Protein–RNA interactions for Protein: P51610

HCFC1, Host cell factor 1, humanhuman

Predictions only

Length 2,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1P51610 AL513175.2-201ENST00000422071 443 ntBASIC3.6□□□□□ -1.83
HCFC1P51610 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC3.6□□□□□ -1.83
HCFC1P51610 AL592437.1-201ENST00000443781 492 ntBASIC3.6□□□□□ -1.83
HCFC1P51610 AC104306.1-201ENST00000449702 371 ntBASIC3.6□□□□□ -1.83
HCFC1P51610 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC3.6□□□□□ -1.83
HCFC1P51610 HSPE1P22-201ENST00000456856 327 ntBASIC3.6□□□□□ -1.83
HCFC1P51610 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC3.6□□□□□ -1.83
HCFC1P51610 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC3.6□□□□□ -1.83
HCFC1P51610 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC3.6□□□□□ -1.83
HCFC1P51610 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC3.6□□□□□ -1.83
HCFC1P51610 AC006499.5-201ENST00000505037 514 ntBASIC3.6□□□□□ -1.83
HCFC1P51610 AC010460.1-201ENST00000507087 466 ntBASIC3.6□□□□□ -1.83
HCFC1P51610 KRT19P6-201ENST00000510983 209 ntBASIC3.6□□□□□ -1.83
HCFC1P51610 RNU6-352P-201ENST00000516908 107 ntBASIC3.6□□□□□ -1.83
HCFC1P51610 VBP1-203ENST00000535916 944 ntTSL 2 BASIC3.6□□□□□ -1.83
HCFC1P51610 AC025260.1-201ENST00000548858 430 ntBASIC3.6□□□□□ -1.83
HCFC1P51610 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC3.6□□□□□ -1.83
HCFC1P51610 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC3.6□□□□□ -1.83
HCFC1P51610 AL137072.1-201ENST00000603444 466 ntBASIC3.6□□□□□ -1.83
HCFC1P51610 AC104662.1-201ENST00000604448 511 ntBASIC3.6□□□□□ -1.83
HCFC1P51610 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
HCFC1P51610 AL049634.3-201ENST00000604968 457 ntBASIC3.6□□□□□ -1.83
HCFC1P51610 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
HCFC1P51610 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
HCFC1P51610 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
HCFC1P51610 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
HCFC1P51610 AC013470.4-201ENST00000619978 986 ntBASIC3.6□□□□□ -1.83
HCFC1P51610 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
HCFC1P51610 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
HCFC1P51610 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
HCFC1P51610 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC3.6□□□□□ -1.83
HCFC1P51610 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC3.6□□□□□ -1.83
HCFC1P51610 AC068254.2-201ENST00000623938 3577 ntBASIC3.6□□□□□ -1.83
HCFC1P51610 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
HCFC1P51610 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC3.6□□□□□ -1.83
HCFC1P51610 MAPK10-303ENST00000641324 3959 ntBASIC3.6□□□□□ -1.83
HCFC1P51610 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC3.6□□□□□ -1.83
HCFC1P51610 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
HCFC1P51610 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
HCFC1P51610 LDHAL6CP-202ENST00000550738 3224 ntBASIC3.6□□□□□ -1.83
HCFC1P51610 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
HCFC1P51610 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC3.6□□□□□ -1.83
HCFC1P51610 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
HCFC1P51610 RNA5SP399-201ENST00000364003 117 ntBASIC3.6□□□□□ -1.83
HCFC1P51610 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC3.6□□□□□ -1.83
HCFC1P51610 AL080315.1-201ENST00000406055 466 ntBASIC3.6□□□□□ -1.83
HCFC1P51610 RNA5SP306-201ENST00000411087 107 ntBASIC3.6□□□□□ -1.83
HCFC1P51610 AC013404.1-201ENST00000413068 249 ntBASIC3.6□□□□□ -1.83
HCFC1P51610 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
HCFC1P51610 RPL22P18-201ENST00000417197 377 ntBASIC3.6□□□□□ -1.83
