Protein–RNA interactions for Protein: P55072

VCP, Transitional endoplasmic reticulum ATPase, humanhuman

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPP55072 CTNNAL1-203ENST00000374594 824 ntTSL 3 BASIC4.3□□□□□ -1.72
VCPP55072 OR52E6-202ENST00000379946 954 ntBASIC4.3□□□□□ -1.72
VCPP55072 SNORA5A-201ENST00000384111 134 ntBASIC4.3□□□□□ -1.72
VCPP55072 RNU6-185P-201ENST00000384421 107 ntBASIC4.3□□□□□ -1.72
VCPP55072 MIR183-201ENST00000384958 110 ntBASIC4.3□□□□□ -1.72
VCPP55072 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
VCPP55072 SNORA3C-201ENST00000408792 125 ntBASIC4.3□□□□□ -1.72
VCPP55072 RAC1P3-201ENST00000416129 580 ntBASIC4.3□□□□□ -1.72
VCPP55072 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC4.3□□□□□ -1.72
VCPP55072 MTND2P11-201ENST00000423638 648 ntBASIC4.3□□□□□ -1.72
VCPP55072 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC4.3□□□□□ -1.72
VCPP55072 LARS2-AS1-201ENST00000442534 575 ntTSL 4 BASIC4.3□□□□□ -1.72
VCPP55072 AC017099.1-201ENST00000448261 1028 ntBASIC4.3□□□□□ -1.72
VCPP55072 TPMTP4-201ENST00000450749 678 ntBASIC4.3□□□□□ -1.72
VCPP55072 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC4.3□□□□□ -1.72
VCPP55072 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC4.3□□□□□ -1.72
VCPP55072 CABYRP1-201ENST00000465493 1045 ntBASIC4.3□□□□□ -1.72
VCPP55072 RPL21P71-201ENST00000465598 459 ntBASIC4.3□□□□□ -1.72
VCPP55072 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC4.3□□□□□ -1.72
VCPP55072 SETP6-201ENST00000479329 568 ntBASIC4.3□□□□□ -1.72
VCPP55072 RPS26P15-201ENST00000488067 348 ntBASIC4.3□□□□□ -1.72
VCPP55072 AC110792.1-201ENST00000491826 472 ntBASIC4.3□□□□□ -1.72
VCPP55072 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC4.3□□□□□ -1.72
VCPP55072 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC4.3□□□□□ -1.72
VCPP55072 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC4.3□□□□□ -1.72
VCPP55072 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
VCPP55072 RNU1-95P-201ENST00000516357 160 ntBASIC4.3□□□□□ -1.72
VCPP55072 RNU1-103P-201ENST00000516502 125 ntBASIC4.3□□□□□ -1.72
VCPP55072 RNU1-128P-201ENST00000516704 160 ntBASIC4.3□□□□□ -1.72
VCPP55072 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC4.3□□□□□ -1.72
VCPP55072 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC4.3□□□□□ -1.72
VCPP55072 AC067852.4-201ENST00000590314 478 ntBASIC4.3□□□□□ -1.72
VCPP55072 MIR7973-1-201ENST00000614683 76 ntBASIC4.3□□□□□ -1.72
VCPP55072 uc_338.32-201ENST00000615087 172 ntBASIC4.3□□□□□ -1.72
VCPP55072 AC095038.2-201ENST00000621464 1070 ntBASIC4.3□□□□□ -1.72
VCPP55072 AP005264.7-201ENST00000625003 745 ntBASIC4.3□□□□□ -1.72
VCPP55072 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
VCPP55072 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
VCPP55072 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC4.3□□□□□ -1.72
VCPP55072 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
VCPP55072 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
VCPP55072 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC4.29□□□□□ -1.72
VCPP55072 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC4.29□□□□□ -1.72
VCPP55072 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
VCPP55072 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
VCPP55072 MARK2P15-201ENST00000432204 2186 ntBASIC4.29□□□□□ -1.72
VCPP55072 AC024341.1-201ENST00000526444 1552 ntBASIC4.29□□□□□ -1.72
VCPP55072 U3.15-201ENST00000365398 212 ntBASIC4.29□□□□□ -1.72
VCPP55072 TPT1P2-201ENST00000413105 503 ntBASIC4.29□□□□□ -1.72
VCPP55072 AC105402.1-201ENST00000413336 545 ntBASIC4.29□□□□□ -1.72
