Protein–RNA interactions for Protein: P29400

COL4A5, Collagen alpha-5(IV) chain, humanhuman

Predictions only

Length 1,685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5P29400 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC3.89□□□□□ -1.79
COL4A5P29400 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC3.89□□□□□ -1.79
COL4A5P29400 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC3.88□□□□□ -1.79
COL4A5P29400 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC3.88□□□□□ -1.79
COL4A5P29400 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
COL4A5P29400 HMGN2P8-201ENST00000391458 268 ntBASIC3.88□□□□□ -1.79
COL4A5P29400 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
COL4A5P29400 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC3.88□□□□□ -1.79
COL4A5P29400 OFD1P11Y-201ENST00000418213 1177 ntBASIC3.88□□□□□ -1.79
COL4A5P29400 OOSP1P1-201ENST00000423265 274 ntBASIC3.88□□□□□ -1.79
COL4A5P29400 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC3.88□□□□□ -1.79
COL4A5P29400 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC3.88□□□□□ -1.79
COL4A5P29400 Y_RNA.638-201ENST00000459374 113 ntBASIC3.88□□□□□ -1.79
COL4A5P29400 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.88□□□□□ -1.79
COL4A5P29400 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC3.88□□□□□ -1.79
COL4A5P29400 RPL12P22-201ENST00000519073 490 ntBASIC3.88□□□□□ -1.79
COL4A5P29400 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC3.88□□□□□ -1.79
COL4A5P29400 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.88□□□□□ -1.79
COL4A5P29400 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC3.88□□□□□ -1.79
COL4A5P29400 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC3.88□□□□□ -1.79
COL4A5P29400 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC3.88□□□□□ -1.79
COL4A5P29400 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC3.88□□□□□ -1.79
COL4A5P29400 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC3.88□□□□□ -1.79
COL4A5P29400 FAM35BP-202ENST00000497389 3337 ntBASIC3.88□□□□□ -1.79
COL4A5P29400 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
COL4A5P29400 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
COL4A5P29400 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC3.88□□□□□ -1.79
COL4A5P29400 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
COL4A5P29400 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.88□□□□□ -1.79
COL4A5P29400 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
COL4A5P29400 OR5B17-201ENST00000357377 946 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
COL4A5P29400 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC3.87□□□□□ -1.79
COL4A5P29400 AC006989.1-201ENST00000427212 131 ntBASIC3.87□□□□□ -1.79
COL4A5P29400 FAM53B-AS1-201ENST00000432699 558 ntTSL 2 BASIC3.87□□□□□ -1.79
COL4A5P29400 FCF1P3-201ENST00000496394 590 ntBASIC3.87□□□□□ -1.79
COL4A5P29400 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.87□□□□□ -1.79
COL4A5P29400 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC3.87□□□□□ -1.79
COL4A5P29400 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC3.87□□□□□ -1.79
COL4A5P29400 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC3.87□□□□□ -1.79
COL4A5P29400 uc_338.25-201ENST00000613756 156 ntBASIC3.87□□□□□ -1.79
COL4A5P29400 AL162574.2-201ENST00000614618 657 ntBASIC3.87□□□□□ -1.79
COL4A5P29400 AL513314.2-206ENST00000617276 434 ntTSL 5 BASIC3.87□□□□□ -1.79
COL4A5P29400 AC233309.1-201ENST00000619522 751 ntBASIC3.87□□□□□ -1.79
COL4A5P29400 AL356321.1-201ENST00000621360 228 ntBASIC3.87□□□□□ -1.79
COL4A5P29400 AL672296.1-201ENST00000427780 2158 ntBASIC3.87□□□□□ -1.79
COL4A5P29400 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.87□□□□□ -1.79
COL4A5P29400 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
COL4A5P29400 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
COL4A5P29400 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