HCFC1P51610 MTND4P3-201ENST00000417829 541 ntBASIC3.6□□□□□ -1.83
HCFC1P51610 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC3.6□□□□□ -1.83
HCFC1P51610 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC3.6□□□□□ -1.83
HCFC1P51610 MTND2P16-201ENST00000419987 799 ntBASIC3.6□□□□□ -1.83
HCFC1P51610 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC3.6□□□□□ -1.83
HCFC1P51610 AC246680.2-201ENST00000422106 389 ntBASIC3.6□□□□□ -1.83
HCFC1P51610 DPY19L1P2-201ENST00000426647 915 ntBASIC3.6□□□□□ -1.83
HCFC1P51610 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC3.6□□□□□ -1.83
HCFC1P51610 EEF1A1P39-201ENST00000440791 250 ntBASIC3.6□□□□□ -1.83
HCFC1P51610 GEMIN8P3-201ENST00000445417 720 ntBASIC3.6□□□□□ -1.83
HCFC1P51610 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC3.6□□□□□ -1.83
HCFC1P51610 AC113430.1-201ENST00000506872 718 ntBASIC3.6□□□□□ -1.83
HCFC1P51610 AC008565.1-201ENST00000509046 885 ntBASIC3.6□□□□□ -1.83
HCFC1P51610 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC3.6□□□□□ -1.83
HCFC1P51610 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC3.6□□□□□ -1.83
HCFC1P51610 NAT2-202ENST00000520116 716 ntTSL 3 BASIC3.6□□□□□ -1.83
HCFC1P51610 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC3.6□□□□□ -1.83
HCFC1P51610 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC3.6□□□□□ -1.83
HCFC1P51610 AP000619.3-201ENST00000535634 1127 ntBASIC3.6□□□□□ -1.83
HCFC1P51610 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC3.6□□□□□ -1.83
HCFC1P51610 AC011611.5-201ENST00000552477 578 ntBASIC3.6□□□□□ -1.83
HCFC1P51610 AL132857.1-201ENST00000555180 708 ntBASIC3.6□□□□□ -1.83
HCFC1P51610 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC3.6□□□□□ -1.83
HCFC1P51610 AL138721.1-201ENST00000616756 179 ntBASIC3.6□□□□□ -1.83
HCFC1P51610 AC023509.5-201ENST00000617434 807 ntBASIC3.6□□□□□ -1.83
HCFC1P51610 AC138907.10-201ENST00000623708 983 ntBASIC3.6□□□□□ -1.83
HCFC1P51610 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
HCFC1P51610 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC3.59□□□□□ -1.83
HCFC1P51610 LINC01355-201ENST00000566551 5444 ntBASIC3.59□□□□□ -1.83
HCFC1P51610 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
HCFC1P51610 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC3.59□□□□□ -1.83
HCFC1P51610 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
HCFC1P51610 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
HCFC1P51610 AL355578.1-201ENST00000607405 1328 ntBASIC3.59□□□□□ -1.83
HCFC1P51610 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC3.59□□□□□ -1.83
HCFC1P51610 AC017007.4-201ENST00000503353 1352 ntBASIC3.59□□□□□ -1.83
HCFC1P51610 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
HCFC1P51610 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
HCFC1P51610 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
HCFC1P51610 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
HCFC1P51610 MIR449B-201ENST00000384995 97 ntBASIC3.59□□□□□ -1.83
HCFC1P51610 RNU6-1320P-201ENST00000390838 107 ntBASIC3.59□□□□□ -1.83
HCFC1P51610 RNU6-1269P-201ENST00000391139 107 ntBASIC3.59□□□□□ -1.83
HCFC1P51610 RNU11-4P-201ENST00000391149 133 ntBASIC3.59□□□□□ -1.83
HCFC1P51610 AL078604.1-201ENST00000404609 466 ntBASIC3.59□□□□□ -1.83
HCFC1P51610 MIR1911-201ENST00000410783 80 ntBASIC3.59□□□□□ -1.83
HCFC1P51610 AC092745.2-202ENST00000411880 369 ntBASIC3.59□□□□□ -1.83
HCFC1P51610 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC3.59□□□□□ -1.83
HCFC1P51610 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC3.59□□□□□ -1.83
HCFC1P51610 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC3.59□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 114.1 ms