Protein–RNA interactions for Protein: P53667

LIMK1, LIM domain kinase 1, humanhuman

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1P53667 AC093801.2-201ENST00000503966 1050 ntBASIC4.38□□□□□ -1.71
LIMK1P53667 AC026726.1-201ENST00000512859 601 ntBASIC4.38□□□□□ -1.71
LIMK1P53667 AC010374.2-201ENST00000512933 535 ntBASIC4.38□□□□□ -1.71
LIMK1P53667 AC093535.1-201ENST00000515808 747 ntTSL 3 BASIC4.38□□□□□ -1.71
LIMK1P53667 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC4.38□□□□□ -1.71
LIMK1P53667 AC011853.2-201ENST00000526901 774 ntTSL 5 BASIC4.38□□□□□ -1.71
LIMK1P53667 AC019227.1-201ENST00000526902 510 ntBASIC4.38□□□□□ -1.71
LIMK1P53667 STX3-204ENST00000530221 534 ntTSL 5 BASIC4.38□□□□□ -1.71
LIMK1P53667 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC4.38□□□□□ -1.71
LIMK1P53667 AC087477.6-201ENST00000559595 843 ntBASIC4.38□□□□□ -1.71
LIMK1P53667 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC4.38□□□□□ -1.71
LIMK1P53667 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC4.38□□□□□ -1.71
LIMK1P53667 Z82195.1-201ENST00000604558 398 ntBASIC4.38□□□□□ -1.71
LIMK1P53667 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC4.38□□□□□ -1.71
LIMK1P53667 AC069200.1-201ENST00000609511 323 ntBASIC4.38□□□□□ -1.71
LIMK1P53667 VN1R74P-201ENST00000613259 503 ntBASIC4.38□□□□□ -1.71
LIMK1P53667 AC006213.4-201ENST00000616184 634 ntBASIC4.38□□□□□ -1.71
LIMK1P53667 MIR6875-201ENST00000617506 72 ntBASIC4.38□□□□□ -1.71
LIMK1P53667 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
LIMK1P53667 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC4.38□□□□□ -1.71
LIMK1P53667 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
LIMK1P53667 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
LIMK1P53667 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
LIMK1P53667 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
LIMK1P53667 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC4.37□□□□□ -1.71
LIMK1P53667 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC4.37□□□□□ -1.71
LIMK1P53667 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC4.37□□□□□ -1.71
LIMK1P53667 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
LIMK1P53667 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
LIMK1P53667 HSPD1P14-201ENST00000432666 1618 ntBASIC4.37□□□□□ -1.71
LIMK1P53667 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
LIMK1P53667 STATH-202ENST00000381060 534 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
LIMK1P53667 SNORA9-201ENST00000384215 133 ntBASIC4.37□□□□□ -1.71
LIMK1P53667 RPL7P27-201ENST00000403775 720 ntBASIC4.37□□□□□ -1.71
LIMK1P53667 ARL4AP5-201ENST00000404372 599 ntBASIC4.37□□□□□ -1.71
LIMK1P53667 TRIM60P5Y-201ENST00000413946 574 ntBASIC4.37□□□□□ -1.71
LIMK1P53667 TAF13P2-201ENST00000416876 286 ntBASIC4.37□□□□□ -1.71
LIMK1P53667 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC4.37□□□□□ -1.71
LIMK1P53667 YME1L1P1-201ENST00000429435 297 ntBASIC4.37□□□□□ -1.71
LIMK1P53667 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC4.37□□□□□ -1.71
LIMK1P53667 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC4.37□□□□□ -1.71
LIMK1P53667 AL353743.2-203ENST00000443630 492 ntTSL 3 BASIC4.37□□□□□ -1.71
LIMK1P53667 ANKRD30BP3-201ENST00000444850 1070 ntBASIC4.37□□□□□ -1.71
LIMK1P53667 SEPT14P24-201ENST00000447236 180 ntBASIC4.37□□□□□ -1.71
LIMK1P53667 TVP23BP2-201ENST00000455082 615 ntBASIC4.37□□□□□ -1.71
LIMK1P53667 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC4.37□□□□□ -1.71
LIMK1P53667 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC4.37□□□□□ -1.71
LIMK1P53667 RPL37P6-202ENST00000464216 403 ntBASIC4.37□□□□□ -1.71
LIMK1P53667 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
