Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 AC025445.1-201ENST00000502728 300 ntBASIC4.55□□□□□ -1.68
NR1H2P55055 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
NR1H2P55055 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC4.55□□□□□ -1.68
NR1H2P55055 RNA5SP373-201ENST00000517271 95 ntBASIC4.55□□□□□ -1.68
NR1H2P55055 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC4.55□□□□□ -1.68
NR1H2P55055 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC4.55□□□□□ -1.68
NR1H2P55055 AC023050.2-201ENST00000544968 387 ntBASIC4.55□□□□□ -1.68
NR1H2P55055 AC090502.2-201ENST00000549267 280 ntBASIC4.55□□□□□ -1.68
NR1H2P55055 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC4.55□□□□□ -1.68
NR1H2P55055 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC4.55□□□□□ -1.68
NR1H2P55055 NOP10-202ENST00000557912 436 ntTSL 2 BASIC4.55□□□□□ -1.68
NR1H2P55055 AL132657.2-201ENST00000564417 358 ntBASIC4.55□□□□□ -1.68
NR1H2P55055 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC4.55□□□□□ -1.68
NR1H2P55055 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC4.55□□□□□ -1.68
NR1H2P55055 AC011487.3-201ENST00000593607 453 ntBASIC4.55□□□□□ -1.68
NR1H2P55055 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC4.55□□□□□ -1.68
NR1H2P55055 AC073091.2-201ENST00000603205 907 ntBASIC4.55□□□□□ -1.68
NR1H2P55055 AC025811.1-201ENST00000604312 472 ntBASIC4.55□□□□□ -1.68
NR1H2P55055 U73479.1-201ENST00000618062 168 ntBASIC4.55□□□□□ -1.68
NR1H2P55055 DPY19L2P2-203ENST00000435536 1858 ntBASIC4.55□□□□□ -1.68
NR1H2P55055 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
NR1H2P55055 ZNF734P-201ENST00000419494 1534 ntBASIC4.55□□□□□ -1.68
NR1H2P55055 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
NR1H2P55055 MTND5P3-201ENST00000438536 1800 ntBASIC4.55□□□□□ -1.68
NR1H2P55055 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC4.55□□□□□ -1.68
NR1H2P55055 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
NR1H2P55055 SUPT16HP1-201ENST00000537175 3133 ntBASIC4.55□□□□□ -1.68
NR1H2P55055 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
NR1H2P55055 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
NR1H2P55055 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
NR1H2P55055 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
NR1H2P55055 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
NR1H2P55055 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
NR1H2P55055 MFSD4BP1-201ENST00000513330 1552 ntBASIC4.54□□□□□ -1.68
NR1H2P55055 CARF-203ENST00000414439 2099 ntTSL 2 BASIC4.54□□□□□ -1.68
NR1H2P55055 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
NR1H2P55055 OR52B1P-201ENST00000316506 909 ntBASIC4.54□□□□□ -1.68
NR1H2P55055 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
NR1H2P55055 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC4.54□□□□□ -1.68
NR1H2P55055 RNA5SP52-201ENST00000362448 134 ntBASIC4.54□□□□□ -1.68
NR1H2P55055 RNA5SP90-201ENST00000364801 99 ntBASIC4.54□□□□□ -1.68
NR1H2P55055 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
NR1H2P55055 TAF9BP1-201ENST00000396646 746 ntBASIC4.54□□□□□ -1.68
NR1H2P55055 EIF5P1-201ENST00000400019 1231 ntBASIC4.54□□□□□ -1.68
NR1H2P55055 RNA5SP104-201ENST00000410989 118 ntBASIC4.54□□□□□ -1.68
NR1H2P55055 AC016397.1-201ENST00000412463 242 ntBASIC4.54□□□□□ -1.68
NR1H2P55055 OR8G2P-201ENST00000412796 908 ntBASIC4.54□□□□□ -1.68
NR1H2P55055 AL008987.1-201ENST00000415528 237 ntBASIC4.54□□□□□ -1.68
NR1H2P55055 ATP6V1G1P7-201ENST00000415853 349 ntBASIC4.54□□□□□ -1.68
NR1H2P55055 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC4.54□□□□□ -1.68
