Protein–RNA interactions for Protein: P52655

GTF2A1, Transcription initiation factor IIA subunit 1, humanhuman

Predicted RBP Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1P52655 AC139713.2-214ENST00000642059 1811 ntBASIC3.43□□□□□ -1.86
GTF2A1P52655 RNA5SP443-201ENST00000363083 132 ntBASIC3.43□□□□□ -1.86
GTF2A1P52655 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC3.43□□□□□ -1.86
GTF2A1P52655 AC092642.1-201ENST00000392417 425 ntBASIC3.43□□□□□ -1.86
GTF2A1P52655 AL590806.1-201ENST00000415818 853 ntBASIC3.43□□□□□ -1.86
GTF2A1P52655 HMGB3P20-201ENST00000417997 600 ntBASIC3.43□□□□□ -1.86
GTF2A1P52655 AC006455.6-201ENST00000426192 893 ntBASIC3.43□□□□□ -1.86
GTF2A1P52655 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC3.43□□□□□ -1.86
GTF2A1P52655 SAR1AP4-201ENST00000429225 591 ntBASIC3.43□□□□□ -1.86
GTF2A1P52655 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC3.43□□□□□ -1.86
GTF2A1P52655 HMGB1P12-201ENST00000438594 598 ntBASIC3.43□□□□□ -1.86
GTF2A1P52655 Z95152.1-201ENST00000453556 656 ntBASIC3.43□□□□□ -1.86
GTF2A1P52655 AC011276.1-201ENST00000469688 323 ntBASIC3.43□□□□□ -1.86
GTF2A1P52655 AC084357.1-201ENST00000473404 255 ntBASIC3.43□□□□□ -1.86
GTF2A1P52655 RPS4XP13-201ENST00000483219 789 ntBASIC3.43□□□□□ -1.86
GTF2A1P52655 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC3.43□□□□□ -1.86
GTF2A1P52655 LINC01332-201ENST00000506612 502 ntTSL 4 BASIC3.43□□□□□ -1.86
GTF2A1P52655 AC098799.2-201ENST00000509466 868 ntBASIC3.43□□□□□ -1.86
GTF2A1P52655 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC3.43□□□□□ -1.86
GTF2A1P52655 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC3.43□□□□□ -1.86
GTF2A1P52655 LINC00500-201ENST00000515860 539 ntTSL 4 BASIC3.43□□□□□ -1.86
GTF2A1P52655 TRMT10BP1-201ENST00000519377 943 ntBASIC3.43□□□□□ -1.86
GTF2A1P52655 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC3.43□□□□□ -1.86
GTF2A1P52655 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC3.43□□□□□ -1.86
GTF2A1P52655 AC239860.2-201ENST00000525886 270 ntBASIC3.43□□□□□ -1.86
GTF2A1P52655 CYCSP29-201ENST00000533731 318 ntBASIC3.43□□□□□ -1.86
GTF2A1P52655 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC3.43□□□□□ -1.86
GTF2A1P52655 AL355922.5-201ENST00000553534 351 ntTSL 3 BASIC3.43□□□□□ -1.86
GTF2A1P52655 RN7SL753P-201ENST00000581238 290 ntBASIC3.43□□□□□ -1.86
GTF2A1P52655 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
GTF2A1P52655 AC012119.1-201ENST00000603184 222 ntBASIC3.43□□□□□ -1.86
GTF2A1P52655 LINC02341-201ENST00000637043 824 ntTSL 3 BASIC3.43□□□□□ -1.86
GTF2A1P52655 FTX-214ENST00000638437 12267 ntTSL 5 BASIC3.43□□□□□ -1.86
GTF2A1P52655 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
GTF2A1P52655 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC3.43□□□□□ -1.86
GTF2A1P52655 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
GTF2A1P52655 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.42□□□□□ -1.86
GTF2A1P52655 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.42□□□□□ -1.86
GTF2A1P52655 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.42□□□□□ -1.86
GTF2A1P52655 LARP1BP1-201ENST00000506036 1359 ntBASIC3.42□□□□□ -1.86
GTF2A1P52655 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC3.42□□□□□ -1.86
GTF2A1P52655 AC009487.2-201ENST00000420969 6821 ntBASIC3.42□□□□□ -1.86
GTF2A1P52655 IGKV7-3-201ENST00000357453 298 ntBASIC3.42□□□□□ -1.86
GTF2A1P52655 RNU6-398P-201ENST00000384143 109 ntBASIC3.42□□□□□ -1.86
GTF2A1P52655 AL354719.1-201ENST00000406535 843 ntBASIC3.42□□□□□ -1.86
GTF2A1P52655 ELOCP19-201ENST00000411919 318 ntBASIC3.42□□□□□ -1.86
GTF2A1P52655 TPT1P2-201ENST00000413105 503 ntBASIC3.42□□□□□ -1.86
GTF2A1P52655 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC3.42□□□□□ -1.86
GTF2A1P52655 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC3.42□□□□□ -1.86
