Protein–RNA interactions for Protein: P41273

TNFSF9, Tumor necrosis factor ligand superfamily member 9, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9P41273 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC3.86□□□□□ -1.79
TNFSF9P41273 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC3.86□□□□□ -1.79
TNFSF9P41273 AC007458.1-201ENST00000542812 373 ntBASIC3.86□□□□□ -1.79
TNFSF9P41273 AC013652.1-202ENST00000561058 570 ntTSL 4 BASIC3.86□□□□□ -1.79
TNFSF9P41273 AC007993.3-202ENST00000585329 725 ntTSL 5 BASIC3.86□□□□□ -1.79
TNFSF9P41273 LINC00901.1-201ENST00000617252 152 ntBASIC3.86□□□□□ -1.79
TNFSF9P41273 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC3.86□□□□□ -1.79
TNFSF9P41273 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.86□□□□□ -1.79
TNFSF9P41273 UGT2B10-202ENST00000458688 1424 ntTSL 2 BASIC3.86□□□□□ -1.79
TNFSF9P41273 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC3.85□□□□□ -1.79
TNFSF9P41273 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
TNFSF9P41273 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
TNFSF9P41273 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
TNFSF9P41273 FRG1CP-201ENST00000358464 769 ntBASIC3.85□□□□□ -1.79
TNFSF9P41273 RNU6-984P-201ENST00000363236 109 ntBASIC3.85□□□□□ -1.79
TNFSF9P41273 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC3.85□□□□□ -1.79
TNFSF9P41273 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
TNFSF9P41273 C4orf47-201ENST00000378850 1134 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
TNFSF9P41273 RNU6-1279P-201ENST00000383917 103 ntBASIC3.85□□□□□ -1.79
TNFSF9P41273 RNU6-152P-201ENST00000384037 107 ntBASIC3.85□□□□□ -1.79
TNFSF9P41273 MIR490-201ENST00000384865 128 ntBASIC3.85□□□□□ -1.79
TNFSF9P41273 MIR218-2-201ENST00000385006 110 ntBASIC3.85□□□□□ -1.79
TNFSF9P41273 RN7SKP177-201ENST00000410567 355 ntBASIC3.85□□□□□ -1.79
TNFSF9P41273 AC013404.1-201ENST00000413068 249 ntBASIC3.85□□□□□ -1.79
TNFSF9P41273 MTND4P22-201ENST00000413116 1169 ntBASIC3.85□□□□□ -1.79
TNFSF9P41273 AL356806.1-201ENST00000422524 916 ntBASIC3.85□□□□□ -1.79
TNFSF9P41273 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC3.85□□□□□ -1.79
TNFSF9P41273 SKP1P1-201ENST00000438081 489 ntBASIC3.85□□□□□ -1.79
TNFSF9P41273 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC3.85□□□□□ -1.79
TNFSF9P41273 AC074367.1-201ENST00000438685 1125 ntBASIC3.85□□□□□ -1.79
TNFSF9P41273 XKRYP6-201ENST00000440468 1116 ntBASIC3.85□□□□□ -1.79
TNFSF9P41273 XKRYP3-201ENST00000442113 1116 ntBASIC3.85□□□□□ -1.79
TNFSF9P41273 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC3.85□□□□□ -1.79
TNFSF9P41273 AC010683.1-201ENST00000473673 378 ntBASIC3.85□□□□□ -1.79
TNFSF9P41273 NPM1P17-201ENST00000479221 602 ntBASIC3.85□□□□□ -1.79
TNFSF9P41273 AC025518.1-201ENST00000479856 347 ntBASIC3.85□□□□□ -1.79
TNFSF9P41273 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC3.85□□□□□ -1.79
TNFSF9P41273 AC005798.1-201ENST00000513715 387 ntBASIC3.85□□□□□ -1.79
TNFSF9P41273 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC3.85□□□□□ -1.79
TNFSF9P41273 AC103843.2-201ENST00000530523 682 ntBASIC3.85□□□□□ -1.79
TNFSF9P41273 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC3.85□□□□□ -1.79
TNFSF9P41273 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC3.85□□□□□ -1.79
TNFSF9P41273 AL161756.2-201ENST00000604597 246 ntBASIC3.85□□□□□ -1.79
TNFSF9P41273 AP004372.1-201ENST00000604842 844 ntBASIC3.85□□□□□ -1.79
TNFSF9P41273 U3.45-201ENST00000607547 219 ntBASIC3.85□□□□□ -1.79
TNFSF9P41273 AC055764.2-201ENST00000610089 670 ntBASIC3.85□□□□□ -1.79
TNFSF9P41273 AL158196.1-201ENST00000616786 434 ntBASIC3.85□□□□□ -1.79
TNFSF9P41273 AC015726.3-201ENST00000624501 418 ntBASIC3.85□□□□□ -1.79
TNFSF9P41273 AC096656.1-201ENST00000623826 1364 ntBASIC3.85□□□□□ -1.79