VCPP55072 AC019070.1-201ENST00000415008 1024 ntBASIC4.29□□□□□ -1.72
VCPP55072 AL357078.2-201ENST00000416486 427 ntBASIC4.29□□□□□ -1.72
VCPP55072 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC4.29□□□□□ -1.72
VCPP55072 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC4.29□□□□□ -1.72
VCPP55072 LINC01745-201ENST00000430921 372 ntTSL 5 BASIC4.29□□□□□ -1.72
VCPP55072 RPS24P8-201ENST00000431490 402 ntBASIC4.29□□□□□ -1.72
VCPP55072 AC005358.1-201ENST00000445508 1143 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
VCPP55072 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC4.29□□□□□ -1.72
VCPP55072 MTND2P8-201ENST00000450555 1025 ntBASIC4.29□□□□□ -1.72
VCPP55072 RNA5SP246-201ENST00000458909 119 ntBASIC4.29□□□□□ -1.72
VCPP55072 RPS4XP15-201ENST00000489210 795 ntBASIC4.29□□□□□ -1.72
VCPP55072 AL139099.1-201ENST00000497398 403 ntBASIC4.29□□□□□ -1.72
VCPP55072 HPRT1P2-201ENST00000505250 544 ntBASIC4.29□□□□□ -1.72
VCPP55072 AC021192.1-201ENST00000510169 791 ntTSL 3 BASIC4.29□□□□□ -1.72
VCPP55072 RN7SKP141-201ENST00000516167 338 ntBASIC4.29□□□□□ -1.72
VCPP55072 IGKV2-38-201ENST00000517443 247 ntBASIC4.29□□□□□ -1.72
VCPP55072 AC113423.1-201ENST00000523279 289 ntTSL 3 BASIC4.29□□□□□ -1.72
VCPP55072 AC024224.1-201ENST00000538284 609 ntBASIC4.29□□□□□ -1.72
VCPP55072 RFPL1S-203ENST00000539579 330 ntBASIC4.29□□□□□ -1.72
VCPP55072 CBX3P5-201ENST00000552017 521 ntBASIC4.29□□□□□ -1.72
VCPP55072 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC4.29□□□□□ -1.72
VCPP55072 VN1R79P-201ENST00000593540 513 ntBASIC4.29□□□□□ -1.72
VCPP55072 PCNP-208ENST00000627393 136 ntTSL 2 BASIC4.29□□□□□ -1.72
VCPP55072 U6.105-201ENST00000637379 88 ntBASIC4.29□□□□□ -1.72
VCPP55072 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
VCPP55072 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
VCPP55072 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC4.29□□□□□ -1.72
VCPP55072 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
VCPP55072 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC4.29□□□□□ -1.72
VCPP55072 MTND5P1-201ENST00000445440 1375 ntBASIC4.28□□□□□ -1.72
VCPP55072 EMCN-209ENST00000511970 1377 ntAPPRIS ALT2 TSL 2 BASIC4.28□□□□□ -1.72
VCPP55072 AC116667.1-201ENST00000604855 2072 ntBASIC4.28□□□□□ -1.72
VCPP55072 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC4.28□□□□□ -1.72
VCPP55072 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC4.28□□□□□ -1.72
VCPP55072 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC4.28□□□□□ -1.72
VCPP55072 RNVU1-14-201ENST00000384770 164 ntBASIC4.28□□□□□ -1.72
VCPP55072 RN7SKP156-201ENST00000410308 342 ntBASIC4.28□□□□□ -1.72
VCPP55072 SNORA57.3-201ENST00000411095 141 ntBASIC4.28□□□□□ -1.72
VCPP55072 PGBD4P8-201ENST00000412993 562 ntBASIC4.28□□□□□ -1.72
VCPP55072 AL391219.1-201ENST00000422570 483 ntBASIC4.28□□□□□ -1.72
VCPP55072 NPM1P34-201ENST00000428821 893 ntBASIC4.28□□□□□ -1.72
VCPP55072 MTCO1P52-201ENST00000433928 531 ntBASIC4.28□□□□□ -1.72
VCPP55072 LBX1-AS1-202ENST00000434878 418 ntTSL 5 BASIC4.28□□□□□ -1.72
VCPP55072 TPTE2P3-201ENST00000441562 1189 ntBASIC4.28□□□□□ -1.72
VCPP55072 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC4.28□□□□□ -1.72
VCPP55072 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC4.28□□□□□ -1.72
VCPP55072 PPIAP3-201ENST00000450588 505 ntBASIC4.28□□□□□ -1.72
VCPP55072 SNRPGP5-201ENST00000456003 220 ntBASIC4.28□□□□□ -1.72
VCPP55072 AL133477.1-201ENST00000457472 514 ntBASIC4.28□□□□□ -1.72
VCPP55072 RPL36AP13-201ENST00000457490 317 ntBASIC4.28□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 142.8 ms