COL4A5P29400 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
COL4A5P29400 RABGAP1L-205ENST00000367687 1849 ntTSL 2 BASIC3.87□□□□□ -1.79
COL4A5P29400 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC3.87□□□□□ -1.79
COL4A5P29400 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
COL4A5P29400 USP12PY-201ENST00000427677 1064 ntBASIC3.87□□□□□ -1.79
COL4A5P29400 AC108938.1-201ENST00000451204 136 ntBASIC3.87□□□□□ -1.79
COL4A5P29400 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC3.87□□□□□ -1.79
COL4A5P29400 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.87□□□□□ -1.79
COL4A5P29400 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC3.87□□□□□ -1.79
COL4A5P29400 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC3.87□□□□□ -1.79
COL4A5P29400 AC103881.1-201ENST00000603476 538 ntBASIC3.87□□□□□ -1.79
COL4A5P29400 AC063952.1-203ENST00000634410 658 ntBASIC3.87□□□□□ -1.79
COL4A5P29400 CASC15-208ENST00000636388 1174 ntTSL 5 BASIC3.87□□□□□ -1.79
COL4A5P29400 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC3.87□□□□□ -1.79
COL4A5P29400 ZNF826P-207ENST00000622273 1910 ntBASIC3.86□□□□□ -1.79
COL4A5P29400 DLD-204ENST00000437604 1859 ntTSL 2 BASIC3.86□□□□□ -1.79
COL4A5P29400 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC3.86□□□□□ -1.79
COL4A5P29400 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
COL4A5P29400 SNORD67-201ENST00000390833 111 ntBASIC3.86□□□□□ -1.79
COL4A5P29400 EEF1A1P41-201ENST00000414667 207 ntBASIC3.86□□□□□ -1.79
COL4A5P29400 AC007161.1-201ENST00000418534 1061 ntTSL 3 BASIC3.86□□□□□ -1.79
COL4A5P29400 AF228730.2-201ENST00000438784 848 ntBASIC3.86□□□□□ -1.79
COL4A5P29400 AL357552.1-201ENST00000445254 415 ntBASIC3.86□□□□□ -1.79
COL4A5P29400 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC3.86□□□□□ -1.79
COL4A5P29400 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
COL4A5P29400 AK5-208ENST00000478255 556 ntTSL 2 BASIC3.86□□□□□ -1.79
COL4A5P29400 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC3.86□□□□□ -1.79
COL4A5P29400 AC009812.2-201ENST00000517657 457 ntBASIC3.86□□□□□ -1.79
COL4A5P29400 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC3.86□□□□□ -1.79
COL4A5P29400 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC3.86□□□□□ -1.79
COL4A5P29400 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC3.86□□□□□ -1.79
COL4A5P29400 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC3.86□□□□□ -1.79
COL4A5P29400 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC3.86□□□□□ -1.79
COL4A5P29400 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC3.86□□□□□ -1.79
COL4A5P29400 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
COL4A5P29400 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC3.86□□□□□ -1.79
COL4A5P29400 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
COL4A5P29400 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC3.85□□□□□ -1.79
COL4A5P29400 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC3.85□□□□□ -1.79
COL4A5P29400 AL022311.1-201ENST00000623726 19416 ntBASIC3.85□□□□□ -1.79
COL4A5P29400 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC3.85□□□□□ -1.79
COL4A5P29400 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
COL4A5P29400 AC005183.1-201ENST00000603687 1979 ntBASIC3.85□□□□□ -1.79
COL4A5P29400 FTLP6-201ENST00000355274 422 ntBASIC3.85□□□□□ -1.79
COL4A5P29400 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
COL4A5P29400 AL512641.1-201ENST00000427232 548 ntTSL 3 BASIC3.85□□□□□ -1.79
COL4A5P29400 AC105272.1-201ENST00000438604 198 ntBASIC3.85□□□□□ -1.79
COL4A5P29400 RPL37P4-201ENST00000448908 268 ntBASIC3.85□□□□□ -1.79
COL4A5P29400 DNAJC19P8-201ENST00000452887 259 ntBASIC3.85□□□□□ -1.79
COL4A5P29400 LINC01995-201ENST00000489016 621 ntTSL 3 BASIC3.85□□□□□ -1.79
COL4A5P29400 C8orf22-203ENST00000517663 788 ntAPPRIS ALT1 TSL 5 BASIC3.85□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 83 ms