Protein–RNA interactions for Protein: P35453

HOXD13, Homeobox protein Hox-D13, humanhuman

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD13P35453 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
HOXD13P35453 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
HOXD13P35453 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC4.59□□□□□ -1.67
HOXD13P35453 AC090506.2-201ENST00000624521 419 ntBASIC4.59□□□□□ -1.67
HOXD13P35453 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC4.59□□□□□ -1.67
HOXD13P35453 ZNF663P-202ENST00000641770 1131 ntBASIC4.59□□□□□ -1.67
HOXD13P35453 MAPK10-253ENST00000641010 4072 ntBASIC4.59□□□□□ -1.68
HOXD13P35453 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC4.59□□□□□ -1.68
HOXD13P35453 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC4.59□□□□□ -1.68
HOXD13P35453 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC4.59□□□□□ -1.68
HOXD13P35453 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC4.59□□□□□ -1.68
HOXD13P35453 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC4.59□□□□□ -1.68
HOXD13P35453 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC4.59□□□□□ -1.68
HOXD13P35453 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
HOXD13P35453 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC4.58□□□□□ -1.68
HOXD13P35453 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC4.58□□□□□ -1.68
HOXD13P35453 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.58□□□□□ -1.68
HOXD13P35453 RNU1-85P-201ENST00000364127 164 ntBASIC4.58□□□□□ -1.68
HOXD13P35453 RNU6-115P-201ENST00000364310 107 ntBASIC4.58□□□□□ -1.68
HOXD13P35453 U3.15-201ENST00000365398 212 ntBASIC4.58□□□□□ -1.68
HOXD13P35453 RNU6-224P-201ENST00000384055 107 ntBASIC4.58□□□□□ -1.68
HOXD13P35453 MIR124-3-201ENST00000384866 87 ntBASIC4.58□□□□□ -1.68
HOXD13P35453 MIR1179-201ENST00000408703 91 ntBASIC4.58□□□□□ -1.68
HOXD13P35453 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC4.58□□□□□ -1.68
HOXD13P35453 RPS12P23-201ENST00000419579 400 ntBASIC4.58□□□□□ -1.68
HOXD13P35453 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC4.58□□□□□ -1.68
HOXD13P35453 COX6B1P7-201ENST00000430845 235 ntBASIC4.58□□□□□ -1.68
HOXD13P35453 B3GNT2P1-201ENST00000434960 952 ntBASIC4.58□□□□□ -1.68
HOXD13P35453 NDUFA5P7-201ENST00000452914 242 ntBASIC4.58□□□□□ -1.68
HOXD13P35453 MRPL42P4-201ENST00000453267 443 ntBASIC4.58□□□□□ -1.68
HOXD13P35453 RPL37P6-202ENST00000464216 403 ntBASIC4.58□□□□□ -1.68
HOXD13P35453 AC087385.1-201ENST00000475062 312 ntBASIC4.58□□□□□ -1.68
HOXD13P35453 RAD51AP1P1-201ENST00000484195 1001 ntBASIC4.58□□□□□ -1.68
HOXD13P35453 ALDH7A1P3-201ENST00000492517 345 ntBASIC4.58□□□□□ -1.68
HOXD13P35453 PRELID3BP6-201ENST00000503839 571 ntBASIC4.58□□□□□ -1.68
HOXD13P35453 AC011352.3-201ENST00000505162 593 ntBASIC4.58□□□□□ -1.68
HOXD13P35453 AC025554.1-201ENST00000505641 188 ntBASIC4.58□□□□□ -1.68
HOXD13P35453 AC006499.6-201ENST00000511169 607 ntBASIC4.58□□□□□ -1.68
HOXD13P35453 AC093840.1-201ENST00000511599 336 ntBASIC4.58□□□□□ -1.68
HOXD13P35453 AC109471.1-201ENST00000511631 612 ntBASIC4.58□□□□□ -1.68
HOXD13P35453 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC4.58□□□□□ -1.68
HOXD13P35453 MTND1P6-201ENST00000523621 946 ntBASIC4.58□□□□□ -1.68
HOXD13P35453 AC105233.3-201ENST00000531125 744 ntBASIC4.58□□□□□ -1.68
HOXD13P35453 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
HOXD13P35453 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC4.58□□□□□ -1.68
HOXD13P35453 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC4.58□□□□□ -1.68
HOXD13P35453 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC4.58□□□□□ -1.68
HOXD13P35453 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC4.58□□□□□ -1.68
HOXD13P35453 AC063947.1-201ENST00000549036 557 ntTSL 4 BASIC4.58□□□□□ -1.68
