Protein–RNA interactions for Protein: Q15475

SIX1, Homeobox protein SIX1, humanhuman

Predicted RBP Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX1Q15475 MTND2P2-201ENST00000434633 945 ntBASIC3.93□□□□□ -1.78
SIX1Q15475 AL645638.1-201ENST00000440519 361 ntBASIC3.93□□□□□ -1.78
SIX1Q15475 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
SIX1Q15475 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC3.93□□□□□ -1.78
SIX1Q15475 NUTF2P7-201ENST00000453086 375 ntBASIC3.93□□□□□ -1.78
SIX1Q15475 MTCO3P20-201ENST00000454926 688 ntBASIC3.93□□□□□ -1.78
SIX1Q15475 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC3.93□□□□□ -1.78
SIX1Q15475 PPIAP15-201ENST00000479662 484 ntBASIC3.93□□□□□ -1.78
SIX1Q15475 LINC02000-201ENST00000483245 640 ntTSL 2 BASIC3.93□□□□□ -1.78
SIX1Q15475 RPS3AP6-201ENST00000484430 795 ntBASIC3.93□□□□□ -1.78
SIX1Q15475 DWORF-201ENST00000489090 873 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
SIX1Q15475 MRPL49P2-201ENST00000521066 465 ntBASIC3.93□□□□□ -1.78
SIX1Q15475 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC3.93□□□□□ -1.78
SIX1Q15475 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC3.93□□□□□ -1.78
SIX1Q15475 AC007224.1-201ENST00000564410 144 ntBASIC3.93□□□□□ -1.78
SIX1Q15475 AC018371.1-201ENST00000584560 640 ntTSL 3 BASIC3.93□□□□□ -1.78
SIX1Q15475 AP001542.3-201ENST00000587619 527 ntTSL 5 BASIC3.93□□□□□ -1.78
SIX1Q15475 AC006946.3-201ENST00000609791 756 ntBASIC3.93□□□□□ -1.78
SIX1Q15475 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC3.93□□□□□ -1.78
SIX1Q15475 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC3.93□□□□□ -1.78
SIX1Q15475 OR5H6-201ENST00000615035 1113 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
SIX1Q15475 AL512427.1-201ENST00000618593 349 ntBASIC3.93□□□□□ -1.78
SIX1Q15475 AC090506.2-201ENST00000624521 419 ntBASIC3.93□□□□□ -1.78
SIX1Q15475 AC099654.9-201ENST00000637055 678 ntBASIC3.93□□□□□ -1.78
SIX1Q15475 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
SIX1Q15475 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC3.93□□□□□ -1.78
SIX1Q15475 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC3.93□□□□□ -1.78
SIX1Q15475 AC093311.1-201ENST00000506586 2021 ntBASIC3.93□□□□□ -1.78
SIX1Q15475 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
SIX1Q15475 RGS1-201ENST00000367459 1405 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
SIX1Q15475 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC3.93□□□□□ -1.78
SIX1Q15475 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC3.93□□□□□ -1.78
SIX1Q15475 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
SIX1Q15475 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
SIX1Q15475 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
SIX1Q15475 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC3.92□□□□□ -1.78
SIX1Q15475 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC3.92□□□□□ -1.78
SIX1Q15475 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC3.92□□□□□ -1.78
SIX1Q15475 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
SIX1Q15475 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC3.92□□□□□ -1.78
SIX1Q15475 OR52B1P-201ENST00000316506 909 ntBASIC3.92□□□□□ -1.78
SIX1Q15475 MIR423-201ENST00000362201 94 ntBASIC3.92□□□□□ -1.78
SIX1Q15475 RNA5SP502-201ENST00000362694 119 ntBASIC3.92□□□□□ -1.78
SIX1Q15475 SNORA72.3-201ENST00000365074 132 ntBASIC3.92□□□□□ -1.78
SIX1Q15475 U1.1-201ENST00000384101 164 ntBASIC3.92□□□□□ -1.78
SIX1Q15475 MIR1193-201ENST00000408109 78 ntBASIC3.92□□□□□ -1.78
SIX1Q15475 RN7SKP263-201ENST00000411194 309 ntBASIC3.92□□□□□ -1.78
SIX1Q15475 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC3.92□□□□□ -1.78
