Protein–RNA interactions for Protein: Q53GD3

SLC44A4, Choline transporter-like protein 4, humanhuman

Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A4Q53GD3 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
SLC44A4Q53GD3 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC5.08□□□□□ -1.6
SLC44A4Q53GD3 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
SLC44A4Q53GD3 AGR3-202ENST00000402239 563 ntTSL 2 BASIC5.08□□□□□ -1.6
SLC44A4Q53GD3 RPL6P29-201ENST00000414863 865 ntBASIC5.08□□□□□ -1.6
SLC44A4Q53GD3 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC5.08□□□□□ -1.6
SLC44A4Q53GD3 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC5.08□□□□□ -1.6
SLC44A4Q53GD3 AC009237.2-201ENST00000421358 284 ntBASIC5.08□□□□□ -1.6
SLC44A4Q53GD3 EBLN1-201ENST00000422359 1208 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
SLC44A4Q53GD3 AC009965.2-201ENST00000425328 970 ntBASIC5.08□□□□□ -1.6
SLC44A4Q53GD3 RPL37P1-201ENST00000432310 284 ntBASIC5.08□□□□□ -1.6
SLC44A4Q53GD3 RPS25P9-201ENST00000435591 252 ntBASIC5.08□□□□□ -1.6
SLC44A4Q53GD3 AL353706.1-201ENST00000436728 494 ntBASIC5.08□□□□□ -1.6
SLC44A4Q53GD3 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC5.08□□□□□ -1.6
SLC44A4Q53GD3 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC5.08□□□□□ -1.6
SLC44A4Q53GD3 AL034418.1-201ENST00000448675 860 ntBASIC5.08□□□□□ -1.6
SLC44A4Q53GD3 AC010733.1-201ENST00000451515 401 ntBASIC5.08□□□□□ -1.6
SLC44A4Q53GD3 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC5.08□□□□□ -1.6
SLC44A4Q53GD3 NDUFA5P7-201ENST00000452914 242 ntBASIC5.08□□□□□ -1.6
SLC44A4Q53GD3 AC002553.2-201ENST00000453217 340 ntBASIC5.08□□□□□ -1.6
SLC44A4Q53GD3 ACTG1P13-201ENST00000486987 1043 ntBASIC5.08□□□□□ -1.6
SLC44A4Q53GD3 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC5.08□□□□□ -1.6
SLC44A4Q53GD3 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC5.08□□□□□ -1.6
SLC44A4Q53GD3 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC5.08□□□□□ -1.6
SLC44A4Q53GD3 NIFKP7-201ENST00000503365 834 ntBASIC5.08□□□□□ -1.6
SLC44A4Q53GD3 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC5.08□□□□□ -1.6
SLC44A4Q53GD3 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
SLC44A4Q53GD3 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
SLC44A4Q53GD3 TEX12-202ENST00000530752 787 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
SLC44A4Q53GD3 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC5.08□□□□□ -1.6
SLC44A4Q53GD3 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC5.08□□□□□ -1.6
SLC44A4Q53GD3 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC5.08□□□□□ -1.6
SLC44A4Q53GD3 AC123786.2-201ENST00000603459 275 ntBASIC5.08□□□□□ -1.6
SLC44A4Q53GD3 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC5.08□□□□□ -1.6
SLC44A4Q53GD3 AC245297.2-201ENST00000610119 565 ntBASIC5.08□□□□□ -1.6
SLC44A4Q53GD3 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC5.08□□□□□ -1.6
SLC44A4Q53GD3 AC068831.8-201ENST00000620171 435 ntBASIC5.08□□□□□ -1.6
SLC44A4Q53GD3 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC5.08□□□□□ -1.6
SLC44A4Q53GD3 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC5.08□□□□□ -1.6
SLC44A4Q53GD3 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC5.08□□□□□ -1.6
SLC44A4Q53GD3 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC5.08□□□□□ -1.6
SLC44A4Q53GD3 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
SLC44A4Q53GD3 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
SLC44A4Q53GD3 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
SLC44A4Q53GD3 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
SLC44A4Q53GD3 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC5.07□□□□□ -1.6
SLC44A4Q53GD3 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC5.07□□□□□ -1.6
SLC44A4Q53GD3 KLRC1-201ENST00000347831 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
