Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
VSX2P58304 SNORA27.3-201ENST00000364937 134 ntBASIC3.58□□□□□ -1.84
VSX2P58304 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC3.58□□□□□ -1.84
VSX2P58304 SNORD3H-201ENST00000384486 214 ntBASIC3.58□□□□□ -1.84
VSX2P58304 HLFP1-201ENST00000402375 499 ntBASIC3.58□□□□□ -1.84
VSX2P58304 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC3.58□□□□□ -1.84
VSX2P58304 AC013404.1-201ENST00000413068 249 ntBASIC3.58□□□□□ -1.84
VSX2P58304 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
VSX2P58304 AC073464.3-201ENST00000422564 712 ntBASIC3.58□□□□□ -1.84
VSX2P58304 LINC01468-201ENST00000422763 570 ntTSL 3 BASIC3.58□□□□□ -1.84
VSX2P58304 NPM1P24-201ENST00000428039 894 ntBASIC3.58□□□□□ -1.84
VSX2P58304 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC3.58□□□□□ -1.84
VSX2P58304 GOT2P5-201ENST00000433995 546 ntBASIC3.58□□□□□ -1.84
VSX2P58304 LINC00972-202ENST00000438065 788 ntTSL 3 BASIC3.58□□□□□ -1.84
VSX2P58304 VN1R34P-201ENST00000447387 883 ntBASIC3.58□□□□□ -1.84
VSX2P58304 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC3.58□□□□□ -1.84
VSX2P58304 UBDP1-202ENST00000457888 382 ntBASIC3.58□□□□□ -1.84
VSX2P58304 AC018635.1-201ENST00000468292 1030 ntBASIC3.58□□□□□ -1.84
VSX2P58304 AC011037.1-201ENST00000483964 558 ntBASIC3.58□□□□□ -1.84
VSX2P58304 TRBV12-2-201ENST00000489763 344 ntBASIC3.58□□□□□ -1.84
VSX2P58304 MTCO1P31-201ENST00000506355 492 ntBASIC3.58□□□□□ -1.84
VSX2P58304 BTF3L4P4-201ENST00000506381 449 ntBASIC3.58□□□□□ -1.84
VSX2P58304 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC3.58□□□□□ -1.84
VSX2P58304 HMGN1P11-201ENST00000508668 303 ntBASIC3.58□□□□□ -1.84
VSX2P58304 USP9YP5-201ENST00000511770 630 ntBASIC3.58□□□□□ -1.84
VSX2P58304 RNU6-760P-201ENST00000516078 97 ntBASIC3.58□□□□□ -1.84
VSX2P58304 TRMT10BP1-201ENST00000519377 943 ntBASIC3.58□□□□□ -1.84
VSX2P58304 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC3.58□□□□□ -1.84
VSX2P58304 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC3.58□□□□□ -1.84
VSX2P58304 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC3.58□□□□□ -1.84
VSX2P58304 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC3.58□□□□□ -1.84
VSX2P58304 AC012414.2-201ENST00000559474 187 ntBASIC3.58□□□□□ -1.84
VSX2P58304 MIR4444-1-201ENST00000581696 74 ntBASIC3.58□□□□□ -1.84
VSX2P58304 MIR5187-201ENST00000583479 76 ntBASIC3.58□□□□□ -1.84
VSX2P58304 MIR4444-2-201ENST00000584390 74 ntBASIC3.58□□□□□ -1.84
VSX2P58304 MTCO3P22-201ENST00000603219 784 ntBASIC3.58□□□□□ -1.84
VSX2P58304 AC005972.3-201ENST00000606304 481 ntBASIC3.58□□□□□ -1.84
VSX2P58304 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC3.58□□□□□ -1.84
VSX2P58304 AC009318.3-201ENST00000616916 503 ntBASIC3.58□□□□□ -1.84
VSX2P58304 TNFAIP6-201ENST00000243347 1424 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
VSX2P58304 AC066616.2-201ENST00000559334 1481 ntBASIC3.58□□□□□ -1.84
VSX2P58304 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
VSX2P58304 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
VSX2P58304 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.57□□□□□ -1.84
VSX2P58304 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
VSX2P58304 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC3.57□□□□□ -1.84
VSX2P58304 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
VSX2P58304 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
VSX2P58304 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
VSX2P58304 RNU1-18P-201ENST00000363062 164 ntBASIC3.57□□□□□ -1.84
VSX2P58304 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC3.57□□□□□ -1.84