SIX1Q15475 LINC01752-201ENST00000417299 438 ntTSL 2 BASIC3.92□□□□□ -1.78
SIX1Q15475 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC3.92□□□□□ -1.78
SIX1Q15475 AC073310.1-201ENST00000423226 1033 ntBASIC3.92□□□□□ -1.78
SIX1Q15475 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC3.92□□□□□ -1.78
SIX1Q15475 LINC00376-201ENST00000439454 693 ntTSL 5 BASIC3.92□□□□□ -1.78
SIX1Q15475 AC104653.1-202ENST00000446401 390 ntTSL 3 BASIC3.92□□□□□ -1.78
SIX1Q15475 AC114755.5-201ENST00000447760 831 ntBASIC3.92□□□□□ -1.78
SIX1Q15475 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC3.92□□□□□ -1.78
SIX1Q15475 AL096803.2-201ENST00000450032 677 ntBASIC3.92□□□□□ -1.78
SIX1Q15475 DNAJC19P1-201ENST00000455312 319 ntBASIC3.92□□□□□ -1.78
SIX1Q15475 RPL21P11-201ENST00000461458 483 ntBASIC3.92□□□□□ -1.78
SIX1Q15475 HMGB1P38-201ENST00000490557 577 ntBASIC3.92□□□□□ -1.78
SIX1Q15475 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC3.92□□□□□ -1.78
SIX1Q15475 AC069306.1-201ENST00000507006 843 ntBASIC3.92□□□□□ -1.78
SIX1Q15475 RN7SKP21-201ENST00000516503 220 ntBASIC3.92□□□□□ -1.78
SIX1Q15475 SCARNA14-201ENST00000516903 136 ntBASIC3.92□□□□□ -1.78
SIX1Q15475 RNU6-352P-201ENST00000516908 107 ntBASIC3.92□□□□□ -1.78
SIX1Q15475 OR5AK3P-201ENST00000527486 1297 ntBASIC3.92□□□□□ -1.78
SIX1Q15475 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC3.92□□□□□ -1.78
SIX1Q15475 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC3.92□□□□□ -1.78
SIX1Q15475 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC3.92□□□□□ -1.78
SIX1Q15475 MIR548Y-201ENST00000582739 110 ntBASIC3.92□□□□□ -1.78
SIX1Q15475 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC3.92□□□□□ -1.78
SIX1Q15475 AC090912.3-201ENST00000609775 533 ntBASIC3.92□□□□□ -1.78
SIX1Q15475 RNU6-1192P-201ENST00000612197 107 ntBASIC3.92□□□□□ -1.78
SIX1Q15475 RNU6-489P-201ENST00000618289 107 ntBASIC3.92□□□□□ -1.78
SIX1Q15475 AP003485.1-201ENST00000625093 753 ntBASIC3.92□□□□□ -1.78
SIX1Q15475 OR4G3P-201ENST00000633500 913 ntBASIC3.92□□□□□ -1.78
SIX1Q15475 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
SIX1Q15475 MIR492-201ENST00000638676 116 ntBASIC3.92□□□□□ -1.78
SIX1Q15475 OR6C71P-202ENST00000641886 1107 ntBASIC3.92□□□□□ -1.78
SIX1Q15475 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
SIX1Q15475 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC3.92□□□□□ -1.78
SIX1Q15475 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
SIX1Q15475 AC073073.2-201ENST00000609827 2578 ntBASIC3.92□□□□□ -1.78
SIX1Q15475 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC3.92□□□□□ -1.78
SIX1Q15475 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
SIX1Q15475 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
SIX1Q15475 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
SIX1Q15475 HSPA8P17-201ENST00000427029 1382 ntBASIC3.91□□□□□ -1.78
SIX1Q15475 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC3.91□□□□□ -1.78
SIX1Q15475 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
SIX1Q15475 HSPA8P1-201ENST00000425843 1833 ntBASIC3.91□□□□□ -1.78
SIX1Q15475 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
SIX1Q15475 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
SIX1Q15475 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC3.91□□□□□ -1.78
SIX1Q15475 CREM-201ENST00000337656 900 ntAPPRIS ALT1 TSL 5 BASIC3.91□□□□□ -1.78
SIX1Q15475 RNU5B-4P-201ENST00000363508 111 ntBASIC3.91□□□□□ -1.78
SIX1Q15475 RNU6-225P-201ENST00000384613 103 ntBASIC3.91□□□□□ -1.78
SIX1Q15475 AL512430.2-201ENST00000406786 339 ntBASIC3.91□□□□□ -1.78
SIX1Q15475 Z98941.1-201ENST00000407764 100 ntBASIC3.91□□□□□ -1.78
SIX1Q15475 AC096533.1-201ENST00000411645 353 ntBASIC3.91□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 87.9 ms