SLC44A4Q53GD3 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
SLC44A4Q53GD3 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
SLC44A4Q53GD3 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
SLC44A4Q53GD3 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
SLC44A4Q53GD3 RNU6-492P-201ENST00000363035 104 ntBASIC5.07□□□□□ -1.6
SLC44A4Q53GD3 Y_RNA.311-201ENST00000365068 96 ntBASIC5.07□□□□□ -1.6
SLC44A4Q53GD3 RNA5SP223-201ENST00000365174 120 ntBASIC5.07□□□□□ -1.6
SLC44A4Q53GD3 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
SLC44A4Q53GD3 TMSB4XP8-201ENST00000402089 135 ntBASIC5.07□□□□□ -1.6
SLC44A4Q53GD3 PRRC2CP1-201ENST00000404428 159 ntBASIC5.07□□□□□ -1.6
SLC44A4Q53GD3 AL021407.1-201ENST00000404531 386 ntBASIC5.07□□□□□ -1.6
SLC44A4Q53GD3 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC5.07□□□□□ -1.6
SLC44A4Q53GD3 AC068533.2-201ENST00000411872 306 ntBASIC5.07□□□□□ -1.6
SLC44A4Q53GD3 TMSB4XP6-201ENST00000415187 135 ntBASIC5.07□□□□□ -1.6
SLC44A4Q53GD3 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC5.07□□□□□ -1.6
SLC44A4Q53GD3 AC099336.2-201ENST00000422457 254 ntBASIC5.07□□□□□ -1.6
SLC44A4Q53GD3 CHIAP3-201ENST00000423668 1133 ntBASIC5.07□□□□□ -1.6
SLC44A4Q53GD3 TMSB4XP1-201ENST00000424567 135 ntBASIC5.07□□□□□ -1.6
SLC44A4Q53GD3 OR2B7P-201ENST00000429302 934 ntBASIC5.07□□□□□ -1.6
SLC44A4Q53GD3 AC009238.2-201ENST00000431026 355 ntBASIC5.07□□□□□ -1.6
SLC44A4Q53GD3 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC5.07□□□□□ -1.6
SLC44A4Q53GD3 AC010881.1-201ENST00000433830 235 ntBASIC5.07□□□□□ -1.6
SLC44A4Q53GD3 YWHAZP8-201ENST00000436935 731 ntBASIC5.07□□□□□ -1.6
SLC44A4Q53GD3 MTCO2P16-201ENST00000436962 677 ntBASIC5.07□□□□□ -1.6
SLC44A4Q53GD3 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC5.07□□□□□ -1.6
SLC44A4Q53GD3 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC5.07□□□□□ -1.6
SLC44A4Q53GD3 CEACAMP6-201ENST00000452007 574 ntBASIC5.07□□□□□ -1.6
SLC44A4Q53GD3 HCG17-214ENST00000453558 732 ntTSL 5 BASIC5.07□□□□□ -1.6
SLC44A4Q53GD3 AC099560.2-201ENST00000457554 255 ntBASIC5.07□□□□□ -1.6
SLC44A4Q53GD3 NCOR1P1-202ENST00000486162 291 ntBASIC5.07□□□□□ -1.6
SLC44A4Q53GD3 AC147055.4-201ENST00000504399 745 ntBASIC5.07□□□□□ -1.6
SLC44A4Q53GD3 AC025674.1-201ENST00000507074 324 ntBASIC5.07□□□□□ -1.6
SLC44A4Q53GD3 XKRY-201ENST00000510392 1100 ntBASIC5.07□□□□□ -1.6
SLC44A4Q53GD3 RPL7L1P13-201ENST00000511702 739 ntBASIC5.07□□□□□ -1.6
SLC44A4Q53GD3 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC5.07□□□□□ -1.6
SLC44A4Q53GD3 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
SLC44A4Q53GD3 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC5.07□□□□□ -1.6
SLC44A4Q53GD3 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC5.07□□□□□ -1.6
SLC44A4Q53GD3 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC5.07□□□□□ -1.6
SLC44A4Q53GD3 AL110118.1-201ENST00000553543 400 ntBASIC5.07□□□□□ -1.6
SLC44A4Q53GD3 AL391156.1-201ENST00000554965 554 ntBASIC5.07□□□□□ -1.6
SLC44A4Q53GD3 AC012213.3-201ENST00000577199 777 ntBASIC5.07□□□□□ -1.6
SLC44A4Q53GD3 MTCYBP13-201ENST00000578634 1093 ntBASIC5.07□□□□□ -1.6
SLC44A4Q53GD3 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC5.07□□□□□ -1.6
SLC44A4Q53GD3 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC5.07□□□□□ -1.6
SLC44A4Q53GD3 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC5.07□□□□□ -1.6
SLC44A4Q53GD3 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC5.07□□□□□ -1.6
SLC44A4Q53GD3 AC020910.2-201ENST00000603635 610 ntBASIC5.07□□□□□ -1.6
SLC44A4Q53GD3 AC080078.2-201ENST00000603766 501 ntBASIC5.07□□□□□ -1.6
SLC44A4Q53GD3 CLPTM1LP1-201ENST00000604519 484 ntBASIC5.07□□□□□ -1.6
SLC44A4Q53GD3 AC010738.1-201ENST00000604970 987 ntBASIC5.07□□□□□ -1.6
SLC44A4Q53GD3 AL008729.2-201ENST00000606393 473 ntBASIC5.07□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 129.4 ms