Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC3.86□□□□□ -1.79
CDH6P55285 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
CDH6P55285 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
CDH6P55285 OR5K3-201ENST00000383695 966 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
CDH6P55285 AL589655.1-201ENST00000405398 482 ntBASIC3.86□□□□□ -1.79
CDH6P55285 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC3.86□□□□□ -1.79
CDH6P55285 HMGB3P20-201ENST00000417997 600 ntBASIC3.86□□□□□ -1.79
CDH6P55285 PTP4A1P5-201ENST00000420305 455 ntBASIC3.86□□□□□ -1.79
CDH6P55285 AL591419.1-201ENST00000427423 339 ntBASIC3.86□□□□□ -1.79
CDH6P55285 RPS29P7-201ENST00000439662 171 ntBASIC3.86□□□□□ -1.79
CDH6P55285 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC3.86□□□□□ -1.79
CDH6P55285 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC3.86□□□□□ -1.79
CDH6P55285 UBDP1-202ENST00000457888 382 ntBASIC3.86□□□□□ -1.79
CDH6P55285 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC3.86□□□□□ -1.79
CDH6P55285 RPL9P32-201ENST00000464118 620 ntBASIC3.86□□□□□ -1.79
CDH6P55285 GAPDHP36-201ENST00000480688 918 ntBASIC3.86□□□□□ -1.79
CDH6P55285 DWORF-201ENST00000489090 873 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
CDH6P55285 NIPA2P2-201ENST00000496376 1083 ntBASIC3.86□□□□□ -1.79
CDH6P55285 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC3.86□□□□□ -1.79
CDH6P55285 AL121766.1-201ENST00000547436 487 ntBASIC3.86□□□□□ -1.79
CDH6P55285 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC3.86□□□□□ -1.79
CDH6P55285 MIR5685-201ENST00000579080 79 ntBASIC3.86□□□□□ -1.79
CDH6P55285 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC3.86□□□□□ -1.79
CDH6P55285 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC3.86□□□□□ -1.79
CDH6P55285 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
CDH6P55285 AC239803.2-201ENST00000610161 430 ntBASIC3.86□□□□□ -1.79
CDH6P55285 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
CDH6P55285 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
CDH6P55285 AL731566.2-201ENST00000618971 317 ntBASIC3.86□□□□□ -1.79
CDH6P55285 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
CDH6P55285 CR381670.1-201ENST00000624291 1693 ntBASIC3.86□□□□□ -1.79
CDH6P55285 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC3.86□□□□□ -1.79
CDH6P55285 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.86□□□□□ -1.79
CDH6P55285 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC3.86□□□□□ -1.79
CDH6P55285 AC027287.1-201ENST00000553115 1453 ntBASIC3.86□□□□□ -1.79
CDH6P55285 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.85□□□□□ -1.79
CDH6P55285 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.85□□□□□ -1.79
CDH6P55285 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
CDH6P55285 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC3.85□□□□□ -1.79
CDH6P55285 TSPAN8-201ENST00000247829 1227 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
CDH6P55285 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
CDH6P55285 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
CDH6P55285 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
CDH6P55285 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC3.85□□□□□ -1.79
CDH6P55285 MIR1193-201ENST00000408109 78 ntBASIC3.85□□□□□ -1.79
CDH6P55285 AC234782.4-201ENST00000417646 1048 ntBASIC3.85□□□□□ -1.79
CDH6P55285 AL139247.1-201ENST00000422768 325 ntBASIC3.85□□□□□ -1.79
CDH6P55285 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC3.85□□□□□ -1.79
CDH6P55285 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC3.85□□□□□ -1.79
CDH6P55285 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC3.85□□□□□ -1.79
