Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
NKX2-1P43699 AC067945.1-201ENST00000342609 618 ntBASIC3.77□□□□□ -1.81
NKX2-1P43699 RNA5SP52-201ENST00000362448 134 ntBASIC3.77□□□□□ -1.81
NKX2-1P43699 RNU4-40P-201ENST00000364351 143 ntBASIC3.77□□□□□ -1.81
NKX2-1P43699 RNA5SP455-201ENST00000365190 119 ntBASIC3.77□□□□□ -1.81
NKX2-1P43699 RNU1-44P-201ENST00000384453 163 ntBASIC3.77□□□□□ -1.81
NKX2-1P43699 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
NKX2-1P43699 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC3.77□□□□□ -1.81
NKX2-1P43699 RPS24P12-201ENST00000402084 394 ntBASIC3.77□□□□□ -1.81
NKX2-1P43699 VN1R8P-201ENST00000407739 893 ntBASIC3.77□□□□□ -1.81
NKX2-1P43699 RNU6ATAC21P-201ENST00000408656 126 ntBASIC3.77□□□□□ -1.81
NKX2-1P43699 RPL31-204ENST00000409038 817 ntTSL 2 BASIC3.77□□□□□ -1.81
NKX2-1P43699 AL136133.1-201ENST00000413694 376 ntBASIC3.77□□□□□ -1.81
NKX2-1P43699 AC004987.3-201ENST00000413879 771 ntBASIC3.77□□□□□ -1.81
NKX2-1P43699 UBTFL3-201ENST00000418934 1024 ntBASIC3.77□□□□□ -1.81
NKX2-1P43699 GNRH1-202ENST00000421054 470 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
NKX2-1P43699 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC3.77□□□□□ -1.81
NKX2-1P43699 SDCBPP2-201ENST00000424643 885 ntBASIC3.77□□□□□ -1.81
NKX2-1P43699 AC073335.1-201ENST00000427776 363 ntBASIC3.77□□□□□ -1.81
NKX2-1P43699 TXNL1P1-201ENST00000429528 554 ntBASIC3.77□□□□□ -1.81
NKX2-1P43699 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC3.77□□□□□ -1.81
NKX2-1P43699 AL163193.1-201ENST00000444895 788 ntBASIC3.77□□□□□ -1.81
NKX2-1P43699 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC3.77□□□□□ -1.81
NKX2-1P43699 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
NKX2-1P43699 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC3.77□□□□□ -1.81
NKX2-1P43699 SLC25A18P1-201ENST00000449385 454 ntBASIC3.77□□□□□ -1.81
NKX2-1P43699 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC3.77□□□□□ -1.81
NKX2-1P43699 TRBV26-201ENST00000456572 344 ntBASIC3.77□□□□□ -1.81
NKX2-1P43699 RPL23AP56-201ENST00000460778 453 ntBASIC3.77□□□□□ -1.81
NKX2-1P43699 AC010301.1-201ENST00000473936 355 ntBASIC3.77□□□□□ -1.81
NKX2-1P43699 UBTFL6-201ENST00000477929 1024 ntBASIC3.77□□□□□ -1.81
NKX2-1P43699 AC072052.1-201ENST00000496556 306 ntBASIC3.77□□□□□ -1.81
NKX2-1P43699 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC3.77□□□□□ -1.81
NKX2-1P43699 PDLIM1P4-201ENST00000504327 1006 ntBASIC3.77□□□□□ -1.81
NKX2-1P43699 AC104090.1-201ENST00000506341 1171 ntBASIC3.77□□□□□ -1.81
NKX2-1P43699 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC3.77□□□□□ -1.81
NKX2-1P43699 AC097515.1-202ENST00000511818 371 ntTSL 3 BASIC3.77□□□□□ -1.81
NKX2-1P43699 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC3.77□□□□□ -1.81
NKX2-1P43699 AC015795.1-201ENST00000513669 327 ntBASIC3.77□□□□□ -1.81
NKX2-1P43699 AC016065.2-201ENST00000514530 444 ntBASIC3.77□□□□□ -1.81
NKX2-1P43699 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC3.77□□□□□ -1.81
NKX2-1P43699 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC3.77□□□□□ -1.81
NKX2-1P43699 ZNF705CP-201ENST00000530515 889 ntBASIC3.77□□□□□ -1.81
NKX2-1P43699 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
NKX2-1P43699 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC3.77□□□□□ -1.81
NKX2-1P43699 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC3.77□□□□□ -1.81
NKX2-1P43699 RN7SL802P-201ENST00000577858 299 ntBASIC3.77□□□□□ -1.81
NKX2-1P43699 MIR5699-201ENST00000578903 90 ntBASIC3.77□□□□□ -1.81
NKX2-1P43699 MOCS2-209ENST00000582677 741 ntTSL 5 BASIC3.77□□□□□ -1.81
NKX2-1P43699 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
NKX2-1P43699 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC3.77□□□□□ -1.81
