Protein–RNA interactions for Protein: Q2M1V0

ISX, Intestine-specific homeobox, humanhuman

Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ISXQ2M1V0 U8.11-201ENST00000384699 133 ntBASIC3.82□□□□□ -1.8
ISXQ2M1V0 U8.12-201ENST00000384701 133 ntBASIC3.82□□□□□ -1.8
ISXQ2M1V0 HMGB1P13-201ENST00000406019 642 ntBASIC3.82□□□□□ -1.8
ISXQ2M1V0 SNORA3.3-201ENST00000408712 125 ntBASIC3.82□□□□□ -1.8
ISXQ2M1V0 RNA5SP39-201ENST00000411245 120 ntBASIC3.82□□□□□ -1.8
ISXQ2M1V0 AL138785.1-201ENST00000425821 331 ntBASIC3.82□□□□□ -1.8
ISXQ2M1V0 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC3.82□□□□□ -1.8
ISXQ2M1V0 AC010723.1-201ENST00000435111 540 ntTSL 3 BASIC3.82□□□□□ -1.8
ISXQ2M1V0 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC3.82□□□□□ -1.8
ISXQ2M1V0 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC3.82□□□□□ -1.8
ISXQ2M1V0 TRAPPC13P1-201ENST00000435991 1062 ntBASIC3.82□□□□□ -1.8
ISXQ2M1V0 LINC00412-201ENST00000444744 420 ntTSL 2 BASIC3.82□□□□□ -1.8
ISXQ2M1V0 PDSS1P2-201ENST00000449397 678 ntBASIC3.82□□□□□ -1.8
ISXQ2M1V0 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC3.82□□□□□ -1.8
ISXQ2M1V0 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC3.82□□□□□ -1.8
ISXQ2M1V0 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC3.82□□□□□ -1.8
ISXQ2M1V0 U8.18-201ENST00000459285 133 ntBASIC3.82□□□□□ -1.8
ISXQ2M1V0 LINC02000-201ENST00000483245 640 ntTSL 2 BASIC3.82□□□□□ -1.8
ISXQ2M1V0 DWORF-201ENST00000489090 873 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
ISXQ2M1V0 AC104629.1-201ENST00000494226 508 ntBASIC3.82□□□□□ -1.8
ISXQ2M1V0 AC023050.1-201ENST00000498198 304 ntBASIC3.82□□□□□ -1.8
ISXQ2M1V0 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC3.82□□□□□ -1.8
ISXQ2M1V0 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC3.82□□□□□ -1.8
ISXQ2M1V0 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC3.82□□□□□ -1.8
ISXQ2M1V0 HMGN1P15-201ENST00000513870 295 ntBASIC3.82□□□□□ -1.8
ISXQ2M1V0 RNU7-143P-201ENST00000516781 65 ntBASIC3.82□□□□□ -1.8
ISXQ2M1V0 RNU6-352P-201ENST00000516908 107 ntBASIC3.82□□□□□ -1.8
ISXQ2M1V0 VTA1P2-201ENST00000520205 911 ntBASIC3.82□□□□□ -1.8
ISXQ2M1V0 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC3.82□□□□□ -1.8
ISXQ2M1V0 AC090819.1-201ENST00000523800 1111 ntBASIC3.82□□□□□ -1.8
ISXQ2M1V0 AC004923.2-201ENST00000529649 369 ntBASIC3.82□□□□□ -1.8
ISXQ2M1V0 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
ISXQ2M1V0 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC3.82□□□□□ -1.8
ISXQ2M1V0 AC093014.1-201ENST00000548926 724 ntBASIC3.82□□□□□ -1.8
ISXQ2M1V0 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC3.82□□□□□ -1.8
ISXQ2M1V0 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC3.82□□□□□ -1.8
ISXQ2M1V0 AC012417.1-201ENST00000582307 1039 ntBASIC3.82□□□□□ -1.8
ISXQ2M1V0 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC3.82□□□□□ -1.8
ISXQ2M1V0 SRGNP1-201ENST00000603392 451 ntBASIC3.82□□□□□ -1.8
ISXQ2M1V0 AC007179.3-201ENST00000604976 235 ntBASIC3.82□□□□□ -1.8
ISXQ2M1V0 AC091167.4-201ENST00000605079 184 ntBASIC3.82□□□□□ -1.8
ISXQ2M1V0 AL391497.1-201ENST00000608671 547 ntBASIC3.82□□□□□ -1.8
ISXQ2M1V0 AL163051.2-201ENST00000618976 735 ntBASIC3.82□□□□□ -1.8
ISXQ2M1V0 AC095038.2-201ENST00000621464 1070 ntBASIC3.82□□□□□ -1.8
ISXQ2M1V0 SNHG5-221ENST00000624295 632 ntTSL 5 BASIC3.82□□□□□ -1.8
ISXQ2M1V0 AL358975.1-202ENST00000628133 589 ntTSL 5 BASIC3.82□□□□□ -1.8
ISXQ2M1V0 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC3.82□□□□□ -1.8
ISXQ2M1V0 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
ISXQ2M1V0 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
ISXQ2M1V0 AL031985.3-201ENST00000565390 2449 ntBASIC3.82□□□□□ -1.8
