Protein–RNA interactions for Protein: Q01118

SCN7A, Sodium channel protein type 7 subunit alpha, humanhuman

Predictions only

Length 1,682 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN7AQ01118 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC4.11□□□□□ -1.75
SCN7AQ01118 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC4.11□□□□□ -1.75
SCN7AQ01118 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC4.11□□□□□ -1.75
SCN7AQ01118 AC005828.3-201ENST00000583552 591 ntTSL 5 BASIC4.11□□□□□ -1.75
SCN7AQ01118 uc_338.25-201ENST00000613756 156 ntBASIC4.11□□□□□ -1.75
SCN7AQ01118 RDM1-219ENST00000615378 542 ntTSL 3 BASIC4.11□□□□□ -1.75
SCN7AQ01118 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
SCN7AQ01118 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
SCN7AQ01118 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
SCN7AQ01118 HSPA8P17-201ENST00000427029 1382 ntBASIC4.11□□□□□ -1.75
SCN7AQ01118 BCLAF1P1-201ENST00000505813 2752 ntBASIC4.11□□□□□ -1.75
SCN7AQ01118 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
SCN7AQ01118 CR383658.2-201ENST00000547576 1525 ntBASIC4.1□□□□□ -1.75
SCN7AQ01118 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
SCN7AQ01118 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC4.1□□□□□ -1.75
SCN7AQ01118 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC4.1□□□□□ -1.75
SCN7AQ01118 AL139002.1-201ENST00000435281 902 ntTSL 5 BASIC4.1□□□□□ -1.75
SCN7AQ01118 MTND2P25-201ENST00000449028 610 ntBASIC4.1□□□□□ -1.75
SCN7AQ01118 CCRL1P1-201ENST00000449542 1053 ntBASIC4.1□□□□□ -1.75
SCN7AQ01118 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC4.1□□□□□ -1.75
SCN7AQ01118 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC4.1□□□□□ -1.75
SCN7AQ01118 AC099489.2-201ENST00000574976 260 ntBASIC4.1□□□□□ -1.75
SCN7AQ01118 CASC15-208ENST00000636388 1174 ntTSL 5 BASIC4.1□□□□□ -1.75
SCN7AQ01118 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
SCN7AQ01118 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC4.1□□□□□ -1.75
SCN7AQ01118 AL645568.2-201ENST00000432815 1337 ntBASIC4.1□□□□□ -1.75
SCN7AQ01118 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC4.1□□□□□ -1.75
SCN7AQ01118 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC4.1□□□□□ -1.75
SCN7AQ01118 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC4.1□□□□□ -1.75
SCN7AQ01118 LINC01378-201ENST00000422145 2516 ntTSL 3 BASIC4.1□□□□□ -1.75
SCN7AQ01118 AC073325.2-201ENST00000339545 159 ntBASIC4.1□□□□□ -1.75
SCN7AQ01118 AC093719.1-202ENST00000392735 373 ntBASIC4.1□□□□□ -1.75
SCN7AQ01118 AC012065.2-201ENST00000421295 375 ntBASIC4.1□□□□□ -1.75
SCN7AQ01118 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC4.1□□□□□ -1.75
SCN7AQ01118 AC138409.2-202ENST00000507274 458 ntBASIC4.1□□□□□ -1.75
SCN7AQ01118 RNU4ATAC17P-201ENST00000517272 120 ntBASIC4.1□□□□□ -1.75
SCN7AQ01118 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC4.1□□□□□ -1.75
SCN7AQ01118 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC4.1□□□□□ -1.75
SCN7AQ01118 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC4.1□□□□□ -1.75
SCN7AQ01118 AC006504.3-201ENST00000586818 523 ntBASIC4.1□□□□□ -1.75
SCN7AQ01118 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC4.1□□□□□ -1.75
SCN7AQ01118 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC4.1□□□□□ -1.75
SCN7AQ01118 BNIP3P38-201ENST00000601117 544 ntBASIC4.1□□□□□ -1.75
SCN7AQ01118 HMGB1P50-201ENST00000605814 607 ntBASIC4.1□□□□□ -1.75
SCN7AQ01118 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC4.09□□□□□ -1.75
SCN7AQ01118 AC005332.5-201ENST00000591222 2919 ntBASIC4.09□□□□□ -1.75
SCN7AQ01118 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC4.09□□□□□ -1.75
SCN7AQ01118 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
SCN7AQ01118 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