NKX2-1P43699 AL592221.1-201ENST00000605266 382 ntBASIC3.77□□□□□ -1.81
NKX2-1P43699 AL021707.7-201ENST00000607991 416 ntBASIC3.77□□□□□ -1.81
NKX2-1P43699 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC3.77□□□□□ -1.81
NKX2-1P43699 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC3.77□□□□□ -1.81
NKX2-1P43699 AC099669.2-201ENST00000616549 437 ntBASIC3.77□□□□□ -1.81
NKX2-1P43699 AC009039.2-201ENST00000624524 529 ntBASIC3.77□□□□□ -1.81
NKX2-1P43699 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC3.77□□□□□ -1.81
NKX2-1P43699 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC3.77□□□□□ -1.81
NKX2-1P43699 MIR6715B-201ENST00000637172 77 ntBASIC3.77□□□□□ -1.81
NKX2-1P43699 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
NKX2-1P43699 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC3.77□□□□□ -1.81
NKX2-1P43699 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC3.76□□□□□ -1.81
NKX2-1P43699 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
NKX2-1P43699 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
NKX2-1P43699 MTND4P34-201ENST00000572715 1371 ntBASIC3.76□□□□□ -1.81
NKX2-1P43699 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC3.76□□□□□ -1.81
NKX2-1P43699 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
NKX2-1P43699 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC3.76□□□□□ -1.81
NKX2-1P43699 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC3.76□□□□□ -1.81
NKX2-1P43699 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC3.76□□□□□ -1.81
NKX2-1P43699 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC3.76□□□□□ -1.81
NKX2-1P43699 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC3.76□□□□□ -1.81
NKX2-1P43699 AL136964.1-201ENST00000622038 2990 ntBASIC3.76□□□□□ -1.81
NKX2-1P43699 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC3.76□□□□□ -1.81
NKX2-1P43699 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
NKX2-1P43699 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
NKX2-1P43699 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC3.76□□□□□ -1.81
NKX2-1P43699 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
NKX2-1P43699 FAM91A3P-201ENST00000456826 2544 ntBASIC3.76□□□□□ -1.81
NKX2-1P43699 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
NKX2-1P43699 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC3.76□□□□□ -1.81
NKX2-1P43699 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC3.76□□□□□ -1.81
NKX2-1P43699 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
NKX2-1P43699 AP000776.1-201ENST00000530032 1663 ntBASIC3.76□□□□□ -1.81
NKX2-1P43699 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
NKX2-1P43699 SNURFL-201ENST00000309296 343 ntBASIC3.76□□□□□ -1.81
NKX2-1P43699 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC3.76□□□□□ -1.81
NKX2-1P43699 Y_RNA.192-201ENST00000363977 102 ntBASIC3.76□□□□□ -1.81
NKX2-1P43699 DYDC1-202ENST00000372204 750 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
NKX2-1P43699 RNU6-1226P-201ENST00000384317 107 ntBASIC3.76□□□□□ -1.81
NKX2-1P43699 U3.36-201ENST00000408418 213 ntBASIC3.76□□□□□ -1.81
NKX2-1P43699 AC114755.2-201ENST00000413520 361 ntBASIC3.76□□□□□ -1.81
NKX2-1P43699 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC3.76□□□□□ -1.81
NKX2-1P43699 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC3.76□□□□□ -1.81
NKX2-1P43699 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC3.76□□□□□ -1.81
NKX2-1P43699 RPL31P54-201ENST00000429803 370 ntBASIC3.76□□□□□ -1.81
NKX2-1P43699 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC3.76□□□□□ -1.81
NKX2-1P43699 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC3.76□□□□□ -1.81
NKX2-1P43699 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC3.76□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 191.3 ms