VSX2P58304 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
VSX2P58304 RNU6-40P-201ENST00000384254 107 ntBASIC3.57□□□□□ -1.84
VSX2P58304 MIR670-201ENST00000390142 98 ntBASIC3.57□□□□□ -1.84
VSX2P58304 RNA5SP171-201ENST00000391071 115 ntBASIC3.57□□□□□ -1.84
VSX2P58304 SOD2P1-201ENST00000396543 562 ntBASIC3.57□□□□□ -1.84
VSX2P58304 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC3.57□□□□□ -1.84
VSX2P58304 NAP1L1P2-201ENST00000414182 1089 ntBASIC3.57□□□□□ -1.84
VSX2P58304 OR5AW1P-201ENST00000426334 1006 ntBASIC3.57□□□□□ -1.84
VSX2P58304 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC3.57□□□□□ -1.84
VSX2P58304 IFNNP1-201ENST00000429219 553 ntBASIC3.57□□□□□ -1.84
VSX2P58304 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC3.57□□□□□ -1.84
VSX2P58304 AC009263.1-201ENST00000441193 1239 ntBASIC3.57□□□□□ -1.84
VSX2P58304 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC3.57□□□□□ -1.84
VSX2P58304 AC023512.1-201ENST00000444513 499 ntBASIC3.57□□□□□ -1.84
VSX2P58304 AL133547.1-201ENST00000448546 220 ntBASIC3.57□□□□□ -1.84
VSX2P58304 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC3.57□□□□□ -1.84
VSX2P58304 RPS4XP5-202ENST00000449995 1334 ntBASIC3.57□□□□□ -1.84
VSX2P58304 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC3.57□□□□□ -1.84
VSX2P58304 HGF-207ENST00000453018 721 ntTSL 3 BASIC3.57□□□□□ -1.84
VSX2P58304 MTND3P4-201ENST00000453537 303 ntBASIC3.57□□□□□ -1.84
VSX2P58304 AC098824.1-201ENST00000453565 980 ntBASIC3.57□□□□□ -1.84
VSX2P58304 AL358176.1-201ENST00000457477 357 ntTSL 5 BASIC3.57□□□□□ -1.84
VSX2P58304 AC107398.1-201ENST00000486904 505 ntBASIC3.57□□□□□ -1.84
VSX2P58304 FO393419.2-201ENST00000492975 428 ntTSL 3 BASIC3.57□□□□□ -1.84
VSX2P58304 SSR3-208ENST00000496050 579 ntTSL 4 BASIC3.57□□□□□ -1.84
VSX2P58304 UBE2CP3-201ENST00000502715 450 ntBASIC3.57□□□□□ -1.84
VSX2P58304 AC008802.1-201ENST00000519121 791 ntBASIC3.57□□□□□ -1.84
VSX2P58304 NAT2-202ENST00000520116 716 ntTSL 3 BASIC3.57□□□□□ -1.84
VSX2P58304 SUMO2P20-201ENST00000520803 283 ntBASIC3.57□□□□□ -1.84
VSX2P58304 AC007991.1-201ENST00000522680 631 ntBASIC3.57□□□□□ -1.84
VSX2P58304 OR4C2P-201ENST00000530855 1064 ntBASIC3.57□□□□□ -1.84
VSX2P58304 ZNF285B-201ENST00000561698 1767 ntBASIC3.57□□□□□ -1.84
VSX2P58304 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC3.57□□□□□ -1.84
VSX2P58304 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC3.57□□□□□ -1.84
VSX2P58304 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC3.57□□□□□ -1.84
VSX2P58304 BNIP3P22-201ENST00000593399 556 ntBASIC3.57□□□□□ -1.84
VSX2P58304 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC3.57□□□□□ -1.84
VSX2P58304 Z82195.1-201ENST00000604558 398 ntBASIC3.57□□□□□ -1.84
VSX2P58304 AL049634.3-201ENST00000604968 457 ntBASIC3.57□□□□□ -1.84
VSX2P58304 AC079791.1-201ENST00000605356 973 ntBASIC3.57□□□□□ -1.84
VSX2P58304 AC243654.2-201ENST00000612843 443 ntBASIC3.57□□□□□ -1.84
VSX2P58304 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC3.57□□□□□ -1.84
VSX2P58304 AC104820.1-201ENST00000624183 307 ntBASIC3.57□□□□□ -1.84
VSX2P58304 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC3.57□□□□□ -1.84
VSX2P58304 MAPK10-372ENST00000641954 3413 ntBASIC3.57□□□□□ -1.84
VSX2P58304 TNPO1P3-201ENST00000436471 2662 ntBASIC3.57□□□□□ -1.84
VSX2P58304 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
VSX2P58304 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.56□□□□□ -1.84
VSX2P58304 AC006504.1-201ENST00000562493 3666 ntBASIC3.56□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 86.3 ms