Protein–RNA interactions for Protein: Q7Z7F7

MRPL55, 39S ribosomal protein L55, mitochondrial, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55Q7Z7F7 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
MRPL55Q7Z7F7 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
MRPL55Q7Z7F7 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
MRPL55Q7Z7F7 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC2.87□□□□□ -1.95
MRPL55Q7Z7F7 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC2.87□□□□□ -1.95
MRPL55Q7Z7F7 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
MRPL55Q7Z7F7 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
MRPL55Q7Z7F7 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
MRPL55Q7Z7F7 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC2.87□□□□□ -1.95
MRPL55Q7Z7F7 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
MRPL55Q7Z7F7 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
MRPL55Q7Z7F7 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC2.87□□□□□ -1.95
MRPL55Q7Z7F7 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC2.86□□□□□ -1.95
MRPL55Q7Z7F7 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
MRPL55Q7Z7F7 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
MRPL55Q7Z7F7 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
MRPL55Q7Z7F7 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC2.86□□□□□ -1.95
MRPL55Q7Z7F7 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
MRPL55Q7Z7F7 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC2.86□□□□□ -1.95
MRPL55Q7Z7F7 AC131971.1-201ENST00000332881 1482 ntBASIC2.86□□□□□ -1.95
MRPL55Q7Z7F7 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
MRPL55Q7Z7F7 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC2.86□□□□□ -1.95
MRPL55Q7Z7F7 AL590240.1-201ENST00000334118 313 ntBASIC2.86□□□□□ -1.95
MRPL55Q7Z7F7 RNA5SP258-201ENST00000362750 119 ntBASIC2.86□□□□□ -1.95
MRPL55Q7Z7F7 RNU1-130P-201ENST00000363930 160 ntBASIC2.86□□□□□ -1.95
MRPL55Q7Z7F7 RNU1-85P-201ENST00000364127 164 ntBASIC2.86□□□□□ -1.95
MRPL55Q7Z7F7 SNORD74.4-201ENST00000364129 80 ntBASIC2.86□□□□□ -1.95
MRPL55Q7Z7F7 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
MRPL55Q7Z7F7 RNU6-837P-201ENST00000391056 108 ntBASIC2.86□□□□□ -1.95
MRPL55Q7Z7F7 AL645927.1-201ENST00000396783 406 ntBASIC2.86□□□□□ -1.95
MRPL55Q7Z7F7 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC2.86□□□□□ -1.95
MRPL55Q7Z7F7 RAD23BP1-201ENST00000421404 1227 ntBASIC2.86□□□□□ -1.95
MRPL55Q7Z7F7 AC004074.1-201ENST00000421810 1063 ntBASIC2.86□□□□□ -1.95
MRPL55Q7Z7F7 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC2.86□□□□□ -1.95
MRPL55Q7Z7F7 MTCO2P1-201ENST00000424648 477 ntBASIC2.86□□□□□ -1.95
MRPL55Q7Z7F7 PRKG1-AS1-202ENST00000426785 1111 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
MRPL55Q7Z7F7 DEFB130D-201ENST00000426866 237 ntBASIC2.86□□□□□ -1.95
MRPL55Q7Z7F7 AC073335.1-201ENST00000427776 363 ntBASIC2.86□□□□□ -1.95
MRPL55Q7Z7F7 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC2.86□□□□□ -1.95
MRPL55Q7Z7F7 FO393414.1-201ENST00000428697 1184 ntBASIC2.86□□□□□ -1.95
MRPL55Q7Z7F7 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC2.86□□□□□ -1.95
MRPL55Q7Z7F7 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC2.86□□□□□ -1.95
MRPL55Q7Z7F7 CEACAMP9-201ENST00000442990 513 ntBASIC2.86□□□□□ -1.95
MRPL55Q7Z7F7 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC2.86□□□□□ -1.95
MRPL55Q7Z7F7 AL096829.2-201ENST00000446582 742 ntBASIC2.86□□□□□ -1.95
MRPL55Q7Z7F7 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC2.86□□□□□ -1.95
MRPL55Q7Z7F7 AC017099.1-201ENST00000448261 1028 ntBASIC2.86□□□□□ -1.95
MRPL55Q7Z7F7 AC012671.1-201ENST00000451912 203 ntBASIC2.86□□□□□ -1.95
MRPL55Q7Z7F7 OR2AF1P-201ENST00000454899 889 ntBASIC2.86□□□□□ -1.95
MRPL55Q7Z7F7 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC2.86□□□□□ -1.95