GTF2A1P52655 G6PC2-203ENST00000421979 494 ntTSL 3 BASIC3.42□□□□□ -1.86
GTF2A1P52655 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC3.42□□□□□ -1.86
GTF2A1P52655 RPL23AP82-202ENST00000427528 469 ntBASIC3.42□□□□□ -1.86
GTF2A1P52655 AL590103.1-201ENST00000434488 307 ntBASIC3.42□□□□□ -1.86
GTF2A1P52655 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC3.42□□□□□ -1.86
GTF2A1P52655 TBCAP1-201ENST00000436520 327 ntBASIC3.42□□□□□ -1.86
GTF2A1P52655 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
GTF2A1P52655 NOTCH2P1-201ENST00000443481 624 ntBASIC3.42□□□□□ -1.86
GTF2A1P52655 RPL23AP20-201ENST00000447965 421 ntBASIC3.42□□□□□ -1.86
GTF2A1P52655 LINC02527-201ENST00000449069 762 ntTSL 3 BASIC3.42□□□□□ -1.86
GTF2A1P52655 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC3.42□□□□□ -1.86
GTF2A1P52655 AC099563.1-201ENST00000456086 418 ntBASIC3.42□□□□□ -1.86
GTF2A1P52655 CENPBD1P1-201ENST00000464061 469 ntBASIC3.42□□□□□ -1.86
GTF2A1P52655 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC3.42□□□□□ -1.86
GTF2A1P52655 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC3.42□□□□□ -1.86
GTF2A1P52655 AC087369.1-201ENST00000520775 996 ntBASIC3.42□□□□□ -1.86
GTF2A1P52655 LECT2-205ENST00000522943 574 ntTSL 3 BASIC3.42□□□□□ -1.86
GTF2A1P52655 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
GTF2A1P52655 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC3.42□□□□□ -1.86
GTF2A1P52655 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
GTF2A1P52655 AC013244.1-201ENST00000604279 193 ntBASIC3.42□□□□□ -1.86
GTF2A1P52655 AC091167.4-201ENST00000605079 184 ntBASIC3.42□□□□□ -1.86
GTF2A1P52655 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC3.42□□□□□ -1.86
GTF2A1P52655 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC3.42□□□□□ -1.86
GTF2A1P52655 AC073476.4-201ENST00000628409 72 ntBASIC3.42□□□□□ -1.86
GTF2A1P52655 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC3.42□□□□□ -1.86
GTF2A1P52655 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
GTF2A1P52655 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC3.41□□□□□ -1.86
GTF2A1P52655 CDY3P-201ENST00000454543 1618 ntBASIC3.41□□□□□ -1.86
GTF2A1P52655 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC3.41□□□□□ -1.86
GTF2A1P52655 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.41□□□□□ -1.86
GTF2A1P52655 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC3.41□□□□□ -1.86
GTF2A1P52655 MIR383-201ENST00000362257 73 ntBASIC3.41□□□□□ -1.86
GTF2A1P52655 MIR92A2-201ENST00000385299 75 ntBASIC3.41□□□□□ -1.86
GTF2A1P52655 RNA5SP105-201ENST00000391123 113 ntBASIC3.41□□□□□ -1.86
GTF2A1P52655 MTND4P13-201ENST00000402078 1023 ntBASIC3.41□□□□□ -1.86
GTF2A1P52655 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.41□□□□□ -1.86
GTF2A1P52655 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC3.41□□□□□ -1.86
GTF2A1P52655 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
GTF2A1P52655 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC3.41□□□□□ -1.86
GTF2A1P52655 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC3.41□□□□□ -1.86
GTF2A1P52655 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC3.41□□□□□ -1.86
GTF2A1P52655 RPL7AP52-201ENST00000458096 790 ntBASIC3.41□□□□□ -1.86
GTF2A1P52655 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC3.41□□□□□ -1.86
GTF2A1P52655 RN7SL459P-201ENST00000481078 302 ntBASIC3.41□□□□□ -1.86
GTF2A1P52655 LINC02224-201ENST00000505706 584 ntTSL 4 BASIC3.41□□□□□ -1.86
GTF2A1P52655 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC3.41□□□□□ -1.86
GTF2A1P52655 LINC02057-202ENST00000511794 577 ntTSL 3 BASIC3.41□□□□□ -1.86
GTF2A1P52655 RNA5SP76-201ENST00000516277 87 ntBASIC3.41□□□□□ -1.86
GTF2A1P52655 RNU1-143P-201ENST00000516296 146 ntBASIC3.41□□□□□ -1.86
GTF2A1P52655 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC3.41□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 110.2 ms