Protein–RNA interactions for Protein: P63316

TNNC1, Troponin C, slow skeletal and cardiac muscles, humanhuman

Predictions only

Length 161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNNC1P63316 AC116563.2-201ENST00000624751 535 ntBASIC3.94□□□□□ -1.78
TNNC1P63316 CD36-221ENST00000534394 1741 ntTSL 2 BASIC3.94□□□□□ -1.78
TNNC1P63316 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.94□□□□□ -1.78
TNNC1P63316 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC3.94□□□□□ -1.78
TNNC1P63316 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
TNNC1P63316 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
TNNC1P63316 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
TNNC1P63316 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC3.93□□□□□ -1.78
TNNC1P63316 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
TNNC1P63316 AC138393.1-206ENST00000540997 1886 ntBASIC3.93□□□□□ -1.78
TNNC1P63316 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
TNNC1P63316 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC3.93□□□□□ -1.78
TNNC1P63316 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC3.93□□□□□ -1.78
TNNC1P63316 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC3.93□□□□□ -1.78
TNNC1P63316 PTMAP2-201ENST00000397627 327 ntBASIC3.93□□□□□ -1.78
TNNC1P63316 RAB9AP3-201ENST00000412737 573 ntBASIC3.93□□□□□ -1.78
TNNC1P63316 AL691447.1-201ENST00000419456 387 ntBASIC3.93□□□□□ -1.78
TNNC1P63316 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC3.93□□□□□ -1.78
TNNC1P63316 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
TNNC1P63316 RAB9AP1-201ENST00000449393 573 ntBASIC3.93□□□□□ -1.78
TNNC1P63316 C1DP3-201ENST00000455013 423 ntBASIC3.93□□□□□ -1.78
TNNC1P63316 SNORA84-201ENST00000459229 133 ntBASIC3.93□□□□□ -1.78
TNNC1P63316 EIF2S2P4-201ENST00000461070 984 ntBASIC3.93□□□□□ -1.78
TNNC1P63316 RPS3AP50-201ENST00000487064 803 ntBASIC3.93□□□□□ -1.78
TNNC1P63316 RPL23AP73-201ENST00000492507 471 ntBASIC3.93□□□□□ -1.78
TNNC1P63316 AC117525.1-201ENST00000515228 503 ntBASIC3.93□□□□□ -1.78
TNNC1P63316 RNU1-95P-201ENST00000516357 160 ntBASIC3.93□□□□□ -1.78
TNNC1P63316 RNU1-128P-201ENST00000516704 160 ntBASIC3.93□□□□□ -1.78
TNNC1P63316 HMGB1P23-201ENST00000518743 568 ntBASIC3.93□□□□□ -1.78
TNNC1P63316 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC3.93□□□□□ -1.78
TNNC1P63316 CASP1-216ENST00000534497 825 ntTSL 5 BASIC3.93□□□□□ -1.78
TNNC1P63316 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC3.93□□□□□ -1.78
TNNC1P63316 SNHG1-205ENST00000537869 1038 ntTSL 3 BASIC3.93□□□□□ -1.78
TNNC1P63316 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC3.93□□□□□ -1.78
TNNC1P63316 LINC00911-201ENST00000555272 546 ntTSL 2 BASIC3.93□□□□□ -1.78
TNNC1P63316 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC3.93□□□□□ -1.78
TNNC1P63316 AC009558.2-201ENST00000558258 396 ntTSL 2 BASIC3.93□□□□□ -1.78
TNNC1P63316 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC3.93□□□□□ -1.78
TNNC1P63316 AC115621.1-201ENST00000604653 858 ntBASIC3.93□□□□□ -1.78
TNNC1P63316 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
TNNC1P63316 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.93□□□□□ -1.78
TNNC1P63316 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC3.93□□□□□ -1.78
TNNC1P63316 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC3.93□□□□□ -1.78
TNNC1P63316 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.92□□□□□ -1.78
TNNC1P63316 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
TNNC1P63316 RNF6P1-201ENST00000444889 1784 ntBASIC3.92□□□□□ -1.78
TNNC1P63316 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.92□□□□□ -1.78
TNNC1P63316 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.92□□□□□ -1.78
TNNC1P63316 RNA5SP51-201ENST00000364750 119 ntBASIC3.92□□□□□ -1.78