HOXD13P35453 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC4.58□□□□□ -1.68
HOXD13P35453 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC4.58□□□□□ -1.68
HOXD13P35453 AC063950.1-201ENST00000552036 308 ntBASIC4.58□□□□□ -1.68
HOXD13P35453 TVP23BP1-201ENST00000557500 617 ntBASIC4.58□□□□□ -1.68
HOXD13P35453 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC4.58□□□□□ -1.68
HOXD13P35453 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC4.58□□□□□ -1.68
HOXD13P35453 AC022655.2-201ENST00000577280 318 ntBASIC4.58□□□□□ -1.68
HOXD13P35453 KPNA2P3-201ENST00000584190 848 ntBASIC4.58□□□□□ -1.68
HOXD13P35453 AC006116.5-201ENST00000591936 559 ntBASIC4.58□□□□□ -1.68
HOXD13P35453 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC4.58□□□□□ -1.68
HOXD13P35453 AP003973.1-201ENST00000604639 691 ntBASIC4.58□□□□□ -1.68
HOXD13P35453 AP005137.2-201ENST00000609238 400 ntBASIC4.58□□□□□ -1.68
HOXD13P35453 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC4.58□□□□□ -1.68
HOXD13P35453 AC005962.2-201ENST00000611427 652 ntBASIC4.58□□□□□ -1.68
HOXD13P35453 AL592148.2-201ENST00000612210 372 ntBASIC4.58□□□□□ -1.68
HOXD13P35453 AL023881.1-201ENST00000621088 301 ntBASIC4.58□□□□□ -1.68
HOXD13P35453 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
HOXD13P35453 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
HOXD13P35453 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
HOXD13P35453 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC4.58□□□□□ -1.68
HOXD13P35453 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC4.58□□□□□ -1.68
HOXD13P35453 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
HOXD13P35453 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
HOXD13P35453 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC4.58□□□□□ -1.68
HOXD13P35453 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
HOXD13P35453 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
HOXD13P35453 AP000542.2-201ENST00000623199 6179 ntBASIC4.57□□□□□ -1.68
HOXD13P35453 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC4.57□□□□□ -1.68
HOXD13P35453 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC4.57□□□□□ -1.68
HOXD13P35453 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
HOXD13P35453 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.57□□□□□ -1.68
HOXD13P35453 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
HOXD13P35453 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
HOXD13P35453 CREM-201ENST00000337656 900 ntAPPRIS ALT1 TSL 5 BASIC4.57□□□□□ -1.68
HOXD13P35453 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
HOXD13P35453 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC4.57□□□□□ -1.68
HOXD13P35453 SSXP10-201ENST00000402595 565 ntBASIC4.57□□□□□ -1.68
HOXD13P35453 RSL24D1P1-201ENST00000404972 493 ntBASIC4.57□□□□□ -1.68
HOXD13P35453 MTCO3P31-201ENST00000405526 789 ntBASIC4.57□□□□□ -1.68
HOXD13P35453 RN7SKP182-201ENST00000410772 298 ntBASIC4.57□□□□□ -1.68
HOXD13P35453 RPS3AP9-201ENST00000417027 792 ntBASIC4.57□□□□□ -1.68
HOXD13P35453 OFD1P2Y-201ENST00000421895 1149 ntBASIC4.57□□□□□ -1.68
HOXD13P35453 EIF4EP1-201ENST00000422311 642 ntBASIC4.57□□□□□ -1.68
HOXD13P35453 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC4.57□□□□□ -1.68
HOXD13P35453 AL353681.1-201ENST00000435828 731 ntTSL 3 BASIC4.57□□□□□ -1.68
HOXD13P35453 AL358794.1-201ENST00000445689 381 ntBASIC4.57□□□□□ -1.68
HOXD13P35453 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC4.57□□□□□ -1.68
HOXD13P35453 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC4.57□□□□□ -1.68
HOXD13P35453 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC4.57□□□□□ -1.68
HOXD13P35453 PPIAP3-201ENST00000450588 505 ntBASIC4.57□□□□□ -1.68
HOXD13P35453 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC4.57□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 106.2 ms