MRPL55Q7Z7F7 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC2.86□□□□□ -1.95
MRPL55Q7Z7F7 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
MRPL55Q7Z7F7 AC091959.2-201ENST00000477363 321 ntBASIC2.86□□□□□ -1.95
MRPL55Q7Z7F7 AC090013.1-201ENST00000485147 480 ntBASIC2.86□□□□□ -1.95
MRPL55Q7Z7F7 RPL23AP72-201ENST00000492447 435 ntBASIC2.86□□□□□ -1.95
MRPL55Q7Z7F7 MTND4LP2-201ENST00000502312 285 ntBASIC2.86□□□□□ -1.95
MRPL55Q7Z7F7 NDUFB5P1-201ENST00000508134 564 ntBASIC2.86□□□□□ -1.95
MRPL55Q7Z7F7 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC2.86□□□□□ -1.95
MRPL55Q7Z7F7 AC109471.1-201ENST00000511631 612 ntBASIC2.86□□□□□ -1.95
MRPL55Q7Z7F7 AC110775.1-201ENST00000513721 462 ntBASIC2.86□□□□□ -1.95
MRPL55Q7Z7F7 IGKV2D-19-201ENST00000523346 262 ntBASIC2.86□□□□□ -1.95
MRPL55Q7Z7F7 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC2.86□□□□□ -1.95
MRPL55Q7Z7F7 AC069240.1-201ENST00000548774 375 ntBASIC2.86□□□□□ -1.95
MRPL55Q7Z7F7 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC2.86□□□□□ -1.95
MRPL55Q7Z7F7 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC2.86□□□□□ -1.95
MRPL55Q7Z7F7 UBE2FP2-201ENST00000566646 462 ntBASIC2.86□□□□□ -1.95
MRPL55Q7Z7F7 AL513477.2-201ENST00000607858 568 ntBASIC2.86□□□□□ -1.95
MRPL55Q7Z7F7 AL354760.1-201ENST00000608357 643 ntBASIC2.86□□□□□ -1.95
MRPL55Q7Z7F7 AC006023.2-201ENST00000609916 167 ntBASIC2.86□□□□□ -1.95
MRPL55Q7Z7F7 AC016769.4-201ENST00000616893 535 ntBASIC2.86□□□□□ -1.95
MRPL55Q7Z7F7 AC006963.1-201ENST00000624003 1052 ntBASIC2.86□□□□□ -1.95
MRPL55Q7Z7F7 AL356094.1-201ENST00000624663 1212 ntBASIC2.86□□□□□ -1.95
MRPL55Q7Z7F7 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
MRPL55Q7Z7F7 BX649567.1-201ENST00000642071 1134 ntBASIC2.86□□□□□ -1.95
MRPL55Q7Z7F7 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
MRPL55Q7Z7F7 AC125257.1-201ENST00000560400 2930 ntBASIC2.86□□□□□ -1.95
MRPL55Q7Z7F7 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC2.86□□□□□ -1.95
MRPL55Q7Z7F7 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC2.86□□□□□ -1.95
MRPL55Q7Z7F7 LINC00622-201ENST00000562811 1570 ntBASIC2.86□□□□□ -1.95
MRPL55Q7Z7F7 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC2.86□□□□□ -1.95
MRPL55Q7Z7F7 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC2.86□□□□□ -1.95
MRPL55Q7Z7F7 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC2.86□□□□□ -1.95
MRPL55Q7Z7F7 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC2.85□□□□□ -1.95
MRPL55Q7Z7F7 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC2.85□□□□□ -1.95
MRPL55Q7Z7F7 MAPK6PS3-201ENST00000403865 2162 ntBASIC2.85□□□□□ -1.95
MRPL55Q7Z7F7 AL672296.1-201ENST00000427780 2158 ntBASIC2.85□□□□□ -1.95
MRPL55Q7Z7F7 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC2.85□□□□□ -1.95
MRPL55Q7Z7F7 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC2.85□□□□□ -1.95
MRPL55Q7Z7F7 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC2.85□□□□□ -1.95
MRPL55Q7Z7F7 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
MRPL55Q7Z7F7 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC2.85□□□□□ -1.95
MRPL55Q7Z7F7 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC2.85□□□□□ -1.95
MRPL55Q7Z7F7 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC2.85□□□□□ -1.95
MRPL55Q7Z7F7 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
MRPL55Q7Z7F7 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC2.85□□□□□ -1.95
MRPL55Q7Z7F7 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
MRPL55Q7Z7F7 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
MRPL55Q7Z7F7 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC2.85□□□□□ -1.95
MRPL55Q7Z7F7 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC2.85□□□□□ -1.95
MRPL55Q7Z7F7 PRO1804-201ENST00000623780 2050 ntBASIC2.85□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 129.3 ms