TNNC1P63316 SNORA5A-201ENST00000384111 134 ntBASIC3.92□□□□□ -1.78
TNNC1P63316 RN7SKP285-201ENST00000410137 318 ntBASIC3.92□□□□□ -1.78
TNNC1P63316 ATP5A1P2-201ENST00000412323 255 ntBASIC3.92□□□□□ -1.78
TNNC1P63316 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC3.92□□□□□ -1.78
TNNC1P63316 PCBP2P3-201ENST00000509726 843 ntBASIC3.92□□□□□ -1.78
TNNC1P63316 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC3.92□□□□□ -1.78
TNNC1P63316 ACTR6P1-201ENST00000514311 1104 ntBASIC3.92□□□□□ -1.78
TNNC1P63316 RN7SKP18-201ENST00000516005 275 ntBASIC3.92□□□□□ -1.78
TNNC1P63316 RN7SKP60-201ENST00000516985 239 ntBASIC3.92□□□□□ -1.78
TNNC1P63316 RNU6-1231P-201ENST00000517185 103 ntBASIC3.92□□□□□ -1.78
TNNC1P63316 AL139174.1-201ENST00000531489 886 ntBASIC3.92□□□□□ -1.78
TNNC1P63316 GTF2IP22-201ENST00000554443 182 ntBASIC3.92□□□□□ -1.78
TNNC1P63316 AC009101.1-201ENST00000568135 242 ntBASIC3.92□□□□□ -1.78
TNNC1P63316 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC3.92□□□□□ -1.78
TNNC1P63316 AL355816.1-201ENST00000607951 118 ntBASIC3.92□□□□□ -1.78
TNNC1P63316 AC119674.1-207ENST00000641355 633 ntBASIC3.92□□□□□ -1.78
TNNC1P63316 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.92□□□□□ -1.78
TNNC1P63316 KMT2E-216ENST00000622386 1588 ntTSL 5 BASIC3.92□□□□□ -1.78
TNNC1P63316 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC3.91□□□□□ -1.78
TNNC1P63316 AC025125.1-201ENST00000624743 1922 ntBASIC3.91□□□□□ -1.78
TNNC1P63316 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
TNNC1P63316 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC3.91□□□□□ -1.78
TNNC1P63316 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC3.91□□□□□ -1.78
TNNC1P63316 U3.15-201ENST00000365398 212 ntBASIC3.91□□□□□ -1.78
TNNC1P63316 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
TNNC1P63316 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
TNNC1P63316 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
TNNC1P63316 RNA5SP498-201ENST00000411342 120 ntBASIC3.91□□□□□ -1.78
TNNC1P63316 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC3.91□□□□□ -1.78
TNNC1P63316 NDUFB1P1-201ENST00000435191 180 ntBASIC3.91□□□□□ -1.78
TNNC1P63316 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC3.91□□□□□ -1.78
TNNC1P63316 AC239367.2-201ENST00000447309 705 ntBASIC3.91□□□□□ -1.78
TNNC1P63316 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC3.91□□□□□ -1.78
TNNC1P63316 SUN3-208ENST00000453192 801 ntTSL 5 BASIC3.91□□□□□ -1.78
TNNC1P63316 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC3.91□□□□□ -1.78
TNNC1P63316 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC3.91□□□□□ -1.78
TNNC1P63316 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC3.91□□□□□ -1.78
TNNC1P63316 AP001180.3-201ENST00000582221 145 ntBASIC3.91□□□□□ -1.78
TNNC1P63316 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC3.91□□□□□ -1.78
TNNC1P63316 LINC00458-206ENST00000607494 849 ntTSL 3 BASIC3.91□□□□□ -1.78
TNNC1P63316 RMST_8.1-201ENST00000610287 165 ntBASIC3.91□□□□□ -1.78
TNNC1P63316 AC019080.5-201ENST00000624891 757 ntBASIC3.91□□□□□ -1.78
TNNC1P63316 AC012442.3-202ENST00000636742 206 ntBASIC3.91□□□□□ -1.78
TNNC1P63316 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC3.91□□□□□ -1.78
TNNC1P63316 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
TNNC1P63316 USP44-208ENST00000552440 1818 ntTSL 5 BASIC3.91□□□□□ -1.78
TNNC1P63316 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.9□□□□□ -1.78
TNNC1P63316 TNPO1P3-201ENST00000436471 2662 ntBASIC3.9□□□□□ -1.78
TNNC1P63316 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
TNNC1P63316 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
TNNC1P63316 MFSD8-236ENST00000641509 4050 ntBASIC3.9□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 100.3 ms