Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 MTCO3P16-201ENST00000454456 754 ntBASIC4.05□□□□□ -1.76
NUP98P52948 MTND6P32-201ENST00000457611 483 ntBASIC4.05□□□□□ -1.76
NUP98P52948 DWORF-201ENST00000489090 873 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
NUP98P52948 RPL7P47-201ENST00000497299 556 ntBASIC4.05□□□□□ -1.76
NUP98P52948 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC4.05□□□□□ -1.76
NUP98P52948 RN7SKP116-201ENST00000516902 319 ntBASIC4.05□□□□□ -1.76
NUP98P52948 MIR4672-201ENST00000583126 81 ntBASIC4.05□□□□□ -1.76
NUP98P52948 AL162574.2-201ENST00000614618 657 ntBASIC4.05□□□□□ -1.76
NUP98P52948 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC4.04□□□□□ -1.76
NUP98P52948 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC4.04□□□□□ -1.76
NUP98P52948 MDM2-201ENST00000258148 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
NUP98P52948 HSPA8P17-201ENST00000427029 1382 ntBASIC4.04□□□□□ -1.76
NUP98P52948 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC4.04□□□□□ -1.76
NUP98P52948 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC4.04□□□□□ -1.76
NUP98P52948 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC4.04□□□□□ -1.76
NUP98P52948 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
NUP98P52948 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC4.04□□□□□ -1.76
NUP98P52948 AC126124.2-201ENST00000413542 321 ntBASIC4.04□□□□□ -1.76
NUP98P52948 RPL35AP12-201ENST00000425362 338 ntBASIC4.04□□□□□ -1.76
NUP98P52948 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC4.04□□□□□ -1.76
NUP98P52948 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC4.04□□□□□ -1.76
NUP98P52948 AC020893.1-201ENST00000502452 580 ntBASIC4.04□□□□□ -1.76
NUP98P52948 SPINK13-202ENST00000511106 661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
NUP98P52948 GLIPR1L1-204ENST00000548623 484 ntTSL 3 BASIC4.04□□□□□ -1.76
NUP98P52948 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
NUP98P52948 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC4.04□□□□□ -1.76
NUP98P52948 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
NUP98P52948 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC4.04□□□□□ -1.76
NUP98P52948 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
NUP98P52948 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC4.03□□□□□ -1.76
NUP98P52948 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
NUP98P52948 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
NUP98P52948 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC4.03□□□□□ -1.76
NUP98P52948 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC4.03□□□□□ -1.76
NUP98P52948 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
NUP98P52948 RPS24P12-201ENST00000402084 394 ntBASIC4.03□□□□□ -1.76
NUP98P52948 AL024507.1-201ENST00000412741 274 ntBASIC4.03□□□□□ -1.76
NUP98P52948 AC008264.1-201ENST00000447612 367 ntBASIC4.03□□□□□ -1.76
NUP98P52948 DNAJC19P1-201ENST00000455312 319 ntBASIC4.03□□□□□ -1.76
NUP98P52948 RPS29P26-201ENST00000477483 171 ntBASIC4.03□□□□□ -1.76
NUP98P52948 SUMO2P4-201ENST00000504193 276 ntBASIC4.03□□□□□ -1.76
NUP98P52948 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC4.03□□□□□ -1.76
NUP98P52948 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC4.03□□□□□ -1.76
NUP98P52948 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC4.03□□□□□ -1.76
NUP98P52948 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC4.03□□□□□ -1.76
NUP98P52948 CR392039.4-201ENST00000624968 501 ntBASIC4.03□□□□□ -1.76
NUP98P52948 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC4.03□□□□□ -1.76
NUP98P52948 AC092435.3-201ENST00000565538 3654 ntBASIC4.03□□□□□ -1.76
NUP98P52948 CEP170P1-201ENST00000502249 4587 ntBASIC4.03□□□□□ -1.76
NUP98P52948 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC4.03□□□□□ -1.76
NUP98P52948 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
NUP98P52948 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
NUP98P52948 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
NUP98P52948 AL121834.1-202ENST00000404494 277 ntBASIC4.02□□□□□ -1.77
NUP98P52948 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC4.02□□□□□ -1.77
NUP98P52948 AC092447.2-201ENST00000435487 669 ntBASIC4.02□□□□□ -1.77
NUP98P52948 AC006028.1-201ENST00000438379 402 ntBASIC4.02□□□□□ -1.77
NUP98P52948 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC4.02□□□□□ -1.77
NUP98P52948 RNF148-202ENST00000447240 839 ntTSL 2 BASIC4.02□□□□□ -1.77
NUP98P52948 RPL37P4-201ENST00000448908 268 ntBASIC4.02□□□□□ -1.77
NUP98P52948 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC4.02□□□□□ -1.77
NUP98P52948 AC138409.2-202ENST00000507274 458 ntBASIC4.02□□□□□ -1.77
NUP98P52948 PCBP2P3-201ENST00000509726 843 ntBASIC4.02□□□□□ -1.77
NUP98P52948 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
NUP98P52948 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC4.02□□□□□ -1.77
NUP98P52948 AL157938.2-208ENST00000590461 877 ntTSL 5 BASIC4.02□□□□□ -1.77
NUP98P52948 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
NUP98P52948 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
NUP98P52948 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
NUP98P52948 ODAM-201ENST00000396094 1319 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
NUP98P52948 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
NUP98P52948 GSTA1-201ENST00000334575 1019 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
NUP98P52948 AC073325.2-201ENST00000339545 159 ntBASIC4.02□□□□□ -1.77
NUP98P52948 MIR30E-201ENST00000362104 92 ntBASIC4.02□□□□□ -1.77
NUP98P52948 ZNF603P-201ENST00000405613 487 ntBASIC4.02□□□□□ -1.77
NUP98P52948 RNF19BPX-201ENST00000426224 625 ntBASIC4.02□□□□□ -1.77
NUP98P52948 RPL23AP67-201ENST00000465341 474 ntBASIC4.02□□□□□ -1.77
NUP98P52948 LINC02506-201ENST00000513211 734 ntTSL 3 BASIC4.02□□□□□ -1.77
NUP98P52948 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC4.02□□□□□ -1.77
NUP98P52948 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
NUP98P52948 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC4.01□□□□□ -1.77
NUP98P52948 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
NUP98P52948 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC4.01□□□□□ -1.77
NUP98P52948 TSPAN8-201ENST00000247829 1227 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
NUP98P52948 Y_RNA.500-201ENST00000384466 111 ntBASIC4.01□□□□□ -1.77
NUP98P52948 RNU1-89P-201ENST00000384592 164 ntBASIC4.01□□□□□ -1.77
NUP98P52948 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
NUP98P52948 AP000859.1-201ENST00000525536 307 ntBASIC4.01□□□□□ -1.77
NUP98P52948 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC4.01□□□□□ -1.77
NUP98P52948 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC4.01□□□□□ -1.77
NUP98P52948 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC4.01□□□□□ -1.77
NUP98P52948 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC4.01□□□□□ -1.77
NUP98P52948 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC4.01□□□□□ -1.77
NUP98P52948 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
NUP98P52948 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC4.01□□□□□ -1.77
NUP98P52948 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
NUP98P52948 AL445213.1-201ENST00000412589 747 ntBASIC4□□□□□ -1.77
NUP98P52948 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC4□□□□□ -1.77
NUP98P52948 AL513175.1-201ENST00000431492 780 ntBASIC4□□□□□ -1.77
NUP98P52948 RPL12P26-201ENST00000452430 487 ntBASIC4□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 111.2 ms