Protein–RNA interactions for Protein: P56524

HDAC4, Histone deacetylase 4, humanhuman

Predictions only

Length 1,084 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4P56524 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC4.65□□□□□ -1.67
HDAC4P56524 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC4.65□□□□□ -1.67
HDAC4P56524 AC010857.1-201ENST00000606398 594 ntBASIC4.65□□□□□ -1.67
HDAC4P56524 AC021755.4-201ENST00000616620 456 ntBASIC4.65□□□□□ -1.67
HDAC4P56524 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC4.65□□□□□ -1.67
HDAC4P56524 ZNF663P-202ENST00000641770 1131 ntBASIC4.65□□□□□ -1.67
HDAC4P56524 LINC02211-204ENST00000642024 1070 ntBASIC4.65□□□□□ -1.67
HDAC4P56524 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
HDAC4P56524 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
HDAC4P56524 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
HDAC4P56524 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
HDAC4P56524 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
HDAC4P56524 AC008725.1-201ENST00000605123 2263 ntBASIC4.65□□□□□ -1.67
HDAC4P56524 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
HDAC4P56524 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.64□□□□□ -1.67
HDAC4P56524 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
HDAC4P56524 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC4.64□□□□□ -1.67
HDAC4P56524 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC4.64□□□□□ -1.67
HDAC4P56524 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC4.64□□□□□ -1.67
HDAC4P56524 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
HDAC4P56524 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
HDAC4P56524 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC4.64□□□□□ -1.67
HDAC4P56524 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
HDAC4P56524 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
HDAC4P56524 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC4.64□□□□□ -1.67
HDAC4P56524 RNU1-130P-201ENST00000363930 160 ntBASIC4.64□□□□□ -1.67
HDAC4P56524 MIR3074-201ENST00000384885 81 ntBASIC4.64□□□□□ -1.67
HDAC4P56524 MIR129-1-201ENST00000384972 72 ntBASIC4.64□□□□□ -1.67
HDAC4P56524 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
HDAC4P56524 RPS3AP23-201ENST00000401762 784 ntBASIC4.64□□□□□ -1.67
HDAC4P56524 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC4.64□□□□□ -1.67
HDAC4P56524 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC4.64□□□□□ -1.67
HDAC4P56524 RAC1P3-201ENST00000416129 580 ntBASIC4.64□□□□□ -1.67
HDAC4P56524 RPS24P7-201ENST00000416921 246 ntBASIC4.64□□□□□ -1.67
HDAC4P56524 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC4.64□□□□□ -1.67
HDAC4P56524 MTCO2P21-201ENST00000419780 677 ntBASIC4.64□□□□□ -1.67
HDAC4P56524 RPF2P1-201ENST00000424137 906 ntBASIC4.64□□□□□ -1.67
HDAC4P56524 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC4.64□□□□□ -1.67
HDAC4P56524 AC068287.1-201ENST00000430283 295 ntBASIC4.64□□□□□ -1.67
HDAC4P56524 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC4.64□□□□□ -1.67
HDAC4P56524 TRIM60P3Y-201ENST00000432201 673 ntBASIC4.64□□□□□ -1.67
HDAC4P56524 CETN4P-201ENST00000432407 469 ntBASIC4.64□□□□□ -1.67
HDAC4P56524 LINC01826-201ENST00000432894 584 ntTSL 4 BASIC4.64□□□□□ -1.67
HDAC4P56524 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC4.64□□□□□ -1.67
HDAC4P56524 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC4.64□□□□□ -1.67
HDAC4P56524 CEACAMP1-201ENST00000434624 1035 ntBASIC4.64□□□□□ -1.67
HDAC4P56524 AC084290.1-201ENST00000434995 374 ntBASIC4.64□□□□□ -1.67
HDAC4P56524 EEF1A1P39-201ENST00000440791 250 ntBASIC4.64□□□□□ -1.67
HDAC4P56524 Z77249.1-201ENST00000444622 1175 ntBASIC4.64□□□□□ -1.67
HDAC4P56524 NDUFS5P3-201ENST00000450668 321 ntBASIC4.64□□□□□ -1.67