SCN7AQ01118 GSTA1-201ENST00000334575 1019 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
SCN7AQ01118 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC4.09□□□□□ -1.76
SCN7AQ01118 SNORA80A-201ENST00000363922 136 ntBASIC4.09□□□□□ -1.76
SCN7AQ01118 RNU6-729P-201ENST00000384399 107 ntBASIC4.09□□□□□ -1.76
SCN7AQ01118 RNU1-89P-201ENST00000384592 164 ntBASIC4.09□□□□□ -1.76
SCN7AQ01118 USP9YP36-201ENST00000424581 829 ntBASIC4.09□□□□□ -1.76
SCN7AQ01118 USP9YP31-201ENST00000431405 881 ntBASIC4.09□□□□□ -1.76
SCN7AQ01118 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC4.09□□□□□ -1.76
SCN7AQ01118 AC006028.1-201ENST00000438379 402 ntBASIC4.09□□□□□ -1.76
SCN7AQ01118 AL357552.1-201ENST00000445254 415 ntBASIC4.09□□□□□ -1.76
SCN7AQ01118 RPS27AP1-201ENST00000475545 471 ntBASIC4.09□□□□□ -1.76
SCN7AQ01118 RPS3AP43-201ENST00000479743 781 ntBASIC4.09□□□□□ -1.76
SCN7AQ01118 AC091860.2-201ENST00000509423 941 ntTSL 2 BASIC4.09□□□□□ -1.76
SCN7AQ01118 AC091826.1-201ENST00000514065 313 ntBASIC4.09□□□□□ -1.76
SCN7AQ01118 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC4.09□□□□□ -1.76
SCN7AQ01118 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC4.09□□□□□ -1.76
SCN7AQ01118 HAUS1-203ENST00000585518 506 ntTSL 5 BASIC4.09□□□□□ -1.76
SCN7AQ01118 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC4.09□□□□□ -1.76
SCN7AQ01118 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC4.09□□□□□ -1.76
SCN7AQ01118 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
SCN7AQ01118 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC4.08□□□□□ -1.76
SCN7AQ01118 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
SCN7AQ01118 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
SCN7AQ01118 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
SCN7AQ01118 AL136116.1-201ENST00000403591 381 ntBASIC4.08□□□□□ -1.76
SCN7AQ01118 AC008065.1-201ENST00000428525 348 ntBASIC4.08□□□□□ -1.76
SCN7AQ01118 AL121970.1-201ENST00000447557 929 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
SCN7AQ01118 AC068724.1-201ENST00000487100 792 ntBASIC4.08□□□□□ -1.76
SCN7AQ01118 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC4.08□□□□□ -1.76
SCN7AQ01118 LINC02505-203ENST00000515128 756 ntTSL 5 BASIC4.08□□□□□ -1.76
SCN7AQ01118 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC4.08□□□□□ -1.76
SCN7AQ01118 AC113192.3-201ENST00000529152 742 ntBASIC4.08□□□□□ -1.76
SCN7AQ01118 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC4.08□□□□□ -1.76
SCN7AQ01118 AC006023.1-201ENST00000603944 259 ntBASIC4.08□□□□□ -1.76
SCN7AQ01118 AC110801.1-201ENST00000623590 212 ntBASIC4.08□□□□□ -1.76
SCN7AQ01118 AC017071.1-201ENST00000564407 2204 ntBASIC4.08□□□□□ -1.76
SCN7AQ01118 AC007390.2-201ENST00000606229 3803 ntBASIC4.08□□□□□ -1.76
SCN7AQ01118 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC4.08□□□□□ -1.76
SCN7AQ01118 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
SCN7AQ01118 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC4.08□□□□□ -1.76
SCN7AQ01118 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
SCN7AQ01118 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC4.07□□□□□ -1.76
SCN7AQ01118 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC4.07□□□□□ -1.76
SCN7AQ01118 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
SCN7AQ01118 IARS-201ENST00000375627 697 ntTSL 3 BASIC4.07□□□□□ -1.76
SCN7AQ01118 GCNT6-201ENST00000379591 934 ntBASIC4.07□□□□□ -1.76
SCN7AQ01118 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC4.07□□□□□ -1.76
SCN7AQ01118 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC4.07□□□□□ -1.76
SCN7AQ01118 ACTG1P13-201ENST00000486987 1043 ntBASIC4.07□□□□□ -1.76
SCN7AQ01118 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC4.07□□□□□ -1.76
SCN7AQ01118 PSMA2P1-201ENST00000526365 646 ntBASIC4.07□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 94.7 ms