LIMK1P53667 AC008958.1-201ENST00000511047 682 ntBASIC4.37□□□□□ -1.71
LIMK1P53667 PTGES3P3-201ENST00000511479 482 ntBASIC4.37□□□□□ -1.71
LIMK1P53667 AC008494.2-201ENST00000514544 370 ntBASIC4.37□□□□□ -1.71
LIMK1P53667 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC4.37□□□□□ -1.71
LIMK1P53667 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC4.37□□□□□ -1.71
LIMK1P53667 CYCSP28-201ENST00000534284 321 ntBASIC4.37□□□□□ -1.71
LIMK1P53667 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC4.37□□□□□ -1.71
LIMK1P53667 AC068768.1-204ENST00000544890 796 ntTSL 4 BASIC4.37□□□□□ -1.71
LIMK1P53667 AC069240.1-201ENST00000548774 375 ntBASIC4.37□□□□□ -1.71
LIMK1P53667 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC4.37□□□□□ -1.71
LIMK1P53667 RN7SL703P-201ENST00000578485 302 ntBASIC4.37□□□□□ -1.71
LIMK1P53667 AC007993.3-202ENST00000585329 725 ntTSL 5 BASIC4.37□□□□□ -1.71
LIMK1P53667 VN1R87P-201ENST00000596706 487 ntBASIC4.37□□□□□ -1.71
LIMK1P53667 VN1R88P-201ENST00000596787 292 ntBASIC4.37□□□□□ -1.71
LIMK1P53667 AL049634.3-201ENST00000604968 457 ntBASIC4.37□□□□□ -1.71
LIMK1P53667 AP002802.2-201ENST00000605877 235 ntBASIC4.37□□□□□ -1.71
LIMK1P53667 RNU4-89P-201ENST00000607443 133 ntBASIC4.37□□□□□ -1.71
LIMK1P53667 AC092953.2-201ENST00000608000 699 ntBASIC4.37□□□□□ -1.71
LIMK1P53667 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC4.37□□□□□ -1.71
LIMK1P53667 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC4.37□□□□□ -1.71
LIMK1P53667 AC006065.5-201ENST00000623427 349 ntBASIC4.37□□□□□ -1.71
LIMK1P53667 AL356118.1-201ENST00000635272 1078 ntBASIC4.37□□□□□ -1.71
LIMK1P53667 MIR4496-201ENST00000635896 61 ntBASIC4.37□□□□□ -1.71
LIMK1P53667 AC139713.2-210ENST00000641741 992 ntBASIC4.37□□□□□ -1.71
LIMK1P53667 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC4.37□□□□□ -1.71
LIMK1P53667 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC4.37□□□□□ -1.71
LIMK1P53667 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
LIMK1P53667 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC4.37□□□□□ -1.71
LIMK1P53667 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
LIMK1P53667 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
LIMK1P53667 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC4.37□□□□□ -1.71
LIMK1P53667 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC4.37□□□□□ -1.71
LIMK1P53667 SUPT16HP1-201ENST00000537175 3133 ntBASIC4.37□□□□□ -1.71
LIMK1P53667 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
LIMK1P53667 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
LIMK1P53667 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
LIMK1P53667 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
LIMK1P53667 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.36□□□□□ -1.71
LIMK1P53667 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC4.36□□□□□ -1.71
LIMK1P53667 RNU6-1257P-201ENST00000384625 110 ntBASIC4.36□□□□□ -1.71
LIMK1P53667 AC097374.1-203ENST00000400783 485 ntBASIC4.36□□□□□ -1.71
LIMK1P53667 RNU6-77P-201ENST00000410554 91 ntBASIC4.36□□□□□ -1.71
LIMK1P53667 RNU6-272P-201ENST00000411028 104 ntBASIC4.36□□□□□ -1.71
LIMK1P53667 AC092638.1-201ENST00000411966 1275 ntBASIC4.36□□□□□ -1.71
LIMK1P53667 OR2X1P-201ENST00000421144 687 ntBASIC4.36□□□□□ -1.71
LIMK1P53667 ARF4P4-201ENST00000439608 520 ntBASIC4.36□□□□□ -1.71
LIMK1P53667 ISCUP1-201ENST00000454451 448 ntBASIC4.36□□□□□ -1.71
LIMK1P53667 CDC42P1-201ENST00000456658 548 ntBASIC4.36□□□□□ -1.71
LIMK1P53667 RPL7P15-201ENST00000461190 712 ntBASIC4.36□□□□□ -1.71
LIMK1P53667 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC4.36□□□□□ -1.71
LIMK1P53667 AC069306.1-201ENST00000507006 843 ntBASIC4.36□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 123.5 ms