HDAC4P56524 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC4.64□□□□□ -1.67
HDAC4P56524 AC096992.1-201ENST00000459808 709 ntBASIC4.64□□□□□ -1.67
HDAC4P56524 AC005410.1-202ENST00000460347 485 ntBASIC4.64□□□□□ -1.67
HDAC4P56524 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC4.64□□□□□ -1.67
HDAC4P56524 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
HDAC4P56524 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC4.64□□□□□ -1.67
HDAC4P56524 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
HDAC4P56524 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC4.64□□□□□ -1.67
HDAC4P56524 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
HDAC4P56524 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
HDAC4P56524 AC118282.2-201ENST00000508739 374 ntBASIC4.64□□□□□ -1.67
HDAC4P56524 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
HDAC4P56524 OSGEPL1-AS1-203ENST00000523895 567 ntTSL 4 BASIC4.64□□□□□ -1.67
HDAC4P56524 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC4.64□□□□□ -1.67
HDAC4P56524 MTND4P33-201ENST00000556706 766 ntBASIC4.64□□□□□ -1.67
HDAC4P56524 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC4.64□□□□□ -1.67
HDAC4P56524 VN1R83P-201ENST00000595685 445 ntBASIC4.64□□□□□ -1.67
HDAC4P56524 AL020997.3-201ENST00000602843 359 ntBASIC4.64□□□□□ -1.67
HDAC4P56524 AC006237.1-201ENST00000603816 480 ntTSL 3 BASIC4.64□□□□□ -1.67
HDAC4P56524 ELOCP35-201ENST00000604289 336 ntBASIC4.64□□□□□ -1.67
HDAC4P56524 AC025811.1-201ENST00000604312 472 ntBASIC4.64□□□□□ -1.67
HDAC4P56524 AL160290.3-201ENST00000604869 165 ntBASIC4.64□□□□□ -1.67
HDAC4P56524 AC099676.1-201ENST00000608886 657 ntBASIC4.64□□□□□ -1.67
HDAC4P56524 AC083809.1-201ENST00000615051 472 ntBASIC4.64□□□□□ -1.67
HDAC4P56524 AC004825.2-201ENST00000616634 455 ntBASIC4.64□□□□□ -1.67
HDAC4P56524 AC243756.2-201ENST00000618406 463 ntBASIC4.64□□□□□ -1.67
HDAC4P56524 AC013470.4-201ENST00000619978 986 ntBASIC4.64□□□□□ -1.67
HDAC4P56524 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC4.64□□□□□ -1.67
HDAC4P56524 AC090897.3-201ENST00000636973 1157 ntBASIC4.64□□□□□ -1.67
HDAC4P56524 OR2J3-201ENST00000377169 1325 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
HDAC4P56524 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC4.64□□□□□ -1.67
HDAC4P56524 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
HDAC4P56524 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC4.64□□□□□ -1.67
HDAC4P56524 MTND4P10-201ENST00000446199 1363 ntBASIC4.64□□□□□ -1.67
HDAC4P56524 OR56B2P-202ENST00000641377 2453 ntBASIC4.64□□□□□ -1.67
HDAC4P56524 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC4.64□□□□□ -1.67
HDAC4P56524 ASNSP1-204ENST00000641977 1664 ntBASIC4.64□□□□□ -1.67
HDAC4P56524 AC107953.2-201ENST00000518362 1408 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
HDAC4P56524 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
HDAC4P56524 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC4.63□□□□□ -1.67
HDAC4P56524 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
HDAC4P56524 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
HDAC4P56524 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
HDAC4P56524 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
HDAC4P56524 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC4.63□□□□□ -1.67
HDAC4P56524 IFNG-201ENST00000229135 1218 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
HDAC4P56524 RNU1-108P-201ENST00000362556 161 ntBASIC4.63□□□□□ -1.67
HDAC4P56524 RNA5SP307-201ENST00000362863 116 ntBASIC4.63□□□□□ -1.67
HDAC4P56524 RNU6-636P-201ENST00000384598 107 ntBASIC4.63□□□□□ -1.67
HDAC4P56524 MIR16-1-201ENST00000385271 89 ntBASIC4.63□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 80.2 ms