Protein–RNA interactions for Protein: P60507

ERVFC1, Endogenous retrovirus group FC1 Env polyprotein, humanhuman

Predictions only

Length 584 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERVFC1P60507 VCAM1-201ENST00000294728 3083 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
ERVFC1P60507 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
ERVFC1P60507 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC5.71□□□□□ -1.5
ERVFC1P60507 AC012618.3-205ENST00000637896 1496 ntBASIC5.71□□□□□ -1.5
ERVFC1P60507 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC5.7□□□□□ -1.5
ERVFC1P60507 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC5.7□□□□□ -1.5
ERVFC1P60507 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
ERVFC1P60507 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
ERVFC1P60507 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
ERVFC1P60507 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
ERVFC1P60507 MGP-201ENST00000228938 694 ntTSL 3 BASIC5.7□□□□□ -1.5
ERVFC1P60507 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
ERVFC1P60507 Y_RNA.1-201ENST00000352915 104 ntBASIC5.7□□□□□ -1.5
ERVFC1P60507 RNU6-845P-201ENST00000362578 103 ntBASIC5.7□□□□□ -1.5
ERVFC1P60507 RNU6-216P-201ENST00000363282 104 ntBASIC5.7□□□□□ -1.5
ERVFC1P60507 TMSB4XP8-201ENST00000402089 135 ntBASIC5.7□□□□□ -1.5
ERVFC1P60507 FAR2P2-201ENST00000413041 594 ntBASIC5.7□□□□□ -1.5
ERVFC1P60507 VN1R36P-201ENST00000414936 291 ntBASIC5.7□□□□□ -1.5
ERVFC1P60507 TMSB4XP6-201ENST00000415187 135 ntBASIC5.7□□□□□ -1.5
ERVFC1P60507 ATP6V1G1P7-201ENST00000415853 349 ntBASIC5.7□□□□□ -1.5
ERVFC1P60507 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC5.7□□□□□ -1.5
ERVFC1P60507 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC5.7□□□□□ -1.5
ERVFC1P60507 TMSB4XP1-201ENST00000424567 135 ntBASIC5.7□□□□□ -1.5
ERVFC1P60507 FAR2P4-202ENST00000425399 584 ntBASIC5.7□□□□□ -1.5
ERVFC1P60507 AL513175.1-201ENST00000431492 780 ntBASIC5.7□□□□□ -1.5
ERVFC1P60507 USP24P1-201ENST00000433802 779 ntBASIC5.7□□□□□ -1.5
ERVFC1P60507 ACTR3P2-201ENST00000439585 1257 ntBASIC5.7□□□□□ -1.5
ERVFC1P60507 USP9YP15-201ENST00000442391 422 ntBASIC5.7□□□□□ -1.5
ERVFC1P60507 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC5.7□□□□□ -1.5
ERVFC1P60507 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC5.7□□□□□ -1.5
ERVFC1P60507 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC5.7□□□□□ -1.5
ERVFC1P60507 RPL18AP17-201ENST00000455326 198 ntBASIC5.7□□□□□ -1.5
ERVFC1P60507 RPS29P33-201ENST00000456717 146 ntBASIC5.7□□□□□ -1.5
ERVFC1P60507 AC098583.1-201ENST00000480875 255 ntBASIC5.7□□□□□ -1.5
ERVFC1P60507 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
ERVFC1P60507 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC5.7□□□□□ -1.5
ERVFC1P60507 AC114981.1-201ENST00000503897 678 ntBASIC5.7□□□□□ -1.5
ERVFC1P60507 AF131216.2-201ENST00000512316 564 ntBASIC5.7□□□□□ -1.5
ERVFC1P60507 EIF3KP3-201ENST00000514461 639 ntBASIC5.7□□□□□ -1.5
ERVFC1P60507 UBE2Q2P10-201ENST00000514854 900 ntBASIC5.7□□□□□ -1.5
ERVFC1P60507 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC5.7□□□□□ -1.5
ERVFC1P60507 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC5.7□□□□□ -1.5
ERVFC1P60507 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC5.7□□□□□ -1.5
ERVFC1P60507 HSPA8P13-201ENST00000523715 472 ntBASIC5.7□□□□□ -1.5
ERVFC1P60507 OR4A12P-201ENST00000530847 918 ntBASIC5.7□□□□□ -1.5
ERVFC1P60507 AP001804.2-201ENST00000533932 910 ntBASIC5.7□□□□□ -1.5
ERVFC1P60507 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC5.7□□□□□ -1.5
ERVFC1P60507 AC007151.1-201ENST00000572774 483 ntBASIC5.7□□□□□ -1.5
ERVFC1P60507 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC5.7□□□□□ -1.5
ERVFC1P60507 FAM106CP-201ENST00000582212 507 ntBASIC5.7□□□□□ -1.5
