Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 RNU1-103P-201ENST00000516502 125 ntBASIC3.66□□□□□ -1.82
CLDN6P56747 AC025437.3-201ENST00000523178 771 ntTSL 5 BASIC3.66□□□□□ -1.82
CLDN6P56747 OR4A12P-201ENST00000530847 918 ntBASIC3.66□□□□□ -1.82
CLDN6P56747 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC3.66□□□□□ -1.82
CLDN6P56747 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC3.66□□□□□ -1.82
CLDN6P56747 MIR7973-1-201ENST00000614683 76 ntBASIC3.66□□□□□ -1.82
CLDN6P56747 MIR8058-201ENST00000615737 89 ntBASIC3.66□□□□□ -1.82
CLDN6P56747 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC3.66□□□□□ -1.82
CLDN6P56747 AP005264.7-201ENST00000625003 745 ntBASIC3.66□□□□□ -1.82
CLDN6P56747 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC3.66□□□□□ -1.82
CLDN6P56747 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
CLDN6P56747 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC3.66□□□□□ -1.82
CLDN6P56747 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
CLDN6P56747 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC3.65□□□□□ -1.82
CLDN6P56747 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.65□□□□□ -1.82
CLDN6P56747 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.82
CLDN6P56747 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
CLDN6P56747 SYF2-202ENST00000354361 926 ntTSL 2 BASIC3.65□□□□□ -1.83
CLDN6P56747 GCNT6-201ENST00000379591 934 ntBASIC3.65□□□□□ -1.83
CLDN6P56747 ZNF602P-201ENST00000405929 924 ntBASIC3.65□□□□□ -1.83
CLDN6P56747 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC3.65□□□□□ -1.83
CLDN6P56747 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC3.65□□□□□ -1.83
CLDN6P56747 AC097713.2-201ENST00000430199 356 ntBASIC3.65□□□□□ -1.83
CLDN6P56747 RPS6P12-201ENST00000432491 726 ntBASIC3.65□□□□□ -1.83
CLDN6P56747 MTCO1P52-201ENST00000433928 531 ntBASIC3.65□□□□□ -1.83
CLDN6P56747 TRAPPC2P9-201ENST00000434556 343 ntBASIC3.65□□□□□ -1.83
CLDN6P56747 AC245517.2-201ENST00000442890 346 ntBASIC3.65□□□□□ -1.83
CLDN6P56747 RPL21P23-201ENST00000446654 460 ntBASIC3.65□□□□□ -1.83
CLDN6P56747 MTND2P8-201ENST00000450555 1025 ntBASIC3.65□□□□□ -1.83
CLDN6P56747 AL645939.1-201ENST00000453429 797 ntBASIC3.65□□□□□ -1.83
CLDN6P56747 AC008155.2-201ENST00000464337 397 ntBASIC3.65□□□□□ -1.83
CLDN6P56747 SYT14P1-201ENST00000481459 721 ntBASIC3.65□□□□□ -1.83
CLDN6P56747 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC3.65□□□□□ -1.83
CLDN6P56747 AC005726.1-201ENST00000494679 427 ntBASIC3.65□□□□□ -1.83
CLDN6P56747 AC091917.2-201ENST00000505002 744 ntBASIC3.65□□□□□ -1.83
CLDN6P56747 AC119751.5-201ENST00000514077 770 ntBASIC3.65□□□□□ -1.83
CLDN6P56747 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC3.65□□□□□ -1.83
CLDN6P56747 C11orf65-206ENST00000529391 973 ntAPPRIS P1 TSL 2 BASIC3.65□□□□□ -1.83
CLDN6P56747 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC3.65□□□□□ -1.83
CLDN6P56747 AC022968.1-201ENST00000567372 442 ntBASIC3.65□□□□□ -1.83
CLDN6P56747 AC007599.1-201ENST00000568688 1174 ntBASIC3.65□□□□□ -1.83
CLDN6P56747 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC3.65□□□□□ -1.83
CLDN6P56747 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC3.65□□□□□ -1.83
CLDN6P56747 APOC2-203ENST00000590360 744 ntAPPRIS P1 TSL 3 BASIC3.65□□□□□ -1.83
CLDN6P56747 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC3.65□□□□□ -1.83
CLDN6P56747 MIMT1-201ENST00000597105 1050 ntBASIC3.65□□□□□ -1.83
CLDN6P56747 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC3.65□□□□□ -1.83
CLDN6P56747 AC243312.2-201ENST00000623340 601 ntBASIC3.65□□□□□ -1.83
CLDN6P56747 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.65□□□□□ -1.83
CLDN6P56747 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