NR1H2P55055 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC4.54□□□□□ -1.68
NR1H2P55055 AL360081.1-201ENST00000428299 555 ntBASIC4.54□□□□□ -1.68
NR1H2P55055 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC4.54□□□□□ -1.68
NR1H2P55055 RPL31P54-201ENST00000429803 370 ntBASIC4.54□□□□□ -1.68
NR1H2P55055 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC4.54□□□□□ -1.68
NR1H2P55055 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC4.54□□□□□ -1.68
NR1H2P55055 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC4.54□□□□□ -1.68
NR1H2P55055 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC4.54□□□□□ -1.68
NR1H2P55055 MTCO2P20-201ENST00000437339 673 ntBASIC4.54□□□□□ -1.68
NR1H2P55055 RPS29P10-201ENST00000439197 166 ntBASIC4.54□□□□□ -1.68
NR1H2P55055 AL450023.3-201ENST00000440592 271 ntBASIC4.54□□□□□ -1.68
NR1H2P55055 OR52J1P-201ENST00000450596 932 ntBASIC4.54□□□□□ -1.68
NR1H2P55055 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC4.54□□□□□ -1.68
NR1H2P55055 FGF7P3-201ENST00000454645 303 ntBASIC4.54□□□□□ -1.68
NR1H2P55055 SNORD108-201ENST00000459332 71 ntBASIC4.54□□□□□ -1.68
NR1H2P55055 RPS3AP41-201ENST00000462701 778 ntBASIC4.54□□□□□ -1.68
NR1H2P55055 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC4.54□□□□□ -1.68
NR1H2P55055 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
NR1H2P55055 AC108022.1-201ENST00000493466 478 ntBASIC4.54□□□□□ -1.68
NR1H2P55055 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC4.54□□□□□ -1.68
NR1H2P55055 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC4.54□□□□□ -1.68
NR1H2P55055 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC4.54□□□□□ -1.68
NR1H2P55055 AC109445.1-201ENST00000512356 383 ntBASIC4.54□□□□□ -1.68
NR1H2P55055 RNU4-60P-201ENST00000517239 135 ntBASIC4.54□□□□□ -1.68
NR1H2P55055 MTATP6P15-201ENST00000527233 835 ntBASIC4.54□□□□□ -1.68
NR1H2P55055 BRD9P1-201ENST00000529855 560 ntBASIC4.54□□□□□ -1.68
NR1H2P55055 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC4.54□□□□□ -1.68
NR1H2P55055 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC4.54□□□□□ -1.68
NR1H2P55055 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC4.54□□□□□ -1.68
NR1H2P55055 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC4.54□□□□□ -1.68
NR1H2P55055 CFL2-206ENST00000556161 546 ntTSL 4 BASIC4.54□□□□□ -1.68
NR1H2P55055 TRAV15-201ENST00000556680 249 ntBASIC4.54□□□□□ -1.68
NR1H2P55055 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC4.54□□□□□ -1.68
NR1H2P55055 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC4.54□□□□□ -1.68
NR1H2P55055 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
NR1H2P55055 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC4.54□□□□□ -1.68
NR1H2P55055 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC4.54□□□□□ -1.68
NR1H2P55055 AC097478.2-201ENST00000610572 514 ntBASIC4.54□□□□□ -1.68
NR1H2P55055 Z99129.2-201ENST00000619967 314 ntBASIC4.54□□□□□ -1.68
NR1H2P55055 AC091905.4-201ENST00000623432 202 ntBASIC4.54□□□□□ -1.68
NR1H2P55055 FAM26D-205ENST00000628083 1117 ntTSL 2 BASIC4.54□□□□□ -1.68
NR1H2P55055 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
NR1H2P55055 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
NR1H2P55055 EEF1A1P36-201ENST00000427807 1351 ntBASIC4.53□□□□□ -1.68
NR1H2P55055 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
NR1H2P55055 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
NR1H2P55055 AC130650.2-201ENST00000618736 2403 ntBASIC4.53□□□□□ -1.68
NR1H2P55055 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
NR1H2P55055 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
NR1H2P55055 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 112 ms