ERVFC1P60507 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC5.7□□□□□ -1.5
ERVFC1P60507 PRELID3BP8-201ENST00000604148 295 ntBASIC5.7□□□□□ -1.5
ERVFC1P60507 AC115286.1-201ENST00000604298 434 ntBASIC5.7□□□□□ -1.5
ERVFC1P60507 AC104010.1-201ENST00000616889 150 ntBASIC5.7□□□□□ -1.5
ERVFC1P60507 AC079684.1-201ENST00000621405 437 ntBASIC5.7□□□□□ -1.5
ERVFC1P60507 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC5.7□□□□□ -1.5
ERVFC1P60507 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
ERVFC1P60507 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
ERVFC1P60507 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
ERVFC1P60507 FAM197Y6-202ENST00000442145 2340 ntTSL 2 BASIC5.7□□□□□ -1.5
ERVFC1P60507 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC5.7□□□□□ -1.5
ERVFC1P60507 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC5.7□□□□□ -1.5
ERVFC1P60507 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
ERVFC1P60507 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC5.7□□□□□ -1.5
ERVFC1P60507 INTS6P1-201ENST00000504674 2530 ntBASIC5.7□□□□□ -1.5
ERVFC1P60507 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
ERVFC1P60507 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC5.69□□□□□ -1.5
ERVFC1P60507 PANDAR-201ENST00000629595 1506 ntBASIC5.69□□□□□ -1.5
ERVFC1P60507 OR2AT4-204ENST00000641593 8733 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
ERVFC1P60507 AC021242.1-201ENST00000507315 2035 ntBASIC5.69□□□□□ -1.5
ERVFC1P60507 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC5.69□□□□□ -1.5
ERVFC1P60507 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC5.69□□□□□ -1.5
ERVFC1P60507 DBF4P1-201ENST00000412976 1892 ntBASIC5.69□□□□□ -1.5
ERVFC1P60507 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
ERVFC1P60507 ZPLD1-201ENST00000306176 3619 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
ERVFC1P60507 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
ERVFC1P60507 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC5.69□□□□□ -1.5
ERVFC1P60507 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
ERVFC1P60507 SNURFL-201ENST00000309296 343 ntBASIC5.69□□□□□ -1.5
ERVFC1P60507 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC5.69□□□□□ -1.5
ERVFC1P60507 RNU6-98P-201ENST00000384173 107 ntBASIC5.69□□□□□ -1.5
ERVFC1P60507 MIR141-201ENST00000384975 95 ntBASIC5.69□□□□□ -1.5
ERVFC1P60507 Z97832.1-201ENST00000402490 328 ntBASIC5.69□□□□□ -1.5
ERVFC1P60507 RNA5SP118-201ENST00000410385 109 ntBASIC5.69□□□□□ -1.5
ERVFC1P60507 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC5.69□□□□□ -1.5
ERVFC1P60507 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC5.69□□□□□ -1.5
ERVFC1P60507 SDCBPP2-201ENST00000424643 885 ntBASIC5.69□□□□□ -1.5
ERVFC1P60507 RPL7P56-201ENST00000429441 717 ntBASIC5.69□□□□□ -1.5
ERVFC1P60507 AL358934.1-201ENST00000432346 324 ntBASIC5.69□□□□□ -1.5
ERVFC1P60507 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC5.69□□□□□ -1.5
ERVFC1P60507 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC5.69□□□□□ -1.5
ERVFC1P60507 RPL21P110-201ENST00000433345 446 ntBASIC5.69□□□□□ -1.5
ERVFC1P60507 BMS1P19-201ENST00000433925 393 ntBASIC5.69□□□□□ -1.5
ERVFC1P60507 SDCBPP1-201ENST00000440192 890 ntBASIC5.69□□□□□ -1.5
ERVFC1P60507 HMGB3P9-201ENST00000441799 583 ntBASIC5.69□□□□□ -1.5
ERVFC1P60507 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC5.69□□□□□ -1.5
ERVFC1P60507 YWHAQP9-201ENST00000445891 512 ntBASIC5.69□□□□□ -1.5
ERVFC1P60507 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC5.69□□□□□ -1.5
ERVFC1P60507 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC5.69□□□□□ -1.5
ERVFC1P60507 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC5.69□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 77.2 ms