ISXQ2M1V0 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
ISXQ2M1V0 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
ISXQ2M1V0 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC3.81□□□□□ -1.8
ISXQ2M1V0 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
ISXQ2M1V0 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
ISXQ2M1V0 RNA5SP97-201ENST00000365006 84 ntBASIC3.81□□□□□ -1.8
ISXQ2M1V0 HMGB1P10-201ENST00000395823 563 ntBASIC3.81□□□□□ -1.8
ISXQ2M1V0 HMGB3P19-201ENST00000403971 560 ntBASIC3.81□□□□□ -1.8
ISXQ2M1V0 JKAMPP1-201ENST00000413804 919 ntBASIC3.81□□□□□ -1.8
ISXQ2M1V0 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC3.81□□□□□ -1.8
ISXQ2M1V0 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC3.81□□□□□ -1.8
ISXQ2M1V0 Z97055.1-201ENST00000419730 712 ntBASIC3.81□□□□□ -1.8
ISXQ2M1V0 AC092647.1-201ENST00000420654 287 ntBASIC3.81□□□□□ -1.8
ISXQ2M1V0 AC013410.2-201ENST00000422627 201 ntBASIC3.81□□□□□ -1.8
ISXQ2M1V0 AL121882.1-201ENST00000422893 417 ntBASIC3.81□□□□□ -1.8
ISXQ2M1V0 FO393419.3-201ENST00000428741 282 ntBASIC3.81□□□□□ -1.8
ISXQ2M1V0 NANOGP6-201ENST00000429190 847 ntBASIC3.81□□□□□ -1.8
ISXQ2M1V0 AL035458.1-201ENST00000433096 585 ntBASIC3.81□□□□□ -1.8
ISXQ2M1V0 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC3.81□□□□□ -1.8
ISXQ2M1V0 AC024084.1-201ENST00000440744 455 ntTSL 5 BASIC3.81□□□□□ -1.8
ISXQ2M1V0 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC3.81□□□□□ -1.8
ISXQ2M1V0 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC3.81□□□□□ -1.8
ISXQ2M1V0 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC3.81□□□□□ -1.8
ISXQ2M1V0 RPL7P31-201ENST00000450192 724 ntBASIC3.81□□□□□ -1.8
ISXQ2M1V0 PPIAP15-201ENST00000479662 484 ntBASIC3.81□□□□□ -1.8
ISXQ2M1V0 RPL23AP73-201ENST00000492507 471 ntBASIC3.81□□□□□ -1.8
ISXQ2M1V0 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC3.81□□□□□ -1.8
ISXQ2M1V0 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC3.81□□□□□ -1.8
ISXQ2M1V0 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC3.81□□□□□ -1.8
ISXQ2M1V0 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC3.81□□□□□ -1.8
ISXQ2M1V0 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC3.81□□□□□ -1.8
ISXQ2M1V0 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC3.81□□□□□ -1.8
ISXQ2M1V0 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC3.81□□□□□ -1.8
ISXQ2M1V0 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC3.81□□□□□ -1.8
ISXQ2M1V0 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
ISXQ2M1V0 AC008537.2-201ENST00000596135 482 ntTSL 3 BASIC3.81□□□□□ -1.8
ISXQ2M1V0 GXYLT1P5-202ENST00000618830 589 ntTSL 5 BASIC3.81□□□□□ -1.8
ISXQ2M1V0 AC097460.3-201ENST00000623099 442 ntBASIC3.81□□□□□ -1.8
ISXQ2M1V0 AP006248.2-201ENST00000623309 592 ntBASIC3.81□□□□□ -1.8
ISXQ2M1V0 AP003072.4-201ENST00000624580 310 ntBASIC3.81□□□□□ -1.8
ISXQ2M1V0 ZNF90P1-201ENST00000480493 1951 ntBASIC3.81□□□□□ -1.8
ISXQ2M1V0 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC3.81□□□□□ -1.8
ISXQ2M1V0 AL133412.1-201ENST00000380194 2992 ntBASIC3.81□□□□□ -1.8
ISXQ2M1V0 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.81□□□□□ -1.8
ISXQ2M1V0 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC3.8□□□□□ -1.8
ISXQ2M1V0 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
ISXQ2M1V0 AC007529.1-201ENST00000418574 2178 ntBASIC3.8□□□□□ -1.8
ISXQ2M1V0 AL592494.2-201ENST00000425455 1548 ntBASIC3.8□□□□□ -1.8
ISXQ2M1V0 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC3.8□□□□□ -1.8
ISXQ2M1V0 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC3.8□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 138.6 ms