CLDN6P56747 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
CLDN6P56747 HSP90AA5P-201ENST00000438353 2192 ntBASIC3.65□□□□□ -1.83
CLDN6P56747 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.64□□□□□ -1.83
CLDN6P56747 AC007823.1-201ENST00000569932 1566 ntBASIC3.64□□□□□ -1.83
CLDN6P56747 AL136964.1-201ENST00000622038 2990 ntBASIC3.64□□□□□ -1.83
CLDN6P56747 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.64□□□□□ -1.83
CLDN6P56747 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.64□□□□□ -1.83
CLDN6P56747 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC3.64□□□□□ -1.83
CLDN6P56747 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC3.64□□□□□ -1.83
CLDN6P56747 RNA5SP306-201ENST00000411087 107 ntBASIC3.64□□□□□ -1.83
CLDN6P56747 RPS12P23-201ENST00000419579 400 ntBASIC3.64□□□□□ -1.83
CLDN6P56747 TCEA1P2-201ENST00000420496 906 ntBASIC3.64□□□□□ -1.83
CLDN6P56747 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC3.64□□□□□ -1.83
CLDN6P56747 FTH1P6-201ENST00000430768 320 ntBASIC3.64□□□□□ -1.83
CLDN6P56747 RPS24P8-201ENST00000431490 402 ntBASIC3.64□□□□□ -1.83
CLDN6P56747 AC008080.4-202ENST00000440034 1005 ntTSL 3 BASIC3.64□□□□□ -1.83
CLDN6P56747 RPS26P15-201ENST00000488067 348 ntBASIC3.64□□□□□ -1.83
CLDN6P56747 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC3.64□□□□□ -1.83
CLDN6P56747 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC3.64□□□□□ -1.83
CLDN6P56747 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC3.64□□□□□ -1.83
CLDN6P56747 SULT6B1-205ENST00000535679 1027 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
CLDN6P56747 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC3.64□□□□□ -1.83
CLDN6P56747 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC3.64□□□□□ -1.83
CLDN6P56747 RPL21P12-201ENST00000559810 515 ntBASIC3.64□□□□□ -1.83
CLDN6P56747 MIR5187-201ENST00000583479 76 ntBASIC3.64□□□□□ -1.83
CLDN6P56747 AC115085.1-201ENST00000588924 229 ntBASIC3.64□□□□□ -1.83
CLDN6P56747 AC067852.4-201ENST00000590314 478 ntBASIC3.64□□□□□ -1.83
CLDN6P56747 AC079880.2-201ENST00000603790 1213 ntBASIC3.64□□□□□ -1.83
CLDN6P56747 AC022387.2-201ENST00000604050 448 ntBASIC3.64□□□□□ -1.83
CLDN6P56747 AC007390.2-201ENST00000606229 3803 ntBASIC3.64□□□□□ -1.83
CLDN6P56747 AC079684.1-201ENST00000621405 437 ntBASIC3.64□□□□□ -1.83
CLDN6P56747 C8orf89-203ENST00000625134 507 ntAPPRIS ALT2 TSL 1 (best) BASIC3.64□□□□□ -1.83
CLDN6P56747 AC119674.1-220ENST00000641502 1048 ntBASIC3.64□□□□□ -1.83
CLDN6P56747 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
CLDN6P56747 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
CLDN6P56747 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
CLDN6P56747 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
CLDN6P56747 MAPK10-253ENST00000641010 4072 ntBASIC3.64□□□□□ -1.83
CLDN6P56747 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC3.63□□□□□ -1.83
CLDN6P56747 AC007529.1-201ENST00000418574 2178 ntBASIC3.63□□□□□ -1.83
CLDN6P56747 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
CLDN6P56747 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC3.63□□□□□ -1.83
CLDN6P56747 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC3.63□□□□□ -1.83
CLDN6P56747 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.63□□□□□ -1.83
CLDN6P56747 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC3.63□□□□□ -1.83
CLDN6P56747 AC134882.1-201ENST00000603738 1676 ntBASIC3.63□□□□□ -1.83
CLDN6P56747 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC3.63□□□□□ -1.83
CLDN6P56747 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
CLDN6P56747 RN7SKP44-201ENST00000363602 316 ntBASIC3.63□□□□□ -1.83
CLDN6P56747 U3.15-201ENST00000365398 212 ntBASIC3.63□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 119.9 ms