CDH6P55285 NDUFB1P1-201ENST00000435191 180 ntBASIC3.85□□□□□ -1.79
CDH6P55285 SKP1P1-201ENST00000438081 489 ntBASIC3.85□□□□□ -1.79
CDH6P55285 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC3.85□□□□□ -1.79
CDH6P55285 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC3.85□□□□□ -1.79
CDH6P55285 AL161747.1-201ENST00000480068 358 ntBASIC3.85□□□□□ -1.79
CDH6P55285 AC104687.1-201ENST00000485829 412 ntBASIC3.85□□□□□ -1.79
CDH6P55285 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC3.85□□□□□ -1.79
CDH6P55285 AC093853.1-201ENST00000515689 483 ntBASIC3.85□□□□□ -1.79
CDH6P55285 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC3.85□□□□□ -1.79
CDH6P55285 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC3.85□□□□□ -1.79
CDH6P55285 OR7E13P-201ENST00000526052 910 ntBASIC3.85□□□□□ -1.79
CDH6P55285 AC084824.1-201ENST00000550917 1005 ntBASIC3.85□□□□□ -1.79
CDH6P55285 POLR2KP1-201ENST00000553226 168 ntBASIC3.85□□□□□ -1.79
CDH6P55285 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC3.85□□□□□ -1.79
CDH6P55285 AC012414.2-201ENST00000559474 187 ntBASIC3.85□□□□□ -1.79
CDH6P55285 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC3.85□□□□□ -1.79
CDH6P55285 AL157938.2-208ENST00000590461 877 ntTSL 5 BASIC3.85□□□□□ -1.79
CDH6P55285 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC3.85□□□□□ -1.79
CDH6P55285 KLKP1-201ENST00000595979 403 ntBASIC3.85□□□□□ -1.79
CDH6P55285 SUMO2P14-201ENST00000604488 293 ntBASIC3.85□□□□□ -1.79
CDH6P55285 AL451086.1-201ENST00000605596 223 ntBASIC3.85□□□□□ -1.79
CDH6P55285 PACRG-211ENST00000621363 360 ntTSL 5 BASIC3.85□□□□□ -1.79
CDH6P55285 AC024023.1-201ENST00000624530 922 ntBASIC3.85□□□□□ -1.79
CDH6P55285 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC3.85□□□□□ -1.79
CDH6P55285 AL358975.1-202ENST00000628133 589 ntTSL 5 BASIC3.85□□□□□ -1.79
CDH6P55285 OR6C71P-202ENST00000641886 1107 ntBASIC3.85□□□□□ -1.79
CDH6P55285 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
CDH6P55285 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
CDH6P55285 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
CDH6P55285 AP001486.2-201ENST00000561652 5113 ntBASIC3.84□□□□□ -1.79
CDH6P55285 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.79
CDH6P55285 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
CDH6P55285 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.79
CDH6P55285 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC3.84□□□□□ -1.79
CDH6P55285 OR4A15-201ENST00000314706 1035 ntBASIC3.84□□□□□ -1.79
CDH6P55285 RN7SKP280-201ENST00000364196 304 ntBASIC3.84□□□□□ -1.79
CDH6P55285 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC3.84□□□□□ -1.79
CDH6P55285 AC136624.1-201ENST00000400791 413 ntBASIC3.84□□□□□ -1.79
CDH6P55285 AC010385.1-201ENST00000412374 256 ntBASIC3.84□□□□□ -1.79
CDH6P55285 AL691447.1-201ENST00000419456 387 ntBASIC3.84□□□□□ -1.79
CDH6P55285 OR4F13P-201ENST00000428478 931 ntBASIC3.84□□□□□ -1.79
CDH6P55285 MOB1AP1-201ENST00000430903 535 ntBASIC3.84□□□□□ -1.79
CDH6P55285 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC3.84□□□□□ -1.79
CDH6P55285 AC023347.2-201ENST00000433994 462 ntBASIC3.84□□□□□ -1.79
CDH6P55285 AC105402.2-201ENST00000438503 358 ntBASIC3.84□□□□□ -1.79
CDH6P55285 CD200R1-203ENST00000440122 847 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
CDH6P55285 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC3.84□□□□□ -1.79
CDH6P55285 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC3.84□□□□□ -1.79
CDH6P55285 NANOGP10-201ENST00000453325 895 ntBASIC3.84□□□□□ -1.79
CDH6P55285 AC099563.1-201ENST00000456086 418 ntBASIC3.84□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 76.1 ms