TNFSF9P41273 OTUD4P1-201ENST00000237841 3067 ntBASIC3.85□□□□□ -1.79
TNFSF9P41273 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC3.85□□□□□ -1.79
TNFSF9P41273 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
TNFSF9P41273 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
TNFSF9P41273 Z73965.1-201ENST00000623412 2297 ntBASIC3.84□□□□□ -1.79
TNFSF9P41273 CR381670.1-201ENST00000624291 1693 ntBASIC3.84□□□□□ -1.79
TNFSF9P41273 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
TNFSF9P41273 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC3.84□□□□□ -1.79
TNFSF9P41273 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
TNFSF9P41273 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.79
TNFSF9P41273 TCEAL7-201ENST00000332431 1177 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
TNFSF9P41273 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.79
TNFSF9P41273 RNU6-283P-201ENST00000364788 107 ntBASIC3.84□□□□□ -1.79
TNFSF9P41273 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
TNFSF9P41273 ZNF603P-201ENST00000405613 487 ntBASIC3.84□□□□□ -1.79
TNFSF9P41273 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC3.84□□□□□ -1.79
TNFSF9P41273 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC3.84□□□□□ -1.79
TNFSF9P41273 RPL23AP83-201ENST00000434984 473 ntBASIC3.84□□□□□ -1.79
TNFSF9P41273 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC3.84□□□□□ -1.79
TNFSF9P41273 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC3.84□□□□□ -1.79
TNFSF9P41273 RPL7P31-201ENST00000450192 724 ntBASIC3.84□□□□□ -1.79
TNFSF9P41273 PPIAP3-201ENST00000450588 505 ntBASIC3.84□□□□□ -1.79
TNFSF9P41273 U3.44-201ENST00000458938 192 ntBASIC3.84□□□□□ -1.79
TNFSF9P41273 RN7SL293P-201ENST00000481765 281 ntBASIC3.84□□□□□ -1.79
TNFSF9P41273 HMGB1P47-201ENST00000511281 589 ntBASIC3.84□□□□□ -1.79
TNFSF9P41273 SNORD116-26-201ENST00000516006 96 ntBASIC3.84□□□□□ -1.79
TNFSF9P41273 AC104997.1-201ENST00000519761 717 ntBASIC3.84□□□□□ -1.79
TNFSF9P41273 AC090150.2-201ENST00000521869 815 ntTSL 3 BASIC3.84□□□□□ -1.79
TNFSF9P41273 OR5AP1P-201ENST00000529730 940 ntBASIC3.84□□□□□ -1.79
TNFSF9P41273 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC3.84□□□□□ -1.79
TNFSF9P41273 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC3.84□□□□□ -1.79
TNFSF9P41273 AC107016.1-201ENST00000550463 337 ntBASIC3.84□□□□□ -1.79
TNFSF9P41273 AC009137.2-201ENST00000568179 641 ntTSL 3 BASIC3.84□□□□□ -1.79
TNFSF9P41273 RN7SL339P-201ENST00000580597 296 ntBASIC3.84□□□□□ -1.79
TNFSF9P41273 AC007179.3-201ENST00000604976 235 ntBASIC3.84□□□□□ -1.79
TNFSF9P41273 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC3.84□□□□□ -1.79
TNFSF9P41273 AC243654.2-201ENST00000612843 443 ntBASIC3.84□□□□□ -1.79
TNFSF9P41273 AC244258.1-201ENST00000637553 1071 ntBASIC3.84□□□□□ -1.79
TNFSF9P41273 AC017007.4-201ENST00000503353 1352 ntBASIC3.84□□□□□ -1.79
TNFSF9P41273 AP001486.2-201ENST00000561652 5113 ntBASIC3.84□□□□□ -1.79
TNFSF9P41273 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC3.84□□□□□ -1.79
TNFSF9P41273 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC3.84□□□□□ -1.8
TNFSF9P41273 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
TNFSF9P41273 ANKRD20A10P-201ENST00000457591 1515 ntBASIC3.84□□□□□ -1.8
TNFSF9P41273 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.84□□□□□ -1.8
TNFSF9P41273 HSPD1P16-201ENST00000402302 394 ntBASIC3.83□□□□□ -1.8
TNFSF9P41273 AL391417.1-201ENST00000404100 426 ntBASIC3.83□□□□□ -1.8
TNFSF9P41273 DHFRP5-201ENST00000406944 564 ntBASIC3.83□□□□□ -1.8
TNFSF9P41273 U3.39-201ENST00000408569 239 ntBASIC3.83□□□□□ -1.8
TNFSF9P41273 RNU2-65P-201ENST00000410162 185 ntBASIC3.83□□□□□ -1.8
TNFSF9P41273 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC3.83□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 113.7 ms