IXF0 Y_RNA.106-201ENST00000363189 100 ntBASIC6.48□□□□□ -1.37
NPAS3Q8IXF0 RNU6-619P-201ENST00000365146 108 ntBASIC6.48□□□□□ -1.37
NPAS3Q8IXF0 Y_RNA.380-201ENST00000365663 111 ntBASIC6.48□□□□□ -1.37
NPAS3Q8IXF0 RNU6-48P-201ENST00000384161 107 ntBASIC6.48□□□□□ -1.37
NPAS3Q8IXF0 RNU6-1140P-201ENST00000410517 106 ntBASIC6.48□□□□□ -1.37
NPAS3Q8IXF0 AL136133.1-201ENST00000413694 376 ntBASIC6.48□□□□□ -1.37
NPAS3Q8IXF0 UBE2FP1-201ENST00000416536 447 ntBASIC6.48□□□□□ -1.37
NPAS3Q8IXF0 COX6CP17-201ENST00000421389 185 ntBASIC6.48□□□□□ -1.37
NPAS3Q8IXF0 AC137630.2-202ENST00000429681 555 ntTSL 3 BASIC6.48□□□□□ -1.37
NPAS3Q8IXF0 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC6.48□□□□□ -1.37
NPAS3Q8IXF0 LINC01880-201ENST00000446593 561 ntTSL 4 BASIC6.48□□□□□ -1.37
NPAS3Q8IXF0 CCDC13-AS1-202ENST00000446950 554 ntTSL 4 BASIC6.48□□□□□ -1.37
NPAS3Q8IXF0 PRPF38AP1-201ENST00000451976 933 ntBASIC6.48□□□□□ -1.37
NPAS3Q8IXF0 AC079168.1-201ENST00000458741 345 ntBASIC6.48□□□□□ -1.37
NPAS3Q8IXF0 AC011476.1-201ENST00000466725 307 ntBASIC6.48□□□□□ -1.37
NPAS3Q8IXF0 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC6.48□□□□□ -1.37
NPAS3Q8IXF0 SCGB3A2-202ENST00000504320 440 ntTSL 3 BASIC6.48□□□□□ -1.37
NPAS3Q8IXF0 AC010343.2-201ENST00000510162 224 ntBASIC6.48□□□□□ -1.37
NPAS3Q8IXF0 Y_RNA.710-201ENST00000516975 110 ntBASIC6.48□□□□□ -1.37
NPAS3Q8IXF0 RNA5SP135-201ENST00000517019 125 ntBASIC6.48□□□□□ -1.37
NPAS3Q8IXF0 AP000424.2-201ENST00000523784 233 ntTSL 3 BASIC6.48□□□□□ -1.37
NPAS3Q8IXF0 SOX9-AS1-211ENST00000533179 460 ntTSL 3 BASIC6.48□□□□□ -1.37
NPAS3Q8IXF0 AC092490.1-202ENST00000540299 809 ntTSL 3 BASIC6.48□□□□□ -1.37
NPAS3Q8IXF0 AL158058.1-201ENST00000549515 647 ntTSL 2 BASIC6.48□□□□□ -1.37
NPAS3Q8IXF0 INO80-AS1-201ENST00000558967 312 ntTSL 5 BASIC6.48□□□□□ -1.37
NPAS3Q8IXF0 AC005288.1-201ENST00000582842 860 ntTSL 2 BASIC6.48□□□□□ -1.37
NPAS3Q8IXF0 CYCSP1-201ENST00000604815 315 ntBASIC6.48□□□□□ -1.37
NPAS3Q8IXF0 BX664608.1-201ENST00000610519 487 ntBASIC6.48□□□□□ -1.37
NPAS3Q8IXF0 TLR10-207ENST00000613579 3801 ntAPPRIS P1 TSL 3 BASIC6.48□□□□□ -1.37
NPAS3Q8IXF0 AC098657.3-201ENST00000620434 263 ntBASIC6.48□□□□□ -1.37
NPAS3Q8IXF0 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC6.48□□□□□ -1.37
NPAS3Q8IXF0 AL132640.3-201ENST00000630473 177 ntBASIC6.48□□□□□ -1.37
NPAS3Q8IXF0 AC010168.2-201ENST00000562691 5428 ntBASIC6.48□□□□□ -1.37
NPAS3Q8IXF0 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC6.48□□□□□ -1.37
NPAS3Q8IXF0 OR2G6-202ENST00000641501 5840 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
NPAS3Q8IXF0 AC009120.2-204ENST00000621548 2032 ntBASIC6.48□□□□□ -1.37
NPAS3Q8IXF0 VPS39-202ENST00000348544 2661 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
NPAS3Q8IXF0 NCOA2-201ENST00000452400 8447 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
NPAS3Q8IXF0 LRRC37A3-203ENST00000339474 2589 ntTSL 2 BASIC6.48□□□□□ -1.37
NPAS3Q8IXF0 LARP7-210ENST00000509061 2332 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
NPAS3Q8IXF0 HMMR-204ENST00000432118 2084 ntAPPRIS ALT2 TSL 2 BASIC6.48□□□□□ -1.37
NPAS3Q8IXF0 AL049780.3-201ENST00000624612 1583 ntBASIC6.48□□□□□ -1.37
NPAS3Q8IXF0 COX7B-203ENST00000481445 2471 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
NPAS3Q8IXF0 AKAP7-201ENST00000263050 2238 ntTSL 5 BASIC6.48□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 133.5 ms